XLOC_036838 (gene) - C. hemisphaerica

Overview
NameXLOC_036838
Unique NameXLOC_036838
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:703794..711491+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036838 ID=XLOC_036838|Name=XLOC_036838|organism=Clytia hemisphaerica|type=gene|length=7698bp|location=Sequence derived from alignment at scaffold_311:703794..711491+ (Clytia hemisphaerica)
GTATTTTTCAgcattatataaaaaataaataaaaaacaaaaaaatatggt CAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGAGCATGCGC GAGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaacatATGTG TTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCGTTAGTGATTTCA TCTTTTTGCCGCACAAGATTTTTCATGAGAATGATGTTTGTTcgtttcat catgaatattctgaACTTTTTGAGTAGAATCATCCTAAATTacacatttt attttataagaacatccaaaatttttgaagcctttttaACTTTAAGTTCT TAAATGAGTTTTAAGACTAAAAATGTATTATTTCCACAATTTTTCGAGTA TTTTCGTCCATTTTGctaagaaattgagtgttttagggtctacaaagcct taaaatgttcttaacttgttctttagcaatatgttcttatatagtttgtt cttataaaaaacggtGTATTCTAATGATATTCTTAGTTAGGATCCAAACT CAACCAATAAAAACATGTAATACGCATctgaagcataaaatggcattttt gtgaatgTATTGCGAGTCCTACTGTGAATTCGATTTGGAAGCATTgcaga ttttgaaagttttgcagaaattttcgcgagcataaactttcgcaaatcgC CTCTTTAAATATATTcgaagacatttactttcgcgcaaaaggccaaaatt cgtgGAAATCgagaaagtttctgctcgcgaaagtttgtactgAAGTACAG GcgaaataataatgataatgtCAATCAGGCCCTTCAAAATAAACCAATTA TTATTCCGTAGGCGACAGCAAAAATCACTTGATATTTCTTTTAAACTTAC AGCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGTCGATGGTC AAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCACATGAGTTT GGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGATCAAGTGGT AGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGATTTACATGG AACCAGATTTAGAGAAAAAGGTGTGAATGTTACTTTATTCTGACCCGTTC AGTNGTAAGCGAATGGTAGGAGATATGTTAAATTATGTCTTTTATAGTTG TAGCAGACTCTGTTTCTGATGTATTTTAATTGCTATAGAATACGTTAGTC AGGTAGtgttatttttacaaattttgatcttGAAGCTAAAAGAGGCAACT TTTTCATATTTGGTGGGCTCACAAATCCATTTAATTaccttgaaaagaag aaaaatcttttctatCTGAGTTCTAGTTTAGAAGCCCGATTTTCCGCCCT ACCAACTGAATATTAGAGTAGTCGAAAagtgagtagaaagttttatttca caattagaataggaagggcgaaaagtgggccatCCAAACCATACaagttc ttttataaaaacatccaaaattttttaatccttcggatgttcttaacttt ttttaagcctaaaaatgttcatattttcaCCATCATGTTTTTGGACATTT CCCTAAGAGATCATTTTGTATAAAGTCCACAAAGCCTGAAagtattctta acttgttcttaatattttggccatcaaagccttctgttcttatataattt gctCTTATTAAGAAAACGTGTAGCTAATGTATGAACAGGATATTATGTTG ATTATTCTGTATTTTTCAgcattatataaaaaataaataaaaaacaaaaa aatatggtCAAATACATACTTCATTATTTCCCAGTGGTTGGACGAGCTGA GCATGCGCGAGTGATGTTCGAATTGGCAGGAGCTGaatatgaatacaaaa catATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAAAAATCATCGTTAG TGATTTCATCTTTTTGCCTCACAAGATTTTTCATGAGAATGATGTTTGTT cgtttcatcatgaatattctgaACTTTTTGAGTAGAATCATCCTAAATTa cacattttattttataagaacatccaaaatttttgaagcctttttaACTT TAAGTTCTTAAATGAGTTTTAAGACTAAAAATGTATTATTTCCACAATTT TTCGAGTATTTTCGTCCATTTTGctaagaaattgagtgttttagggtcta caaagccttaaaatgttcttaacttgttctttagcaatatgttcttatat agtttgttcttataaaaaacggtGTATTCTAATGATATTCTTAGTTAGGA TCCAAACTCAACCAATAAAAACATGTAATACGCATctgaagcataaaatg gcatttttgtgaatgTATTGCGAGTCCTACTGTGAATTCGATTTGGAAGC ATTgcagattttgaaagttttgcagaaattttcgcgagcataaactttcg