XLOC_037264 (gene) - C. hemisphaerica

Overview
NameXLOC_037264
Unique NameXLOC_037264
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_319:188810..195333+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037264 ID=XLOC_037264|Name=XLOC_037264|organism=Clytia hemisphaerica|type=gene|length=6524bp|location=Sequence derived from alignment at scaffold_319:188810..195333+ (Clytia hemisphaerica)
ttcaagctcaaaaaaattaataaaaggataaaaacttcaaaaaataaaat gaaattggtGGTAAAAGAATGAAATTCATGGATTGATATAAGGAAGATAT AGCAGAACAAGATGGACATTCTGGAGTTTATCAACGCTTTAAAGGTACTG TTCTCACTTTTCCccctattttttataaaatatcaacatgaattttattt gtttcttttacTGCATTCTTTTTGCTTTAGCAATCTGGTTTCTGAAAATA ACATAATATTCCATACCATTTCACTGTCAAGCTCTAATAACAAACTCTTC TTCAAAGTTTTGAACCAACGCatatccattaaattttgttagaGTCCTAA ATACTCATTACACTTGGCGACCTACGAGGAAAAGAAATGTTGAAGTACCA TACTCACATCATAAATATACTATATGAAATCATTGATTCTCTCTTTCATC AAAAGACTGGTGATAGACTCCTCTtggtcaaaatcaaaaacattaaagCT TCAAAACGAAGCCATTGAATTTTGATCGAGTCCTAAATAcaagaaatgtt gaaatatcaCATAAATATAACACAAGGAATTTATTGATTCTCTTTTTTTA GCAAAAGACTGGTGATGATTATTTCATGCATTTGGAGAAGTTGAAATCGT CACCTGAATTGATACAAGAGACCATTGATGTGCTAGAATTAAAAAGTGAC TCTGATGTGAGTTATTCAGAATAATGATGATAAATTCCCAAATTGCTCCT TGTTcaactcaaaaatcaaaactttcaaaaagcaACCCTGATTATACATT TTCTCCATCCCACTTGAAATTGAGCCATAAATTTTCCAAGGAAGACATAT CATTTTGTTCTAACATGTTATTGTGTACTTTGTTGACGTTATTTTtcttt agctctagtttagacggcccacttttcgccctgcctattctaattgtttg aGTAGGTATAAAGTGGGCAcaaagttaaaatctttgcttggaaagggTTG AACGAAGATCAttcattgacgtcaaaagaaggtaatgcattgactttaga cagccaactttatgcccactttaatgaacaattagaataggcagggcgaa aagtttTTCgcctaaactagagcttattgATTTAATTTACTATCCTGTAA AGATAACACTTTCTTTTTCTAACTTTCCATAGTTGGCAAATGCAATATGT GAAGCATTGTTTGTTCTTTACACTGATGTTGGTAACGAATCTCACAAAGT TTGTTTGCAATTTATCCCGGCTGTAATATGGGCGTACTACTGTCAGCTTT CTCAAAAGgtatattgtttttatttaataaaagTATGATTATAATGTTAT AATGCTAGTAATAATGTTAGTTGAACGTTGAAAGAACTTGCTGTGTCAGT TGACACATTACCAAGTTTATGTACAGTATgcgtgtttttctgcgacggag acggtaaggtggttctaatttttttagatcctgactgactgaggacgacg gtaaatcagcacttttaccgtcctcgactTTGCGGggcagaactgcgggt tattccattCGCTTCAGttacaaatacataaactcgctattgcaTTGCTA GACTAAGAAGTGAAACTTCAATAAAATCCAGCGTCAAACATTAATTGTTA TCTTCTATTTCTAGGCAAGAGGAAAGCCTGAAGCTTTGCTATTAGCTTTC TATAATAAGGTAAACCTTTATGATAACCATCATGAAATTGTAACAATTGT CTTGTTCTTAACCCTAGAAAAAgatcattaaattttgatttaacaaatCC AGGTTTGGAAACTCAATCTGTTGAGATATGCAGAGGTATTTCTCCTACTC TCCTCACTCTATTTCTACTGTATCATCGTAGATTTCTCCTTTTACTAAAT CAagtgaatttgaaattaaaaattatttttgtttacttttcagtgTGTAA CAAGGAATGTGGAAACACCCTTCACCAACTCTTTTCGTATTCCGAAACTC AGCAAACCTTCCGTTTTTCACGAGGTATACTtttgattttatgttttttt