XLOC_036850 (gene) - C. hemisphaerica

Overview
NameXLOC_036850
Unique NameXLOC_036850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:1197463..1206780+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036850 ID=XLOC_036850|Name=XLOC_036850|organism=Clytia hemisphaerica|type=gene|length=9318bp|location=Sequence derived from alignment at scaffold_311:1197463..1206780+ (Clytia hemisphaerica)
TACAGagaacaaaaataataatacaaatcatataaaaattataacaacac
acaaaacacaaaaatctGATTGTAAATCGATAAGatctttgaactttttt
tttctgagTGAGAGAGAAAACaagaaaatccataatggcagatagtTGTA
GTAATTCGTCTGTTGGCTCACCGTACGCAAGCAGTACTGACCTTCGTGGT
GAGGATAGTGAAGAAATTATGGAGCGTGGACGACGCCGATCACGCAATCT
TGGCTCCACAAGCAGCCGCAGAGCAGTCGGTGGACTGGACCTAGAGGACG
TCGAAAATACAGTTCGTGGAATGCAACAAGATTATAATGACATGAAAACA
GAATTTGTAAGTCATaccaattattttattttcaaatgtcATTTCCGGAT
TGAGATTTTCGGTCTTAcaacagtcaactctctctaattcgaatctctat
tattcgaatcatTCTGtgattcgaactaaaatattggtcctctcACCTGA
AAggtggtttaaattactctctgtaattcgaacatttCTCTAAGTCGAAT
AAAAtatttggtcccttgaagatcgaattagagagagtcaactgtaggtT
TGTTTTTTGTAAGTCATCCATTTTGCCTCGCTGGGCTGGTAAGAAGATAT
TGGATCTTTAACCATTTCGAATGAAGTTTTAAGGAGACAAATACCAATGT
GGATAGAGAATGCTTTGAATAGCTTTAAATCAACACACCTAGAAAATAAT
AATAGTACAAATGGCAAATTTTCCTCAACAGAAACTTGAAAATTAGATTG
AATCGTGAATtatatttcaaagttttctcctaatgtaaaagattttattt
tgtgattttttctaATGAGCAGAGGATTGCTAATGATTTTAAACTTCACT
GTCTTCTAGGGCTTTTTATGCATAGGTCGAAGAAACGATCTCTTATCAAA
CTTTTAATCTCGTTCTATAACcttgattatttttttaccgAGAATTTCCG
AATCTTGGAACTTTCAAACGTGTTATAGGCTTCGTTTCTTCTTTCTGCAC
ACTAAAACACAACATCCAATGTCAAATTCAAATTAGCAGTCTCAAACTCA
AGTTGAGACTTTCGAAagcgaaattttttgtcaataataaATTTAAACCA
ACCACGGTGCTTTCTTTCGCTGCTGTAAATTAGACTGAACTCTTCAGGAC
CAAAAGAAAAAACGCTGGGTTTTTTTTACAACTCGATATCTAATTCTTTG
TGGAAGTATcgtatggcgcgccaaaaggctttttaataccaacttttttt
tataataccaacttttttttataataccaacttttttttataataccaat
ttttcttataatatcaacttttttttataataccaactttttttattata
ataccaactttttttattataataccaactttttttttatagtaccaact
ttttttttagttcgaagttttttcaataaCACCAATTTTTGTCTCGCTTA
CTATGCATGTATAATCGATCAAATGTAGAAGGAGTCTTAGCGCGATTACA
CCTAGCCTGGAGGCCACTTAAggttttttgatagactggatgacaCGATT
ctctaattcatgatatgcaccactcaAACCACTGGAGTCTTccgagaatt
ttcaaaatattcaacccaatacgtcacttaaacaatagaaaaagtgacgt
attgggttgaaTATTTCTGAAAATGTAGGAAGACTCGCCAGTGGTCGGCC
AGTGGTGcacacagatctgtaaagcccgaagggctagatttgcggctttt
atcaaaaagtgaagcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNagtgaaagttggtattataaaaaaatgttagtatta
taaaaaaaagttgatattataaaaaaaagttagtattaaaaagccttttg
gcgcgccatagtaTCGTTCGTGATTCTTCTTTGAGAAACCCTGTCTCAGT
