XLOC_037316 (gene) - C. hemisphaerica

Overview
NameXLOC_037316
Unique NameXLOC_037316
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_321:1543..5281+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037316 ID=XLOC_037316|Name=XLOC_037316|organism=Clytia hemisphaerica|type=gene|length=3739bp|location=Sequence derived from alignment at scaffold_321:1543..5281+ (Clytia hemisphaerica)
ttttgtattcatTGCAAAAGAAAATATTCCAAATCAGTATTTTACCGATC
TCACAATAATCGGAAATGTCAAACAAAGAAGATGGTTTTGGATCCTCCAA
ATATTCTCATAGAAGATGGGAATAATAATTATGATGATCCCAATGATGCA
GAAGAGAATGAGTATAATCATGATGACAATGTCTCAGGTATACGAAAACA
ATTCAGTAGGGTGTTTGAAAGACAATATTTTTAGTCAAGCTGTATTAGTT
TGTTTAATATTTACATTATGGGAATATATAATCTTGACATTAAAGGGATC
AGATAGTTTTTTTATATTCGACCTAAAGATGTCTCCGATGATGGTCCTGA
GAAAAACCTTCAAACTTTTTGAcccaattatttttcaaagctaAGATATT
TGATTTTATAATGTGTAAAATTTAGTCTTCACACGCCTTTACGATAAATT
tatattgttttcaagcaaaaatatcaatttttgaagGTCTTTCTCAGAGC
TATGGGAGATATTTGTCagtgaaatataaaaaactacCTGATTATCTCCC
TTTAACTATCGCATCtagaaaatttaatcaaatcaacactgtatttcaac
aattttcatttgttaaagATAATGAACAAGATGCACCAGAAGACAGTGGA
AATGATCAAAACTCTGACGAAAATGATGTGGAAGACGATTTTCCTCAAGA
TCAACCTGAAGATGTAAACTGtcttttataactttttgaacACAGCCTTG
CTTGCTTTTTAGGTTTTGAAAACtttctaattcaaattcaataacAATAT
TTGGAATAGCAATTTCTGAATACTAAGGCAAACAACCAATTGTGTCATTT
GCCAAGACATATCTTTGTTAAACAATCTGGACATTATGCTCATTCGCctg
ttgtattttttttctgaacttgTTTATTACCAAACAATTgaaatttactt
taatttttaagGTTATAACGGAGGTGTGGGACGAAGAAGAAATTCCTGAT
TTTTTTGAGGAGGAAATAGAAGAAGAATACAGTGAAAGCTACCGAAAAGT
ATCAAGTGCACTTAAAGAATTACTGAAATGGCAATTGAAGTATTCTGTTT
CTGATGGATGCCTTAATGCCCTCTTAAAGGTGATAAAAGTTTTCTTGGCA
GCACTCAACGTAGTTATCAACTCTAACTTCCTTACCGAAGTATTGGAGCT
TTTACCAGAGACTCTTCACAGCCTTAGAAAAGTTACTGGAATCAACAGGG
ATGATTTTGACCAATATATTGTTTGCCCTGAATGCAACTCACTTTATAAG
AAGGAAGATGTACTTGTTATTGGTTCAGGTAAGCACTCTTTTTtgttatc
atataacacccatgTTTCTTGACCCGATGGAAAACTCCAATCAAATGGAT
TAACATAAAGGAACTAAATGCTTTCAATTTACAacaagatgaaatttttt
tggatAGGGACTTAAGCTGAATGTTACCAATATTCTTTTCTCAATTGGAG
TTAGATTTTACTGCAGTTCTCCAATGAGGATCAAGtttcagggtattttt
atcACCTTGACAATCTTTTGGCCTTTTATCTAAGGGATAATAAAGGGTCA
TATCGGATCCACCAGGTCTGTAATACAAGCCTGCAATACTTAAAAATAAA
TCCAGGACTAAGTCTAAGATTTATGAATGCTTTCACCTTTTAGCTCTTTT
TCGAAAATGGGATTAAAACAATTCGCTTCATAACATAAGGATGAATCACT
CTATAATCGATCAAAtctacttgtttttttttttctacagatGGCAAACC
AAAAGCAAAGAGATGTTCGTACGTACCGTTCAAACACCACCCTCAAAAAA
GATTCCGCACCCCATGTAACGCAGAGTTGCTGAAGAAAATATCAAATGCT