tcttatggttatttttttgttaaaaccgATGAATcgaatttctttctttt attcaaatacaaaaattgtTCCGTTTCCCTTTAAAgtattaccttattac acaaatatagTTAGGCCAAAATCCAACGGCTTTGGAAATGATACGAAtga cttgttttttttcattttcttttgcttttacCTCGCGGTTCTTTGCagat tttttttgcgtgaacataaacttttgcgaattgccctctcaagaattttc tacatttactttcgcgaaaagatctaaaattcacgaaaatcgcgaaagtt tgccTAAAGTAGTCGAAATTAAGGCGGCTTTTATtaacataaattttttt attcgtGTCTAAAATCACGTTTCGTTATATTTGTAAAATAAGGTATATCc acaaaaattttaagttttcaatacTCTTCTTCGTTTTAGCCCATGCAATT AGCGGCTTCAGCTACGTTAACGGAAAACGCCTTGAATCAACATGACAAAT CCAATAAAACGATCATTTTTAAAGGACCCACAAAACGCTTAGATCATATT CCTTCTGGTATGAGGTAAAGTGTCTTGTACAAGATTCATTTCAACATTAC GATGTTTTATGATATATCTTACCAAAAAAATTCAGGATCAGCCACCTAAA TCAATACAACATTTATCTAGAAACACTGCTGAAATATTCTCTACAAGAAA TATTATTTACATTTCCAAACTTTCCTTAAGAGAATAACTTATGTTAAGTT AATAAATAAATTAAGGTTCTTGTTATTGGAAGAtccaataattttcattt tctattcaagaaaattgttcaatttttttcgacaGAAGAATCATCCACAT ATTACACAATAaactaaaatcattaaaatgatCCTTATTTTTCCAGGAAT ACAGTCATAGCAACAGTATTACaagaattcaatttttcactttcgtcATA CACCAAACCAACTCTACTTTCACTTTGTCATTTGGTGTTCAGGTTTGATC TACAGCTAACTTGCTCGAACTTTAATCTTTCTTTCAATCGAACTCAACtt ccattttaaagaagaacttCTTGTCCTTTCAAGATTGAAGGGGAGAACCT TGACGGTAGTGCTATAGTAATTGTCAAAAACCCTTTTCCAAAGGAAGTAT TCTTTTTTTAGGTGGTATTCTTATTCTATCTTTGCAGGAAGaaagttttg catttttttgaatgTCTTCTAATTAACCAAATACTTGCAAAGCTAATTTA TTCTATCATATGCGGAATTGAATTCCTAAAACTTCATTCCATTCGTTCCT TAACCAAAACTGCGCTTTTTTCGAGCTTTTGGTTAATAGTCTAAacctaa ttttttgagtttctcAAAAATGATTACTTTTAAGTACTTTATGAAATCCG GAATTTTACGATGATGGTCTTTGTTACCTGCAAGTCTTTCATATTGTACC TCGTCTTGTCACTGCTCTAAAAGCTCGGACTATAacattggacctacccc ggtggggtggaggtcctataaattaacttttttccgttcgttcgttatta gctttcctcatgattggctcgttagttttttctgattttttgcacaagat gtataactataaaccctcaaatgtgacggagcccgttTTCGAATAACaaa tattttgggcaaatttgggccaaaaatttcggctaaaaaacgggtctttt ggactttggaaattggatcattaactttttctgatttttgcatgaaagta ggtaaaagatcgCTTAAGTAgattatttcaaaacatttttgttggcttaa aaaatgcatgtttatctataagaatcactaataacaagcatacatcaatg ttcttagttaaattactcaatttttttatgagatagatgttttttttgct cacgaagtcttgaatatggaagaatattttaagagcatgaatgtttttta taagaaacaaacgactaattttaatagatcgtcactatttgtgttctgaa tgattgcttaatggtcacgctcacgtagatatcaattatatatgtgttaa atgcataatcaggtaggtccataaaagtatcactttgTTCTTTATTATAT TGTCAATAATTTACTCTTTTATTAGGTTAAGCATATGCGGTTACAAGCAG CCAGAAGTTTCATGTCCTGGCATAtccaaagaaaatatttcgTCGTTATT CAATAAAACGAAAGTTAGACTGTCGGCAAAATGTGTACAAGAATTAGTGA CGGCTCTCCAATTCACATCGTAAGTCGTAACTAAAATGTGTTTGTTGTAT AACTTATTTGTATAATTAAAATTAATAGCATGAAGCAAATTTTCAACGat aattattatataaaaaaaccaAACATTTGCGTCCAAAGCTACCTATAAGA GGGTTGTATGTGAGGTTGCTGGGGATCGTGGGGTTTATTCTCAGTAATCT GTTCCATGTTCCACGTTCTCATGAAATTACACCGTTTACCACCCCTTGTA