XLOC_037202 (gene) - C. hemisphaerica

Overview
NameXLOC_037202
Unique NameXLOC_037202
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_316:172840..179359-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037202 ID=XLOC_037202|Name=XLOC_037202|organism=Clytia hemisphaerica|type=gene|length=6520bp|location=Sequence derived from alignment at scaffold_316:172840..179359- (Clytia hemisphaerica)
GGAAATACTGGCGGGAAGGTATCTTTATTATTCAAGACATAAACACTAAA GAATATGTAGGCTATGTCATGTCTTGGTTGCCCAAACTAGATGTAAAGGT AGGGCAACTGCACTGGCTGTGTGTCAAGCCGGGTCATCGAGACAAAGGTA TTGCAACTTGTCTTATTGACCAAGTTTTGTGCTTTTTCAAGGAGAATAAT TTCGAATCAGTTTATTTAAAAACTGAAACGTTTAGGGATAAAGCTATTTC TTTGTACAAGACATTTGGGTTTAAGGAGTATAATATAATGTTATGAAGTT GCACAGTAAATACTTTAGGACATAGGCCATTTCACAGTCGAAATGGATCA TGGGTAATCAGGTCAATGGGAGTAGCTTAGAAAAGTTGACCAAGTGGTCT AACGGGTCAGCGTCTTATACTACGAGTTCCTGGTTTGAGTCAACGATCTT TCCATGTTCCATTCTGATCATAGATAGCCGAGCTGGTTAACCATAGACTC CGGCAAAACAATCGGGAAACTTAACTATCTAAAAGCTCTACTCCAAGGTC CCGATTAAACGTCTCCTCCGCTTTCCCTAAAATTTTGCTTAGGATATAAG CATCCTACAAAGCATTTTTCAACCTAAACATCTCCGAGCTGGAGCGGAAG CACCCTGCATTGGAAAGCTTTCCATTGTTATAGAGGACCTGTAATTAACA GATTCTATTGATAGCTACTAATACATGTATTATTATACAAAATTTGGGAA ATTTCTTTCAATATTGAATTTGATTTAGAGATTTTATGCCTTTATTGAAG AAGGACCTACCTTGTACCTATAGATCTAAAGTCTGAGACGCTATATTTCC TAGGAATAAAGATTTCGAGACGAACCTCGGATGATCTCGGAAGATCTGAG ACGTATTCTGCTGAATTCGTGCCTAAATGAAATTTTACTTACGACCTTTA GGATTGAGAAATTTCCCTTAGCTTAGTTATTGTTTTGAGGCCTTAAGTTT TCTTACGTTCAAAATGTTTTAACGATGTTGGATACATTTCGTTATGTAAG TAACGAGACTAAGTGGTTTTATAGAACTTTTTAAGGAGCGATGGCCAAGT GGTCAAAGGCGTCAGCGTCTCAAACCAGGGATTCGTGGTTCGAATCCCCG CTCCTTCCAATGTTCCGTTCAGTTCATAGATAGCCGAGCCGGCTGGCCGT GGACCCCGTGAAAACAATCGAAAGACTGTCTAAAAAGTCCTAGATTACTG GGCTATCCACGTAAAATATCGACTCTATCTATCTATCTATCTATCTATTT GACTCAATGAGCTTTTCCAGAAAAAAAACCATATCCCCCTGTTAGGGATG CCCAACACTTTGTGGCTAGAAATTCTGGAACCCTCTGGGTCTATTTCTAT TGAGATATACGTTATACGTTTTTTTTTCTCGGGAAAAGTCCAATGCTTTT TTTTTCTTTTTAGGATAAATATAAGTCAAAAATAAAAACTAAAGTAGTAC ATTAAAAATGGTGCAAATTACTGAAGATCTGATTCGAAAACGATCTGAGC ATAACGATTGTGAAATCACAACACTCGAAGAAATTTCACTTCATCAATGT GACATTGAACGTTTGGAATACATTGGGAAGTGGTGTCGAGACTTGAAAAT CTTATACCTACAATCTAACTTGATTCCCAAAATTGAGAACATTCACCAAC TAAAGAAATTAGAGTATTTGAATTTGGCTTTGAATAATATCTTGGTTATT GAGAATCTGAAAGGGTGCGAGTCGCTGAAGAAACTTGATCTAACTGTTAA CTTCGTTGGTAAAATCACCTCTATCGAGTCACTCAAAGGAAATGAATTTT TACGGGACATGTATTTAACGGGTAACCCTTGTACGGAATATGTGGGTTAT CGAGACTATGTAATTGCGACATTGCCTCAGTTAACCAGTTTAGATGGTAC ACCGGTATCCAAGTCTGAACGCATAAAGGCGAACCAGAAATTGACCGAAC TGAGGTGCGATATGTTGAGACAAGAGAAAATATATATGGCTAAACAAGAC AAAGAGCAAGAAATTGAGGAAATCGAGACAAACGGCGTCAAAAAAGAGGT