XLOC_036830 (gene) - C. hemisphaerica

Overview
NameXLOC_036830
Unique NameXLOC_036830
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:530636..538019+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036830 ID=XLOC_036830|Name=XLOC_036830|organism=Clytia hemisphaerica|type=gene|length=7384bp|location=Sequence derived from alignment at scaffold_311:530636..538019+ (Clytia hemisphaerica)
ATGTTGAATGGATTGAACCCTGCTTTATTTAGTGAAAAGTATGATTTTTG TTTCTTAGAATAAGAAAGAAATATAGAACATGGTTCGAAACACAAGACAA AATTTAGAAGATGAAAAGAAGAATGGAGATTCTGATTTCCAGTGGATTGG TGAAGGATGTAAAGTGAAACGTATGTGGCAATATCGGTAAGgcatattat ttattattttgtatacaaaaaattgtttctgTCCAACCGTCTCCTATCTG GAGATCGAGAAAGTTcctagaaattaaaaaatatgaaaaacttaGATTAA ACTTTATCTCCGCAGTTTTACTTtcccttttattttgataatccgAGAAC CTATCTAATACTGCCCGACTTATATCGCCCTGCCTGAGTGACTTACAAAC ACCCTTTTGACCTCCTCCGCCCTAGTACAATCAGGATCATATTATTACTG AGCTCAACTTCTCTAAATATTTACGTGTAGTGACCTTCATTCAATGACTG CTTATCTTTCCAGACGCCCTTTATTTAGAGATAATATGAAGCCGAGAGAC ATAGCTAGAGAAATGGCTGAAACGACCtagcaaaatttctgaaaaaattt gagtaatAGCTATGAGGCTACATACAGCTTCTCTGTCCAGTGTTTACTGA ATTTacattttcacaattttgattAAGAAAAACTCAGGTTCTAGAGCTGA AATTGGCTGGAGCAACCCAATTAACTTAATCGAGTTTGATCTGTAATTTT GTGAAAGTTAAAGTGACTTTCATGTCTTAACTGATCTTATGGCTTTAATT CTTGTCAATCGATCTCTTAGAATGGATTAGAATTATCTATCAGAAAATTC TTTTGTAGATCATACACAGTGAATGGTTTAGTGAACTGACTGGTCCcaca aaattatattgttctttGCAAGTAAACCTAAACATACAAAAAACAATAAG GACAGATAAGGATAGATTCGTTCATCTTCTTTGTATTATTTTTCATCTAG ATCATTCAGAGTGAATGGTGTAGTGGTCACACTGAGCGACAATGTTCTCA TCAAACCAGGCAGTCCTATAGTAAACCTTATAAGATTCCTTCATGTTTTT AACCTTCTTTTTCATCTAGATCATGCAGAGTGAATGGTATAGTGGTCACA TTGAACGACAATGTTCTCATCAAACAAGGggatgacgatgatgatgaaga TAAACAACCTGCTCTTGGTCAACTCTTGGAGCTGTATGAAAGCATTGGCA ATGATCCGAACAGAGCCAAAGTTCGATGGTATTTCTATCACCACGAGATG CCAAAATCCTTCAGATCACTTGTCGGTAAGTAAGCTCTAGTTAAGAAGGC CGACTTTCTTCACTGCTCTCTGCACTCTTATTGTTGGAGTCTAATAAGTC AAATAATTGggcaaaaaattgacactttgaaatcttttcttGAAAAGACA ATGTATTGACTTCAGGCCGAAAGCTGCTAATTCTAAGGAATAAATAAAAC AAGGGGCGTTgaaattagtaatcagaggtGTCGTTTTGCGCCCTTTGTAT TTTGATGCCACCCCCAAATAATTGACCGCTGGGGGACTGCACCACTGCCA CCCCTGTCACCCCTGTCACCACGCTACTGTTCTTAGCCTTTTCTCTTTTA GAACCAGAAGAGCAGGAAGTGTACACGTCTTTGGATGATTCACATGGTGG TGTTGAAGATATTGACGCTGAAACCATCATTGGTATGTCAAACTTAAACA TGTTTTTAACGTTTCCTTTCCACACTATTTCAGCTTTTAACGTTCTTTCG GATGGTTTGGTTTAAACAACATATGCTAGATTTAAAGCCGTtaattcaat tttgatttaaagtttgatgacgtcatgaaatatcttttgataggAACTTT TTCAAGTCATCTTTTTATACCATCatatttaaaactattttcataaaaac aaatttttaccACCTACCCAACACCCTTTACTACTGCTCGAAACTTGGTT TTGGACCCTCTAAAGTATAATCTGCACCAGATTTCATGCCTTCATCagca tctgaagtattcttacgtttttgaATGGACTCCCCTAAAAAATGTGGGCA