XLOC_037310 (gene) - C. hemisphaerica

Overview
NameXLOC_037310
Unique NameXLOC_037310
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_320:233915..240649-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037310 ID=XLOC_037310|Name=XLOC_037310|organism=Clytia hemisphaerica|type=gene|length=6735bp|location=Sequence derived from alignment at scaffold_320:233915..240649- (Clytia hemisphaerica)
TAAACGATTTATATCAGCATTTCCAGAACAACAACATCGAGTCCCACATG TATGCTTCACAATGGTTCTTGACCTTATTCACAGCCAAGTTTCCGCTTTC CCTGGTTTTCAATATCATTGATATCATCTTTTGTGAGGTATGTACGCTTA AACCTGTTACAATGCGATTTCCTTTTCATGTTAACCCGGCATTGTACAGT GGAGTCTCTTTGATCCGAACCTTTAGATCTCAAGTTTTCTAGTCCTTTCA GTTAACAATGCCTTATAAACCTTACTTCATAACTCGAAAATCTCCTTAAC TCGAACAAACTTGCGTTTTCCGTGCGTGTTAGAGTTTTGGAGACTCTACT GTAGCACCCCTTTAACTTGATATTGATCTAGGTGCAAATTATTTGAACTT TTTTCCGTGCAACCTTTTCCCTGGATTGTATTGGATTAGACATTATTCTG ATTTAAATAATTTCACCGCTTGTTTATTTTCAGGACCTTGATTCAATTTT CCAAATAGCTGCTGCACTTCTAAAGGTAAATTCAAGTATGCATGTGACGT ATCTTTCCGCGAAACTCGGTTTAACTTTATCTATTACTTACTGGTAGACA ATGTTCTAGTCAAAAATGTCGTCAAAAACCGTCAAAAGTTAGCCACGGCG TTTTGATTCTTAACCTAGTCTAGCTCACTGGACATATAATTTACTCGTTT TCCGCTATTTTTCTTGGTTACAATCTTCTATCTTTCTAATTTTCAGACAG CACGGAAGGATTTACTACAATTGGATTTCGAAGGGATATTAAAATACTTT CGTATCAACATGCCAAAATATTACATGTTGGAACCACACAGAAAAGATCT TGTCAAAACTATCTACGATATTAAGGTATCATTTGTTAGAGCTCTGATAA AAATCCTACACGATTCAAGCAAACGTTATGAATCCGGCAAATTATTAAGA TTTGTCGAAGATCACAAGGTTTTCTTACTTTACACTAAGGCTATTATACA GTGAACTTTCCAATTGGGTCTTAAAGGTATTAAGGTTGTTTTTTTTGAAT CGGAAAAATGTTATCTCTTGTAGAGCTTCTTGGCTGAAGGTACCATAGAT TTAGTTCGAGCTACAAGAAGGCTTGAAGCAGATTAAAATTAGAAAAAATC AACTGTGTACCCTGATTTAGGATCACCATATACCCAAACTAATTGTCTGA AATGCAGACCTCTATAGATATACTTCCTATACAAAAAACTCTTTTCGCTA GAGCATGAGCAGAAGCCTGCCGTGCATGTGACGTTGTTTGGAGGGCGTTG TAATCTTTTAGATTACCTTTGCCCATTGTGGATTTTGTTATAAACAACTT GGTTTCTGTATTCAGCTTACTGAAGATTAAAGAATTTTTATGCTAAAAAA GCATAAGCAGAAGCCTGCCAAACTAACTTCTAAACAAGTTTCCATTAATC TAATAAAATTCATTTCATCCATGGGGACGAGATGGAGTTTTTACAAGCTC TTATTTGATTTGGTTGGTCGTTAACCAGTAATAAAACAATAAAGAAGGCG