caaatcgCCTCTTTAAATATATTcgaagacatttactttcgcgcaaaagg ccaaaattcgtgGAAATCgagaaagtttctgctcgcgaaagtttgtactg AAGTACAGGcgaaataataatgataatgtCAATCAGGCCCTTCAAAATAA ACCAATTATTATTCCGTAGGCGACAGCAAAAATCACTTGATATTTCTTTT AAACTTACAGCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGT CGATGGTCAAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCAC ATGAGTTTGGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGAT CAAGTGGTAGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGAT TTACATGGAACCAGATTTAGAGAAAAAGGTGTGAATGTTACTTTATTCTG ACCCGTTCAGttgcaatgggcttttccagaaataaattttacccccactg tcgaggatattaatttttcgaagtattgaaccccctggatatcctacttt attagtaaagacatCCACTCTtgaaaatatgctcaaccccctggatatcc tctcttataaggATGCTTACCCCTTGATATCGtcttttttacttgaaaag aaaCTCTACCTCacggatatccgctcccttgtagatatttaaccccctga atatccgatatcctcaacggGGGCacggatttttttctggataaGTCCAA TCTTGGCACGAGCACTTTCAAATTCCTTGTCGGGTTTATAATATTAAAGC TTGGAGAGGGGGGTTGGTACTTCGACAAAACAGGTGATGGGTATGTACGA TTAAGGTAACCTTTTTCATATCTCcaaaagtccctcaaagggatAAAAAT TAATAGGTTATCgttttacttcgaataaacgcccctccaaATAAACCCCt tggaggggcgtttatttgatcCAGGTAGCAGTGAGGAAGtataatatgaa aaaaatctaattttcgcATATTTACGCATATTATTCTCttcctttccaaa aaaaagcaAGCTTGAGTCATAATTTACACTTCTAAAATGGATAATGCATT TAAGAGAGGGACCTGCCTACGAGAGAGTTGCagaacattttattttattt attttataaaacattacctgtttctattgaaaaatgATGGTTCTTCTAAT TGGTAGTAAgtggaaaaaagcaaaaatcagaggataaaatttgatgaaag atAACGAAAGACTTGTTAACAAATAcccaaaacatatttttatctGAAAT TTATCATGTTAACAGTTTGATTGAAAAACGACAAATGAAGTGCTTCATGT TGAGGCGacgattttctgaattttagaaGGATTTTCTTGTGAATTGGGAA GTCTgtttctttgtttacatttttctatcTTCCTGTTTCTGTTTTGAAGA AATCAAACCTTCCTAAAACAGCAGATCTTCCGAATGAGGAAGAATTCTCT ATCTTCCCGTTTGAGTGCCGAAATATTTTCGAAACCTAATCGGGAAAATC TTCCCGTTCGCTATCCTGAATAAATTACTCTTAACAGATAGTTACATACC ATCGTGCAAAGTAAACACGAgtgttggatttttttttctcattgatCCAA CcttacgagaaaaaaaatctacagAAACTTGGTAAATGAGTCCCTGACTC GAGTCGCATCCATGAAAATCTTATTGAATTTGTATATGGATTGCATTTCT TGAAAGTGAGATAAAGTAAATATCTATTGGCTGTGTCAACCAATATATCC CGTACTTAATTTATGACCAAAAACTGTCAATCTTTTCTTTGTAGTAGTAT ATTTTGAATTAGCTTCCATCTCAACTACTTGTTTTTCCCCATGCAGTTTA AAtattaggcgaaattttcgacttaaaAGTATCGTCTTGTTTACTTTTAG AAAAGTGCATTGAGTGAATTCgctgaaaaattccaaaaacatTTGAATTT CATCGAAAGATTTTTGAAGAACAATCCATCAGGTTATTTGGTTGGAAATA AGGTATGtcttacattttttgaaaataaaagaatttttgtATTTCTTGGC TTACATGATTTTAATCGATCGGTCAGTTGGTTAGACGGGGCTAAACGATT CGTCTTTAAAGAAACCCCTTTCTCACATCCCCGAAAGAACTTTTTCCcaa agtggggataaaaatatctaGCGAAATCACAATGGGTAtatcattctatc tttctaAGCTAAAAAATCCTTGTCCCACAGGAAATTTTGACCTAATTTTC CAGTCGGACGGGGGTCCCACCGGTtctgtgacacaagggtgtTTCACCCA AGAGAGAAAATTGAGGACGTTCATCTAACGGTATTATTGAAGCGTTTGAT GAACATTATTCTAGCTTTGTAGTAAAGTACTTATACCACTCTTCCTCTAT GGATTTCCCCACTTACGTTTGATCCCTCTCTTAAACCCTATTAACCCcaa ccttttttatttttgtagccccagggggggtagaatctacctcgattatt tttgatctaatAGAGCTATGACCATGAAAATTGGTACAGATATTCTCCAT CATGACACAAActttcagaaagaaaaaaaatttgacttccacctgtcgga aaaaagcaaaactatatggtttacaaaaatgtctctCACAGTCGAAGCAA TAAAGATATtgagattctgtttgaagattctgaaagataaaaggttcttc tttaacataattgccggttttgtaTTTCCCATTAAAACTTTATGCTGAAA ATCTATGCTGAgaatgagtaaaattttcaaaatttgatgacgtcataaat aatgacgtcatcattttcatgATGTCATAAATGTCaaagattttttaagt