AACCAACTCTGGAAGGCTTAGGGGTAATTTATATGTTTATCTACTTTATC TTTTTGCAGTTACAATGGTCTGTATGAGGAGTCGAAGATCGTTCTTGATT GTTTACATCAGCATTCTCATTACTCTTTACTCTATGCTGGTACTCTGGTA AGTGAATCTTATTTTATTCATgtcagtgttaaaagttcttcttTCGCCCC GGACGGGTTTCCTTCTCAGTTAAGTATGAGGCTCATAATTCTATGTAcac aattcaccaaaatttccaaaatatgtGCAGATTCGCTGTGTAAAATCCAC TTTCCAGCTAAGACGATAAATACTTGCCTTGACCACTGAATAATAGTCTG GCGAAGTCCTAGTACAGTCGTAAGGACTGGCGAAAATGATAACCAATATT TATTATTCTATTATCTACTGTGTTTGatagtttgatttttcttgaaaaat agaCTCGTAAAAATGTCGGCTAAAGGTTAACTTTAACTCCTTTAGGAGTT CCTAACGAGATCCAAGCTTTCAATACAGCAGATAATAAAGTGAAAGATAT GGGCTTtcattttttaacgttttttttagAACACGTCGGCTTTAAAGAAC GTTTTGGAATTGTCAACTTCGGACAAGGATTTCGACGTTTGTCCGCCCAT CGATCCGAGGAAATGTGGTTATCGCGTTAAAGGAGGTATCTTTTCAGTTT AATAGCCCTCGTAGAAATTAATGGTCTATGATGGACAGTAGCGTTATTCA TCAGCGACGATGGACGAGGTTCCTGCAGGTTTAATTTGTGCTACGGCATA CAGGCTATTTGAGAATAGACCATTGACTTCGTAGCCCATTGACTTCGTAG CCCCAATCcttcgtcatgattgcggcgcgttctaaACGCGACGCTAAata taagtggcttcactttttcttgcctgcgCAAGGTCAGAGGTtttactcta gcccttcgggcttcaaAATCAATGGAATAGACATTAAATgacttattttt ttgtttttaggaaAAACATCTGTAATGACTCCTCCTCGACCATCCTTCGT CAATTCCTTATCCATCGATCGAACAATGGAAGACTCAAATGCCTCGATCA CTCAATCCAAATCTATAGCATCCCCATCAAACGTTACAATACATATAAAG ACAAGTAGTAATAATAAAACCACCGTTACGGCTATTCCATCAATAGAGAT AGTAAGTGAGGGCACGGATAAAACAGACGGTGAAAATGATATGGAGAATG GTCACACGCCTAATAAAAGAAGTAGTACGTATACTGATGAAGACTCTGAA TTTGAGAATGATAAAACACCTTTAATATATTGTAATAGTTTGAGTAGTGA TGGATCGACAACGATTGTGGTACTTAAATCAAACCCTTCTTCATCATCGA CCAGTGAAAAAAGTCAACAAGAAACACCCATGTGAATGAAATTTCTTggc ttgttgttttttttatgttgGAGTAACCAAAAAAGTCCATTTCTTAGTAA CGTATCTTATGTGTTGGGTATGGAGAGAATTGGAAGAATTCTctggtatt tttttaaatgatgaaTTTTGACATGTAGATGCAGGTACATTAATTGTTTG TACGCTAGTCTGCCCATACGTCCCTGTAGGTTTAATTACAGttgtcaaat cctcataaataAAGGTTCTACCATCGTCAATCatacaaaaaagatttttc cgatTTTATGGTTTTGTTATTAATGATTATCGCGCTCGTACACTTTTTAG TTTCccgaactttttatttttcctcttttagtacctttttggtttcaatt tttataattaaagaaattttactaaattatttgttaaatttttgttaatt tttgggcattttttttgatttattactttgattgggctgttccaaaaatt tccatacatttgggggtggacgaaccttttcaagtgaaaacaaatttctt ggaaatgtgtaaataccccctgga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059167TCONS_00059167Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059167-proteinTCONS_00059167-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_319supercontigscaffold_319:188810..195333 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.95 19.54 14.14 12.99 31.79 25.73 33.1 34.28 24.46 25.81 19.86 15.48 13.03 12.31 17.16 17.72 16.38 15.61 11.24 13.94 9.96 10.43 30.05 28.77 11.14 15.19 13.46 11.04 24.84 24.01