TCATTTTTGTCCATCCATATCCATCCATCATGATTTCTCCCTCATTCATT AGATTTCCAAGAAGAAGGTGACCAAGTACAAACAAGAATACGTTCAAATG AAGGAAGAACAAGAACTAAAAGAAGACCCTGTGGAAAGATTAAAGGTTAG ATTTGATATTGCTGCTTTCACTCTGGGATAAAGTCTCGTTACTTTGGTAT CATTATTCCACTAAAAGATTGAAAATGAAAGTTTTTGATCCCGCAACGCC CTTTCAACGCCCTTTTGAAGGGCAGAACTATGCCTCAAAAAAGTTATCTT TGCCTTCAATAGTGTAGGGATGCCGGGCTGAGATTTGTATCCTATTCTAC TCCTAATAGAGTCCCGGTACCAGTGTCTCTAATACTATTAACCAGTAATG ATAATGCCAGATAACGTCGAGTTGATTATTGTGAGGCATTATTAAAAACC TTAGTTCTATCCATTTTAATATTTTTCATTCTTCCTATCTGTTTTAGAGA GAAAATGGTGAACTTCAAATGGAGAAATTACGCTTAGAACGTGAGAATGA CAGTTTAGCATACGAAGTTGTCACAACTCAAGTCTCAATGCAAGAAATCA TCACTGATGTATACTTTTTGTTCATTTTTGGTCCTTTTGCGTCTTTCCTA TTACATTTTTTCTAAATTCTTTTTTCTTGGCATTACTCGTTAAAGTCGCC ACATTTAGCCTTTTTTCAAAAGGAAACCGCCCTGGAATTTGGGTTCACTT AAGGTGTTTTAGATTGGCTTTTTATCTTTGGACTTGAAATCTGTATATAG CTCCCTACAGTTGACTTTCTCTCCCTCTCTGATCTCTATCATCCGAATCT TTCTGTAATCCAAGCTAGTACATTGGTCACCTGACCTGGAAATTCGTATA AATTACTCTCCGTAATGATAATCTTTCCCTAATTCGAACAAGAAAGTTTG GCCCCTTGAAGCCTTTTGGATTTCTGACCTCGATTTTGTTTTCATTTTCC GCAGAGAGAAGAGAAATTGAACGAGATGATTAAAGAAACGGAACAATTAC GTAATCATTTAACTGACGCCGAAGAAGAAGCGGAAAGACTGAAAGTTGAA GAAGCAAGGGTATAAAAGTTGTTTTGTGTTTTGTTTGTTATCTTTTTCAG ATATTTTCGCTGTTCCTATTACCAAGAATGGTCTTAAGTGTTGGACCGGC ATGATTTTGAAACAATTTACACTTGATCTTTATCAGTTTGATGTTGTTTC AAGGATTTTGTTGCCTAGGTTATATAACCTAGTTATCCACGAGCTGATAT TTTTGGTGCTTACAATTTGACTTATAGAGACATTTTCTTGACCATAATTT ACATAATAAACTTGTTTCATTCATTCATTCAATCATTCGTTCATTCATTC AATCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCAT TCGAGCGGTAACAATAATGGTTTATTATTTTTCTTTCATATTCAGGTCAA AGACATGTGGCGTGATAGCATGAGACAGGCTGATGAAAATAAAGCAAAAC TAAATCGAATCATTGATGATTATAAACAGGTACTATTATAGCCTGTCTAC GTTTATTCTTACTCATTCTTCTTTTGTTTTAATCCCTCACCCCTACCAGT CGACAAAACTATGTGATATCGAAATACTAAAATTGGTTGGCAGTGTTGCC CAAAATATTCCGAACTGATTCGAAAACAACTATAACACTGAAAAAATGGT TCACCAAAAGCTCCTGCATGTTGTGATGGTAAATGTTTGCATATTTTTAC ATAATTTCAGACTCCCTCAATCCCCGAGTTTTCCAGGGTTTTCAGGTACA CCTTTACAGATATATGACCTTCCCAATATGAGGGGTTTTACTTGAGCCCA