TTGTAGTTTTACGGATTATACTATACGCGCGTTCTGTGTAAAGTGTAAAG ATGTCATGGGAGAATTGAAGACAGTCATACGATGGTCGAATCGTGAGGTG TGGAGAGAGGCCATTGTATTTTTCGATCTTGGTCGATCTTAGATTTTCTT GATGTCAGATATGGGGGAGGCATTATATTCCTTAAGAGATATGAACTCTA TTTGTTGGCTGGTGGTAGCGCTTTTGCTCAGTCTCACCGGGAAGAGGCCC CCCTGTAGTTTTCGTGATGGCATGATTGGCGTTTTTTCAAGTTCGTTATT TTGTGATTCAAGATTTTAAAGTGTGTGAATGCCTGATCGGAGGAACCAAC GTGATCAACGTGATCGTGATAGAAAGGAAATTTAACTCGTGATAATATGA TTTGGAAATTTTTTTTTTGCGTGATGGCGTGATTTGAAAGATGACTGGTG GGGGCCTCCGGACGGGTGTGGTTTTGGTGTCCACGTCGCTAATCGTCCCA TCGAATGGCAGTCCGAGTAGGTCTGTAGGATGGATGGGATTTCCTTAACA TAATCGTCANTATTTATAAAATTAATATTTATAAAATTAATATGTATACT AGTGAGATGCTCTGACCGGCTACGCTAGCAAAGTAGAGTGTTAGTAATTG TAATTGTAAATTTAACTCGTGATAATGTGATTTGGAAATTTTTTTCTTGA TCGATCTTAGAAAATGACTGAAGAGGAATTCTGGTCAAAACCTTCGAAAT TTACTCCTCAAAGTCGCGTTGAAGCTCACCATTTCATGGAAGAAAAACGG AAAGAAAAAGAGGAAACTAAGAAAACCGATTTTCCCGATTTAAGAAATTC GTTACAAAGAACAATCCGATTTTTCACTGATGATGGAAGACCGTTGAATA TTAACCAGGATAAAATCGATTTTGAATTTCAAGAGAATGATGACTTCACG GGCTACGTTTTGGATGTGGCGTGTTACAAACATTTAGGTGAGAAAAACCA TTTCTAACTTCTAACTGCTGACTTTAATCGGATTAATTTTCGCGAAATTT AATCTTGCGTTTTTTTTACGAATGCATTTCATTTTCGCGAAAATAAACTT TCGAAATCGATTGAGACTCGATGAATCGCGAAATTAATAGCATGCAAAAT TTTTGAGATCAGATCTTCAGCGTAAGATAAACTGTAAATAAGCTATTTTT TGGTGTTTAAAGGGCGGTCATTTTCAGCAAATTGTTGGCTGGTTTGCGAA GTTTAATTAATTTTTTTTGAAATTTTGTGGCAGTGAATATACCTTCCCCA ACTCATGTCATGCGAGGGGAATTGGATAGACAGAAAAAGTATGTGTGGAC GATAAGGGTCGGTTTTTTCACCTTTCACTTTTCCAAAGTCTCTCTAAGGG TTACGAAAATCAGAAAATTAAAAGTTGCCCCTGTAAGGGTCAAAAAAGTC TCGCAAGCTACAATCATGGACAAAGTATTTGAANGGATAAAATCGATTTT GAATTTCAAGAGAATGATGACTTCACGGGCTACGTTTTGGATGTGGCGTG TTACAAACATTTAGGTGAGAAAAACCCTTCTAACTTTTTTATTAATTTTC GCGAAATTTAATCTTGCGTTTTTTTTACGAATGCATGTCATTTTCGCCAA AATAAACTTTCGAAATCGATTGAGACTCGATGACTCGCAAAATTAAAAGC ACGTAAAATTTTCGAGATCAAATCTTCAGCGTAAGATAAACACTGTAAAT TAGCTTTTTTTAGCGTTTAAAAGGTCATTTTCAACAAATTATTGGCTGGT TTGCGAAGTTTAATTAATTTTTTTGAAATTTTGAGGCTCCCGAAATTGAA TCTTGTAAAAATTAATCCAATTAAAGTAATTTTTTTTGTTTGTCAGTAAC ATAATAAAAACGTTAAAGTAATTTTTTTTTTGTCAGTAACATAATAAAAA CGTTCGTTACAACTCGAGAAAGTTTTTACGTTTTTTTTTTTCACTTGGCA AGTGAATATACCTTCCCCGGGTCAACTCATGTCATGTGAGGGGAATTGGA TAGACAGAAAAAGTATGTGCGGACGATAAGGGTCGGTTTTTTCACCTTTC ACTTTTCCAAAGTCTCTCTAAGAGTTACGAAAATCAGAAAAAAGACGATA TCGGCTTTCCGAATTCTCCCCGAATGATTACCCATGATGCATTGCGCAAA AAAATTCACGGGCGATATTGACATTCCGTGAATTTTTTGCGCAATGCATC ATGGGTAATCATTCGGGGAGAATTCGGAAAGCCGATATCGTCTATTCAAA GTTGTCTCTGTAAGGGTCAAAAAAGTCTTGCAAGCTACAATCATAGACAA AGTATTCAAGTTAAAGGGGATTTCCCTGCGAAATTTTTAACATCACAAAT GATTTTTAAGTGCGTTAAAGTACGGTTGGAAAGTAGAGTTTTAACTCTGA GTTTTAACATGAGACTTAAGCCTTAGGACATTAGGATCTCAGGATTTAAA