CATCATTACGTTTGTCAGCAAATGGGTTTCACATTAAGACTTTTTATCGT
TCTTTCCCATTGCAACTTCTTATTAAGATTAATATTCAATTATAGTCAAT
CATTCTAGTTTTGATGGCTAAAGCCGATACAACCGCTCATATTTCATCAA
TCTGCAAATTGATTAGTCTAATTTGCAAGTGCTTATCTATAGAGAAATAA
CTTAGTCTAATTATCACTTGCGATTAGCATACATTAAATAACCTTTTCTT
CACTAACTTGCGACATTGCAAGCTAAATAAAACCCTCGTCTTTTATCATT
CATGACTTTAATGCCAATTTTGAAGTCACTTAATAAAGCAGTATTTTGTT
GTGGATTCTGCTTCTTGGCTCTTCATCTTTCTTCAGTACGGTAAATTTCG
AGGCTAGCTTATTATTTTTTACCCTTATTACTACCGCCGTTTTTGGTTAA
AATTCCATTTCCCGCACTAATATTCCACTTGCCACTCCCTagcttaaaaa
taatttatgggcagttattgaaaaacggatgaacatggtcttagtgaAAT
CCTAATCCGGGAAGTGGAATCTTGTGTTCTAAGCGAAAAGTCTTTCATTG
TATATAAAAATGTTGATCCAAagaatggtaaaaaaaaattatactttgAT
ATTGTACCAAAAACAGAAATTATTGTCTGTCTGAGAAAATACTATCTTAT
CATGATCAAAAGTGGTTGCActtaagaaatgaaaaaattatatcaaaatt
cCATACATTCTTTTCTCCTCCTTCATAATAATAATGCATCACCTCATAAC
ACTCACCCTATAATTTCTGTTGGTTTCACTCTATCACCAACCCAACATAT
TTCATTGCGGCTAATATAGAAAACTATTTTCTGATCAAATTACGCCTATT
TTCTCTACTGTCTACCTATTCTTTTTTATCATCTCCTAGTTCTAGGCCAT
ATTGTCCTCTACAAGGAGGGATCACTAATAATGTGCTCATTCTGACCAAA
AATGAATTTTCCATTCTTCCTTGAAATTTATTTCAGCCCTATTTAGTTAA
ATGCCTGCCTTAACCTCCACTCTATTTGTGTTACCTCCCAAATCAGCCTA
GATAGATGACTAATGATGCTTTTGTCCTAGCATTTTTGTGATTACTTCAT
TAACAGTATATCGGGTGTTTCAAAAATGCCCCTTTCACCGGTATATTTTG
cgtaatataatatatattctaagtaatttttttttactttaaaaatctta
tatataccgtttagaggggtgaaataagggtaaAAAGTCGAAAGTTtcct
tcgtcgcccaaccatggtaggcgacatatttttttggcccccttAATTCA
ATTCGCACGCCGGGGCCATGTTTCGGTTTTGCAGTTAACTTTAACTTCAT
AAGTATAACTTGACTTTATAGAAGCATTAGAATTTCAAAGGTTATTTCCT
AAAATTTCAGAGATAACTTTCCCATTAAGAGTAATTCTGAGTTGAAGAAA
GATTTAGATTGCAATGTCTTTTCTTCCTTTCCTGTTCGACTCTTCCCCAT
GCGATTTAAATAACAGTACTCTTCCCAGATTTTTTGGGATATTTAGGGTT
GGCGTTAAGTGCATACTGAAGGCTCTATGTAATCGGGAAAAAAACAAAGC
TTCGTTTTTTCGATTACTCCATTGGCTGGTGTTGTAATACACTATGAGCT
CAAATCTTCTTTACTTTAGTGTGTCTCAGGTACCGTAGTATTGTGAAAGG
AGAGACTAGACTAAGTTGTTAATAATTTCTTTTATGAAAACAAGGCTTCG
TTTTTTCGATTACTCCATTGGCTGGTGTCATAGCTGGTCATAGCTTTACT
GTGTCATCAGGTTCATATTCTCGATGAAAGAGAGACTAGACTATAAGATG
TTACTACTTTCTTTTGTGGgcaatttttctctatttctctTAGGCCTGCT
AATACAATTAACCAATACAGTCAGTAAACATATCAAATGCTTCAGCAAAT
AGAAGGATACTACTGAATCAACATTTGAGCAAGAAAGATCGCTCTCCTAA
TAAAGATCCGAGTCATTGTTTTGTGTCGAAGTACCTTATTTGTACTTGTT
ACCAAACATTTTGCAATGATTGACCAATGATTTTGGTCATCtaacataaa
tttgtttgaattttgggttcaatttcaatcaatccaTAGATTTTTACGGA
TTTACACTTTGAGACGATAGTCAGTGTCACGAAGTCAATTGATGACCAAA
GactaaatttataagaacatcaaggaTAGAAGCTCGGGACAAGAAAAAGA
CTTGTTTTTTTCTTAGTAGAGAAACTGTCTAATAATTTACATCTGGAGGC
AAAGTGAAATCGTTTTTCCctactttattttgatttatatGAAAGAAATT