AgtggaagtaaagaaaatttttatccaAAGAAAGTTTATTGTTATCGTGG
CATTAAAAGATCGTTCCAGGAAAAGCTATTGAGGAaaggatttttggaaa
atttgctCTCTGCACCACAACGTTCATCGAAATATTCTGATATTTACGAT
GGAAAATATTATTCTGAGTTCAAAGATGCTGATGATTTACCATTCTTCAA
CGAGAAAAGAAACATTGGGCTTCTTGTGAACTTCGACTTTTTTAATCCGT
TTAAAAAATCCAAGTATTCACTTGGAGTTGTGTATGCTGTAATTGTTAAC
CTACCACGTAAAGTCAGATTTTTGTGGGAAAATGTTTTGGTATTGGGGAT
CATACCGGGACCAAGAGAACCAAAATTACATATTAATACATATTTACGTC
CATTTGTCGATGAACTTCTTATAGCCTGGTCTCCTGGTATCAAACTGGTG
GAGCCAGATGGTTTAAGTGCACAATACCAGTTTGGCCTTTTCTCTTTGTC
GTGTGACTTACCAGCACTTCGTAAAATTGGAGGATTCTTATCTCATAATG
CAAAACAAGGTAAATCACAAACGTTACACCAATTTGTTGCGATTTTCTTT
TCAGCGTTAACTTCTTTTGTTTCTAGCTTGTTTTGGCATTAATTGTAGAT
ATACTTTCAGGTTCAACTCAACAATAGGTAATTTAAACATTCAAATGTgt
gtttgttcttgtaaaatgatATCGTCATCTGGTACTTCAGCCACGAAAGA
ATTCGATTcgattcattctttttttaaatgcttCTTTTTTTAGGATGCAG
TAAATGTACTACTAACTTCACAATCGATACAAAGTCGGAAAATGTACGCG
ACATTGGTGGTTTCGATCAGACAAAATGGACAGCAAGAAATGGTGAAGAT
CATAAGTCAGCTGGATTTGCTTTGTTACAACACAACACGCTAGAGAAAGT
CAAAACAGAAGAAAGAAGGACTGGAGTTCGATTTAGTGAACTTTTCCGCC
TCACTTATCATGATCCTATTCGCGGCCACGTCATTGATCCAATGCATAAC
TTGTTTTTGggtaagaaataaaaaattttcaaacattcctTTGTTCAGTT
ATTATTCATTCTATATTGTTTGATTTAGCCGGTATTTCTCCATCAATTCG
TCAAAACTGCCGACGACTTTTAACTACCTAACTCTAAGTGATTTGCAATG
AACAATTATAAATTATATGGCTCAAGTAAACTGATCACGAAAATTTGAAT
TAGGTTAATAGAAAAGTGAATTTCTATGGCAAGGGAAGCATAGTTTTGTA
TTGCCCTACTGACTGACAATTTTACAATATGGGACATTCATTGAGACAGA
GATGTAAGTAACTTTAATTTTCAATCTATTTTTAGGAGTAGCGAAACATG
TGTTTAATGTATGGGTGGAGACCGAAACTTTGAACAAAACAAACTTCGAC
ACCGTTACTGCGAGGCAAGAAAAGTTACGGATTCCCTCTGATGTTGGGCG
TATCGCTAAGTCTGTCAGTGAAAACTACAAGACTCTAAAAGCTGACGAAT
GGAAACACTGGACGATGGTTTATTCCATCTATTGTCTAAAGGACCTGATT
CCAAGACGTGATTTGGTTATTTGGAGTTACTTTGTTCGAGGTTGTTTTCT
GATTTGCAGACCGGTCATTACGGAGAAAGACATCAAAGATGCCCatgatc
tttttgaaaggttttgtacagatttcgaaaaaagataCGGTTCGATCTAT
CTTGTTCCTAACTTGCATATGTCATTGCACATCAAGGAATGCCTTAAAGA
CTTTGGTCCTGTGTATGCATTTTGGTGCTTCGGTTTCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059263TCONS_00059263Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059263-proteinTCONS_00059263-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_321supercontigscaffold_321:1543..5281 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.19	0.09	0.15	0.73	0.95	0.5	0.37	0.39	0.59	0.12	0.58	0.22	0.28	0.08	0.14	0.04	0.06	0.06	0.02	0.11	0.14	0.13	0.22	0.96	1.06	0	0	0.06	0.02