tttttgaaatcaaattgttaatacctatcacgtgtcaaaatttgaatatg attggATCAATACTTCAGAAATTAtcgcaattttaaaattttgagtttta agcgattttagcttggtttcacaataaagtcatgaGAGCTGACCTAGAAG ACATATGACCCTAAAAATTTACACAattactcttaataagattttattaa aagtcaaaaagtttcaagtcgtttcaaaatttttactccgaaatatacac aaaagaacacaagtgtggtagattctacccccctggggctaatagggtta atagaccttttcataaattacgtcactgacatcacttgcctcgttttaaa attatttgcaTGGTGATTTACTCTAAGCGGATTTTATTGAATTAAACTAC tatctattcataaaaaaattatttaatgtctcaaggtaTATATgtccgtg acgtaatttatgaaaaggtcagAGAAGtaccaagtaccattttgaacGGG TTTTGCATTAAGTACAGAGTCTTTGGTATAAGCCGACCGGGGAGTgcata gtttctaccccctaTATTTAggggggtcttgggttttgacgaaccaaaag caagggggaTGTTAAAAGTTGGACTTTCCTAATGAGGGGTTGCCAGTTAA GTAGGGgtcttcttacctaagggggagggggtcttcttagataaggggaa attttctttgaattatgactcttgtacaatcgtttcatttaaactgattt tctaagggaagtgtcaaattttaaatgaatttcctaaggggggttagcac ttaagggggggggggtcctcttacctaagggggagggggtcttcttagat aaggggaaattttctttgaattatgactcttgtacaatcgtttcatttaa actgattttctaagggaagtgtcaaattttaaatgaatttcctaaggggg gttagcacttaagggggggggggtcctcttacctaaggggggatcttgac ccctctagaaactatgtcggagtgaacccatgaccctgtaCACCTTAACT GAATGCTCAACCTTTACACTACTGGTCGTTGACGTGGTACTACATACCTA CTTTTACTTTTATTCATTTAGATCACTTTAGCAGATATTTGTCTATTCGT TTTCGGCGACATTGTCACTTTCCATTATCCAACCTTTTTTGATAACCAAc cagaaatcaaaaaattcatcAGCCGTTTTCATGAAATTGAACAAGTCAAA AATTATGTGGAAAAGAAACGAACCCATAAAATGCATGTTTATTGAGAAAG AAAGTGTCAATCGTAACCATAGAAACGGACTTAACCCAAGAAGGGATTCT GGGCAATTTAGAGAGAACTCTTATGTTGTTTCTCAAGTGCTGGTAactag atacatagatacactttttatttaaaatacaTTCACAAAAAGGCTTACGT ACTTTTATTTGCAACatcattttttaacattttgtaatttttttggtcaa atATTTCTTATAGGTTTTTATTtagtagaaaaaagaaaatacattaattt taaatttttcttatgtGTTCCCATGATGAATATAATTTGGGACTGTTGTT GTGTAATTTCCTAAGATTTTGGGTGTTTTAATGTCCATAGACTAAAAAGT TATAAACTTGTTCtcaaagctttatgttcttataagaaatgtATATGCAA GATACCGCAGTCTTTGTGCCTTACAACACTGATAGTAGAACATCGAATTA AAAAGTAGGCTACGTCAACCTGATCTTAAAAACTTCGTAGAACgttttag aaaattaaaaaagtaaagaatCATTTGATTATGAGAGACCTTAATTGAAA ACTTACATATCTTTCAAGAATAATAATGAAAACTTATAGATACAGTAGTA TTAGgcctttttataaattattttgagtgcaacgatagcctcgttttgaa accattaccaagctTATTAAATCCCTTCGTCCCTTGATTCTTCAAATGTT ACTTTTAAAGATAGAGAAAACTTCTTGAGGAACTCAAAATGAACCTGGCA ATactttgaaaacgaggtaagcgatGAGTCGTCGAGTCGTCGATTAACCA ATTTTAGCATCACGTCAAATCAAATTGATTTATAAACGCATTATACACAT AAATACCCAGCTGTTACTGTTTCAATATGAACCTTCATGATGTATGGACA TTGGTGAAAGTTAGATGGACATTAACCCTATtcgaactaggggggggggg ggctctttctgttcggaggtcaaactattggtaatagctcctgaaataat agagcttttgccttgaaattttctgtaaattcctaacttttattttgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058460TCONS_00058460Clytia hemisphaericatranscript
TCONS_00058461TCONS_00058461Clytia hemisphaericatranscript
TCONS_00058462TCONS_00058462Clytia hemisphaericatranscript
TCONS_00058463TCONS_00058463Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058462-proteinTCONS_00058462-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:703794..711491 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.95 38.86 21.14 18.31 2.46 1.54 4.57 6.66 7.46 7.02 8.43 6.72 20.86 29.13 15.99 15.72 4.27 7.3 2.8 5.45 19.96 23.73 16.35 16.28 8.64 10.2 1.58 1.87 3.68 4.31