AGCTCAAATTTGCTCCAATAAGGCGTGGAGTATAGCCCAGAAGCCAACGA ACCCCTCCAAAAACGAATTATTCAATGAAAGAAAGTGAAAGTGCTAAAAT AGCAATTCTCGCCCGAACTTTAAATTCTGAAAAACATGAAAATATAAATA TCTCAATATATTTTCATGATTGTAGTATGTAGTTCAAATGATCGTTTAGG TTTGTTATATTTTTTATATCTTTGCAGATACCTCACTGATCGATGTTGAT TTGCAACCACACTACGTTCGTGTTACAATGAAAGGGAAAATACTTCAACT CTCTCTCAACGAGGAAATCAGTCCAGATAAAAGTACAGCACAGCGATCGC AAACCAGCGGACACTTACTTATCAACATGCCTAAGCTAAAATATATACTT GAAGGTCGTTGCTCTGGTTCTAGACGGCCGAAAACCGATTCTAAAGGCGC GAAAATGGGCAGTAACGAGTTTCCGGATGCAACTAAAACTCGGGAAACGA AAACTATCGGTTGTGAATCTGGTAAAACGAATACCGACGACTTGCAAAAG TCGGTTGAACGACTTGAAGTGACAGAGAACGAGAATAAAATTGATTATAC AAACATTGTAAAAGAGGAAAACGAAAAATCTAAAGATTTGAATTCGTTTA TTTTCAATGGAAAGAAGAGGAAAGGGGGATCACCAATGAAAAATAATAAA AATGCAATTAGCGAAAATCAGTATGACGAACATTTCGTTGACGATTTAGA TGTACCACCTTTGGAGTGAGTTTTGTATGCAGATGGTTTATTGGCCATTT CGCAGTCGCAAAGCGTAATGGGTAATCAGGACCACTGCGCGCTAATGACG ACTTACTATTGGTCCAAAGTTTTGAACATTTTTGAACATTTTTGCGTCTA ACCAACGGGAGAACTGTTATCGAGGCGCAATCATTCCTGATTACCCATAA TCCATTTAGACTATGAAATGACCTATGGCTGCATAGATCATTTCACAGTC GAAATGAATCATGGGTAATTAAGATTGATTGTGCCTCTATGACGGCTTCC CGTTGGTGAGACGCAGAAACAGCCAAAAATTTAGGCCAACAGAAAGTCGT TATCACAGCGTGATGGTCCTGATTACCCATGATTCATTTCGACTGTGAAA TGGTCTATTCCACATTCTTTTCTTCAAAAAGTTTCGATGGAAATATATAA AACTTATAAAACTTCATATAAAAATATTTTTTAAGCATGTTTGATTTTAA ATATTTTATTTATTTTTCAGAAAAATATTATTTGGGTGTATGTATTGTAA ATACTAAAAAGAATACAAAGTTTTTGAGACAAGTTCTATTATTTTTTAAG TAGGATACAGATAACATGATAATAATATATGACATGTAAGCATGGAAAAA TTAGTCTTTGAGTGATATAAATTATACATTGTTATAAAAATTTACGTATT ATAAAGTATTTTATGGAATCAGCAGTTTTCCCCAAACATAGATTAATTAG ATACCCATTTTTTTATAAGAACAAACTATATAAGAAAACAAGGCTTCAAT GGCCAAAAAGTTCAGCACAACTTAAGAAAAATTTAAGGCTTTGCGGACTA AAAAACACACAATTTGAGTGATAGACAAAAATAGTCGAAAAAAAAAGTGA AAATAAGTACATTCTAAGGCCTGAAACTTAAAAAGTTAAGAATGTCCTAA GGCTTCAAAATTTTAAATGCTCATATAAAAAAACGTGTTCACTTAAAATT TAAAATTTATGGTAGACAAAGATTTTAATATTAACACAGTAGAGATAAAA TTAAATATTTGTTTCACTGAGCCCTTTTCATGCTGGGTTAGCGCGACACA GCGTAAATATTTTTGTGATCATCTGAGTGATAATAACCAGGGGGTGGGTT CTTCTGATATGGTGGTAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059073TCONS_00059073Clytia hemisphaericatranscript
TCONS_00059072TCONS_00059072Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059073-proteinTCONS_00059073-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_316supercontigscaffold_316:172840..179359 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LRRC6PREDICTED: protein tilB homolog isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.18 6.04 7.18 8.99 6.93 4.63 5.09 5.31 2.68 3.62 2.63 2.3 2.35 1.9 3.36 3.51 3.92 4.67 1.29 1.53 2.7 2.51 10.09 9.35 6.54 7.06 4 3.08 7.58 7.88