XLOC_037070 (gene) - C. hemisphaerica

Overview
NameXLOC_037070
Unique NameXLOC_037070
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:480474..485020+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037070 ID=XLOC_037070|Name=XLOC_037070|organism=Clytia hemisphaerica|type=gene|length=4547bp|location=Sequence derived from alignment at scaffold_314:480474..485020+ (Clytia hemisphaerica)
gggaatatgggaatatggggagacagggaatatggggagagagggaatat
gggcaataagaaaaatacataaaaagcATTATCTCCTTAATCTAATAGGC
AAGATACATGGAGAACTAGCCCATAATTTGCAATCAAGACATATGGACAG
ACAGAACACAACACTCGCCAGTACGAGCCTTCCTTCAACAATTACAAAGA
GCTCAAGGAAGGCAATTAAAAGGGTACAAGATGATCAAGTATCTTGTTCT
ATTAGtcattattttctttcttcattaTGGCACTTCAAGCATACATAATA
TCACAATTAtggtaagatttttttctaGTGTTTTCTGTGTCCTCCacacc
agacgtccgcgctcgataggatcgatcatcgggacggctcgatgacgaat
cgatatatgatcgatggattacttaacgatccagATGGGAGATCTAAAAC
CACTATCTGAGAGAGAACAATAGAACAAATCACCCTGAACGAACTGAATT
TACGTCCGGGgtggtgtagcgaaaggatactttttgccaccggacaaata
NTCGGCAGGGTCctgacaaatacaccggacagtccggtgcgtcggcaggg
tcctaaaaaatgtgagtccaatattggactcacagctcgaacccgtcatc
aaattataaaaaaacacacgacggatCTCCTGTctaggtcgtcagtagtc
cgacagtaaaattgactttcagcaagttttattgactgtcaagagcaaat
tctataaaaaatctttctataaaaaaaatatattttacatcgactgtcaa
tatttcccttttttaaagtcaatgtTTTGTATTGACTGTCAATATAAGTA
ATGAACAGTCAATGCAAAAAATTCACTGTTAATATTGACCATCAATATAT
ATTCTattagttttcaagaaaattgattgacagtcaatgtaagatatttt
ttgtcaataatttgcaTTCAACAGTCAATTGCTAACCTGTAACCAgtcaa
tgaaaaacattgaacatgggcctaatcaatgttttttgacctatgattga
ttctcaacaacaaaatacatcttttgcagtgtagctctaaagctttaaaa
cagcatctaataacatgaaaaccagaatatgattcttcaatgggaatcaa
aactataaagtgcacttacaaacatcaatttgtcagatctaacaaaattt
atcacggcactgtcatcattgacaataaaacaaacaatattctgtcagga
gccttgtaaacattccaacaacttccatcgaaatgatctatcacagctca
gtctaccattttagcgtggtccgaggattgagccgagaactctcgcagag
cgcctgagctcccgcgcggcacgcaccgcggggatgaaaaacttcaatct
gtcaatcattttctcaagcgaaaagtacgcgaagcgattctagctttacg
atagtgccgcggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTACATCAATATGctttcttacctg
tctttaaaaatataaataaaagtaatcacggaaaaggacgcaaaaaaaaa
agacataagtgtgagaacagagtaatcaaacNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNagcacttacaaatcgattatggtttca
aaactttccggtgaatttccctttttctcaaatattaggACCATGATTGT
AATGATAAGAATGTAGCGTTGCAAGATTTGACCTATTGAACTACTGCCTA
TATGGATTCTATCAAATGATGCACAGTATCTAGTCAAGAATCCAGATCCA
GCTGACAATTTCAAATAATACAATATAAAAGAAAGTCCTAAAATGTTAAC
TTTTACCTGAATGATGTACTAGTTTTGAGtatgaaatatatttaaaaaaa
actcactttgttgtttttcatgtattgaaaagtcaaaatgaacatTTTAG
GACTTTCTTTTATATTGTATCTAGTCAAGAAGTTAGTAATTTACCCTTTC
CTCTGGAATGGTTgtttagagaaaaagaaaataaattcaaggaaaattaa
aataaattgcATCATTTTTTCTTCAGCCAAATATCTTTGGTGTTGCTTAC
AGTAAACAAATTCCATACTTGAAAACAGGGGTCATAGAAAAAATTTAGAA
TGTTTTTATTGGCTCTGGACTCTGCCTTTATACATAATacaatattcaca
aaattgaaCCTCTGCAATCATCATCATGTCATGTAAAATGATTAATTTTT
GGCTTTTCCTTCTTAATTCCTTTACCAATATCTGTTTAAAGAAAGGAGCT
AAATCTCAGAGAGCTGGAATCTTAAAATTCAGGGAATCCTCAAGTCTCTG
GGGCAATAATGTAAAGATCTGAACGAATTTGTAAAACATTGAAAGTCCTT
TATCAAAGTTTATTACATTTGCATAACACTAGTCTTTCATTACTCTGTAT
CAATTTATGATCTTTAAGAGTTGATCGTAAAGTGTCTTGAGTTAATAAAC
TTGCAGAAgagaataaaaattcatttcttccTAATAGTATAAGTGGAATA
CTTTGGAGAAGGAAAAACTTCATGAAATCATATCCAGTAGAATGAATCAT
ATGTGGTCGAAAAGGCAGTTAAAAGGACctaattctttttaaattgcCAA
AAATATATACTGTAGCTGGttggttaaaaaaattgaaagattgaTAATCT
CACTCAACAAAGTAATTTGGGTAAGATAAGATAATAAGACTTTTCATAGT
AAAACAGTACAGGTAATAGTCAAAACCAATTTCTATTTATTAGCACACAC
TCTTagatgtttgaaatattttgaagtaatttttgttacaTACGTCATTT
gtcattttcttaaaatttgcaCCGTATTTGCACTGGTATTGAATTGTCAT
ATTTCCTTAcaaaaactaaaattaaaaacattggaTTCTGACGAGTTTTC
CGATTaccttcttataaaaatgttcttctCATTTTTGAAGGATGATGGAC
GGAAGAATATTCCATTATCAACATTTGGATTTTTTGAGAATGGCAGGCTC
TTGGTTGATCTGGTCAGCTTTAAGTTTAAAGTTCCAAAGCAGGTCAAGTT
TGATGACAATGCCTGGGCTTCCAATGTAAgtaattttttataatcttatc
attttcttgtgtttttttatCATAAACATTACATGGAACCAAGTTCATGC
TTCTAGGCCAAAAAAAAgtagtcttgtttccggaaatcggccgggtgaac
ttttttttggaaaaaatatatctcacccggccgcaaatagaaaaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058843TCONS_00058843Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:480474..485020 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.44	29.76	33.08	26.75	10.4	8.96	10.15	10	16.58	14.48	18.72	15.37	13.44	12.68	10.24	11.36	17.19	18.49	9.22	13.5	20.54	24.91	31.83	36.08	10.98	11.8	18.43	13.2	25.51	25.79