GTCGTAGGGATGCTTGAGAATGGCTTCTGTTTCCATTGCTAAGTCTCACG TTTTACGTATACTTCATTTCCCTACTTTAGATTTTGGCTCGACTAGAAGA ACGCAACGAAAAATTAAAACGAGATTTCACTGCTGAAACAGAACTGCTGA AGGTAAGGAGAAATGAAATAGGTCCATAGTTTATCCTATATTTCGATCTC AACAAAGCCTTCTTCTATCAAAATCTATCATTTTCATTTGAAAAAAAAAT TGATTTGAACCGAGATCATGAGACGTAGGTCCAGCAGCGTTTTGCTTACT TTTGTTTGAGACTGTTTTCTGGCTTCATTTCTCATTTTGGAAAAATATGA TAGACATTTTATTCTCAGTGTAAAGAGATTTTTCAAGTTGGCTAAACATA CAAAATTATCAGTATCAATCTTCATAAGGAATCGTTTCTTCAAAATCGAA TGTTTTCATCAATAATGAGGGGTTTTCCTGTATGTAACACAACCTTGCTC TATTATAGACCTCTATTATAGAATCAGGTCAAATTTGGGAAATTCTTAAC TTTCACCATTGTTCATGGCACTTTTTCAATGATTCTTCCAATCTTCTTTA TAGAAACAGTTATCAACGTGCGAGAACTGTACGAACGCTTTGATGAAAAA CATTTATCCAGACGAGGATGACAAGGGCGGACCGAGAGAACCAACCATCA CTAAATTACTCTCCAAAGAGGATCACGAAGAACAGATGCGTAGCTTAGAA GAAGAGCTCATTAAAACAAAAGTCGCACTGGCGGAAGAAAAAAATCGCGC GGACGAAATCGAAATGAAATTACACAATTTGATGAGTGCGAACGAGAAGC CGTGGTATAAGAAGGTAACTGTGATTAAAAAATAGTATTGTTTTGGAAAT TTGTTTGTTTGTTTGTTGTTTGAAATTAGTTGTATATAATTATTATAAAT AGCTCTCTAACTCTCCTATTATAAAATGTTATCAAAATTGCTGCTTCGAT AGAAGTTTAGTTTTTCTCGTGTAGCAAATCTTTGGTTTTTGTTACTCAGA GCATATTTACGTGTGTAGTCCACTCTGAGATATTCTGAAGTTTACCAAAA TTGTGACTTTTTTACACTTTTTTCACTAANCATAGTTTATCCTATATTTC GATCTCAACAAAGCCTTCTTCTATCAAAATCTATCATTTTCATTTGAAAA AAAAATTGATTTGAACCGAGATTATGAGACGTAGGTCCAGCAGCGTTTTG CTTACTTTTGTTTGAGACTGTTTTCTGGCTTCATTTCTCATTTTGGAAAA ATATGATTAGACATTTTATTCTCAGTGTAAAGAGATTTTTCAAGTTGGCT AAACATACAAAATTATCAGTATCAATCTTCATAAGGAATCGTTTCTTCAA AATCGAATGTTTTCATCAATAATGAGGGGTTTTCCTGTATGTAACACAAC CTTGCTCTATTATAGACCTCTATTATAGAATCAGGTCAAATTTGGGAAAT TCTTAACTTTCACCATTGTTCATGGCACTTTTTCAATGATTCTTCCAATC TTCTTTATAGAAACAGTTATCAACGTGCGAGAACTGTACGAACGCTTTGA TGAAAAACATTTATCCAGACGAGGATGACAAGGGCGGACCGAGAGAACCA ACCATCACTAAATTACTCTCCAAAGAGGATCACGAAGAACAGATGCGTAG CTTAGAAGAAGAGCTCATTAAAACAAAAGTCGCACTGGCGGAAGAAAAAA ATCGCGCGGACGAAATCGAAATGAAATTACACAATTTGATGAGTGCGAAC GAGAAGCCGTGGTATAAGAAGGTAACTGTGATTAAAAAATAGTATTGTTT TGGAAATTTGTTTGTTTCTTTGTTGTTTGAAATTAGTTGTATATAATTAT TATAAATAGCTCTCTAACTCTCCTATTATAAAATGTTATCAAAATTGCTG