TGGAAACCAGGGGCTAATTCAAGTGCCTACAAAAAGAGCTGTAATATTCA
TGTTGTCCATACAGACACTAATGTTTTAAGTGACGAAAGACTCGTCGTAA
AGACGAAAATGATTTATCATATGTGACTAGAGACACCACcttatatggtc
aaaattttcaaatctctTAATGATAGAAACCAGTCCATTTACCATAATGT
AATATGCATTCTTTATCATAAGAGCTAATTATACGTCAAGAAAAATAGTT
CTTTACCACACGTAACACCAACaaacagaatttaaaaaaatacaaaagac
aTTTATATAATCTACGTATAAACAATCTATTCATTGGTTCGTATAGTAAG
TCGAGGAGGAGGTATTTCAATCGATCGTTTTACAGTAATAGTACTAAACC
CTTTTTGAAACCACTTGTGGTGGAGTGAGAGAGATTCATCTTatcttttt
gttgattttctgagTTGAtttattttgtgactttttaccagaaaaaaagt
ttttattttattttggaaagaGGAATTCATAATGGCAGTTGTTCAAGCAC
CGCTCGCTTTGCTGCAATACAATCGAGATGATGAGCAATCAATACTGGTA
AATAATCGAGTTTTGTTTTTTGGATCCTTTTCTTTAGTTTCAGTTTATGT
ATCGTCTTGGTCATTCGATAATGTACCAGCTTTGAAAGAAGAGGGTCTAT
AATATTAAGAATATATCCGAAAATAGTATAGCATGCAAAGCTctcctttt
gtattttctttccCAAGCATCCTCCTTACTGGCGTTGGGGatattatttt
aatgaatttttctaTTATGCAAAGTTTTTGGTTCAGCCATTGAATATGCA
TTTAGTGGTTTAGTGCAATTTGtatgaaatttttcttaataAAAGTCAAA
TCCAGTTATgttcgttttcattttttattgaacaaaacttttaaagaatt
CTTTTAGCACACTGACGATTTCATTCATCAGTTCTATCACCATCTAATGT
GAACCCAGAATGTTTTCAAGTTGGGAGGAGGGAAGGGAAATAGAATAAAT
GTAGCCTATAATCAAAATAATTGTCATATATCCCTCATTCGTTTTAATTG
AACTCAATATCTGATCGTCCAAAATGGTACCTTTGAAACGCGGCAGCACT
TATTACCAAAACCCTTTTATTAACCTATGATTGGTCCAAGTTTACTTTTG
ATGCTTCACTTGTAGTCTTGTTATATCCAAGCAAGGTCTTCATTTATGAT
ATTCATTCATTCCGATTTCTGAAGTATTTGCAAATTTAAGCTAGAAATAA
GCTGTCTAAAGTTTATCATTTCTGGCAAAAACCGGAGTCTTTCCATAGAA
AACTTTTcgtaatgaatatcatgaattcaatCCGTGTTCAAGTAGTTCAA
GTACCTCATTTTTAAGGACTGACACACCTGAGCACAGGTCGGAGGAGTGA
TTCTGATACTAATAATTCGGGGAATCGAAAATGccttaaaaattaacatt
tctCCATAGAAGGTTAAggttacttttttcttttcgcGTGATTCTGCAAT
ACCACTATCATTGCATCgaacaaaaatgacaaaaaaatgttttccttgGC
TGACATGAACTGTGTATATAACAGAGTTATGTAATGGGCGAAAACGAAAa
tacgaaaattttgaaagtataCTAACTAATGGTTgtatttgaataatttt
tttttctgccgACTTCCTTTTTAACGGCGCCAAGTCTGTTGTATCAGTAG
AATGAAACCATGCAAATTCCTACATACTCTCTTTTTTATATACAAGCATA
CCTTTAGCTCATACTTTGGCTCAAATtcggtaaaaaataagcataaatgc
taagcataccttttctaaaacgctgacctttttagggttacttttaaagc
tatttgagctttcttAGACCAAGTCTACgcatataaataagcataaattt
aggctgaaaatgaaattttgctaagcatattgagcctcgacccgattttt
ccgtatgcttataaataaaaaagagtgtattttaTTGCCTTCAATAGAGA
GTTAGATAAAAAGAGATTTCCTTCTCAACACAAATTTGTTGTGTTTTATG
GTTCCttcttaagattttatttccatCTACCTGATTATCCAGTTATCATC
CGTGTGGATTAAATTATCATAACcgaatttatttttgctttctttgtttA
TCTATAACCGATCTACTACATTCCTTCTCCTTAatccttttaatgatttt
tgaggatttttgaaagaatttctgtgcaagtttaaaagattttgttacAA
AATATATTAAAAGAACGCTGTCCTCAATACTACGTATTTGGGGGCGAGGT
TGAGAGGAtaccttttattttgaaagtttgtttATCTGTGAGCCCGATGG