CTTCGATAGAAGTTTAGTTTTTCTCGTGTAGCAAATCTTTGGTTTTTGTT ACTCAGAGCATATTTACGTGTGTAGTCCACTCTGAGATATTCTGAAGTTT ACCAAAATTGTGAATTCTAACTTTTTTACACTTTTTTCACTACCAACTTA TACGAGTATTAAAATACACCTTTTCGACCGTAACCAATTGCCGCGCGGGC ATTTTTTTGTCCACTTTATCCCGAGTTTAGATCGAGTTTAGGGGGATAAT TACTGACCGCGCGACTACGGTCGAAAAGGTGTATATCTCCCCCTCCCCCT TCCCCGAAAAAAAAAACAAAAAAACGTGTGGACCGCAATGCACTTTGCTG TTTAAATGGAAATTTCGAGATTTTCATATTTTTAAAATTTAGTGTGTATT TATTTCTAAAAGCAGAAAAAGTATAGATATTTCTATTTTTATACTACATA CAAGAAATAAAATTCGTTTCGAAATTCTCGCGATTCGACGGATTTTATTT TTTGTCTTCATTTTTTTACGAAAAACAAATTATTTAGTTTTCAAATTGAA TTTTTTTTTCTGTTGCTTTTAGAAGCATTACATTGTTTTCCTTGTTTTGT GTTTTTCTTTTTAGATGTTATTTGTCAGTTAGTCCTTTTATATTAACTCT TCACTGTTCTTTTCTTTTTTTCTCTCGTCCCTTAGCCTAAAGTAGACGTC ACATGCGTTTTTTCTATGCAATTAACGTATATTCCACTTTGCGACTTTTT CGAATGTTTGGAGCTCAGATTTTTGGAACTTTCGAAGCGGTGTCGAGGAA AAAGCTGTGGTCATCTGGTACAGACAATCAAAGCTCTAGCGAACACCTCA CTAAAAACCGGGATTTTTCATCTCGTTTCTTAGTGAGTTCCTCTTTGACA ATTTTTGAAAAATAGAAATAAGTCCTAAATGTTCATTCTTTTTTATGCAT GTTTGAATCTCTATTCGACTTTTATTTGTATCTTCCTATGTGTTTTATTA CAACCTTCATGTTTGGCCCTGAAATGCAATACTATATTTTGGTTAAACAT AAAATTCTAGATATAATGTAATTAGAATTCAACTGTATTTAAAAGTAAAA TAAACAGGGATATTTTTTTGTTTGTTACGGTCTAAACTTTTTTATTACCT TATCAATAGTAGATGTATATTGCCTCCTCTAAGGATTCCTAATGTCTGGT TTCTTACTAGTAGTCATGCCTAGAGTGATCATTTCATGATACGGAAACTT CCGATAAATACCGAGCGCTTGCCACTGCCGTACTTACTTATAACAATCCA AAAGTTCCCTTACCAATCAAAAGCGCCAAAATCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059255TCONS_00059255Clytia hemisphaericatranscript
TCONS_00059254TCONS_00059254Clytia hemisphaericatranscript
TCONS_00059253TCONS_00059253Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059253-proteinTCONS_00059253-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_320supercontigscaffold_320:233915..240649 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.6 6.9 3.24 2.08 40.23 30.62 34.97 36.62 21.53 26.25 17.66 15.99 18.11 16.67 13.73 16.85 29.02 36.22 30.05 34.41 36.73 38.96 25.77 27.5 32.9 42.17 37.82 22.67 118.58 104.48