AACAcctatattttcaattaaaaattacTCTTGGTTTCTACAGccttatt
ttaatattttattaagAAAAGAGGGTGCAGCATATTGTCTCAAAAACAGA
GTGATTTAGCCTAAAAATTGTCTCGTTGACACATCAACGCTTGCATCTCT
TCCTTACTCTTCTTTGCTATGTATGTACTAGAGTGTATGAATGATGGAAA
AGCCTAAACTAACTAAAGACGAGACTAAAGATACAATTTCTATAGTTTGA
CTCGCTAATGCTTGAGCTAAGTGcctgaattttaaaattgtcTCTGCCCC
GATTAAAAATCGAGTTAAAAGTTCTAACACCGGtgagttttcaaaatcaa
agtcGGTTAAATAGATATTTTAAAAACTCCACAAAGTCATTGAGACCATG
GTATGGATTGAGATGAGTTGGGTTGCAAGGTGATCAAAAATATGATAGCT
ATGTCTTAACTTTATGACGGttgaaacagaaaaaaaaatagattaaaTGT
TTTATATTTACATCTTCAGACTGGTATTCGTAATCAATCGCAATCACAAA
AACGTCGCATTCTCGATCTTGAAAACCAATTCGAAGATGCTCGAGTACGA
ATCGATAAACTTTTACAACGAAAATCGATTCGTCGAAATACATACGATTC
GGTATCGAATTCTTCATCGTTCGTGACTCCTTCAGCTTCGTTTACATCGG
AACGATCTTCGCATTCATCAAAAATGAACATCGATAGAAGCGATTCAATG
GATTCGACGTCCTCAACAGAATTACACAAAACACAAATCAACATCAATCC
AGCGAATAATACTAAACAAACTTTCGGTACTGTTACACTTACAGTAAAAG
TTGATGAAGATTAACGGGaatcgattgattgattgattgattgattgatt
gattgattgattgattgattgattgattgattgattgattgattgattga
ttgattgattgattgattgattgattgattgattgaatgattgattgaat
gattgaatgattgaatgattgaatgattgaatgattgaatgattgattga
atgattgaatgattgaatgattgattgaatgattgattgattgattgatt
gatctgTTGACAATGAAGGATCAGAGGGTAATGGTTCAAAATGTAATGTT
TATTCTTTTTCACGATATTACAAATATTACTAACCTCGAATTCGTAAGGG
ACTGAAAAATCTATTTgcaaaaaagtgacaaaattggTACAGATCTTTCG
AAATTTAGTATCTGATATTTCCCTCTCTTATCCATTTCTACCTACGACTA
catataccttattacacgaatatcaCTATTTACTATTTTATTACCacgga
ttgaaaaatttcgtgttaataaaaatccccttaattaaaaccagtcATGG
TGTcagtccttgaaaaagcaataaaattcgtgttaatttttggagtgtta
atttcaaggccgttgaatacttgcctagtaatattcgtgtaacgTGTAAT
AGGTATTATCCTCAATTTTCTAATTAAAATCAAGCGATCTTCCAAAAGTG
CTGCATTATTGCAAAGTATCATGAAAATGTATAAAAGGGCATATTTTGTA
CTCTCCATTTCGATTACTATATAATATTTAAATGGTTGTTAAAATCATCC
AAAGACCCAGAACAACCTGGAAAATGTCTACCCAGTgagaatttcaacgt
aacttGTTTAATGTATATTATAAATTTTCTAGGGATTATTTTTCATGGAT
TATTTTTCTTGTGATTATTATAATTAACAAAATTTCcccgtttctttttt
tttcgctcATGTTGTACAATGTTTAGAATTTATATAAGAGAAACTTACGG
TTTATATAAAAATAGGTTATAGGGTtttttaaacgaaaaaaaattgtttt
gttctttatttatgaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058490TCONS_00058490Clytia hemisphaericatranscript
TCONS_00058491TCONS_00058491Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058490-proteinTCONS_00058490-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1197463..1206780 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.49	43	34.72	36.06	5.68	4.15	18.64	18.67	20.09	17.88	16.5	12.02	22.63	15.39	13.41	16.61	25.94	28.18	18.99	29.49	40.51	34.73	52.76	53.4	34.86	34.41	79.74	86.89	29.32	36.95