GATTGGGTTATACAATAATTTTGATGTCGATTTCATCAAAATAGGGGAGG CATAAACGCATATATTTTCGCTGTAAAATTAAGAGTGCCTTATGTCCATT TTTGACAATTTGAGGAAATAGCATTTTAAGTATTCTCATGTTTGTAGTAT TGGACATAAGGCACTCTTATTTTACAGCGATAAAATTATGATATGATCTT CGTAAAATCTTTCGAATTGACAATAAATCACACTTTTACTTGACAATTTA GGATATAATTTTTAGGTTTTAGATTTCCGCCTAAATTAATGTTTGTAAAA AGCAATCAGTTCTCGAAAAATATTTGCCctattactttttttttgtttcc acAGGCAATTGCAACGTCCACAAGTGTTTTGATAAAGAGCTCCCCAAATG CATTGGCGAAAGTGACTTTTTCACAAGGTAAAAACTTCCATCatcatttt ggttttttttgttttttatataaaaagggAGAGGGTTAACATTACCAGAG GCGACCGCACGCAAAAATTGAGATATGTTTTGACGTCTTAAGACTGAACA AAATGTTCCAAAGTAGTTTACTTTTGGCTCGAGTTGTGCAAATTAGTAAC CTAACCTAAAATTTGAcgttcaaatttcaaatctgACCCACTCGGTTTTC GAAAAGTGTACAAAAAGAACTTGCCACGAGAGGGTATAAtgtattcggcc taggggggagGGCTGTTTCTGTccggaggtcaaattattggtaatagctc ctgaataataaaaacttttgccatgaaattttctgtaaattcctaaattt tatttagcttcaaaatgaaaaaaaaattaacacctAAAAAtcttcacacc ttgagcatgatgacatttctgacagtaaggtgtcacaaaaattgaNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNccccccccccccgtttatttgatttgaaaaatttttccaacc cccccgtttattcgaaccccccccgtttatttggcacctaagagtaattt attgaaaatttaggctaaaataagcatttttgactcatgcaacttttttc tagagcctttgttagaatacaactatttaaaagaaaggaaattttaggtt tttgctcactttgtgtatgatgagtgacgtcatcaaaaacattttttgtc aaaagttgctttatatgacaaggatcttgtgtgccaaatttcatcctaaa agacccactagatcaaaagttgagaggtggtacaggaaaagccccccccc ccccccttttttttttgggggggttttaaaccccggggggggggggggtt ttcctttccccccccccccggaaataagcccccccccccccccgctagtt ctgaaccgcccctaaaagcctaggttgaatagggttaagacaTTGTCTGT CTATATTATACAGAGCTTGCTGCATGAGTGACTAGCCTAGAAACTTAAAG AGGGCGTTTTAATTAAGTACTTGCTGTAAAATTGCGACAAACACCACTAT AACATTTGacacaaaaggggaatttccaccaaactttaaaaccgcaagca atttttaaatgctttaaaacacGGTTGGAAAGTAAAGTAAACTCTGAGCT TTAACATTAGACTTCAGACTTAAGACCTTCTAAAGGATCTCAGGATCTGA AACTAAAATATATTCTAATATGGCTGAGAATACAGCCTGGAATCCACTTA AGCCCTCccaaaacgaaaaaatccaacgGAGCAAAATGCAGAAATAGTAA TCCGCGCCCGAGCTTTAGATTCCgaaaaacactaaaatacccaaatttgc gagtatatttcggcgctgattgAAACAgtgggatacaaaatcaaaataaa tatcaCATATCCCAATGTGCAAACCAAAACAAGTATTGGTAATTCAGGAT AATATTAATTAATAAGGTTGATTTGGCACGTCATTTCTAGTTGTTTTGTT CTATGACAAACGGttttgtagtttttttgtttactttttaacgCGTTCAT GtccttttaaaggttttgtttataaataagagtgatatcttTTGCTTACT CCTCATTTTTAATATACAAGtcttttcacattgaattgacaggGATGTGG GGCAAgcttggtcagaaagaggaaaagaaaaatttttttttgcatatatC AGCACAattataacaataggcagacactgtcctgatatgaaacatgtgtc tgatatgaactatgtgtctgatatgaaacgggaacacttatgtaaaataG AGACTTTAAAGTATGATGAAAGAGGACTGTGGGTTTTCAATACTTGTTGC AAttgtaaaaaattttatttgattttcagatatTGTTTTGGAGCAGGTCT TGGCATCAAATGTTTCAAAGAAGAAAGGACACCTAAGGGACCAACGAAAA TTTGTAAGGCTCACCTAAAATTTTGCCTGAAAGCACCTATCAGTTTAGGC CATTTTTTACTTCCTATATAATTTTTGATAGAGAAGCATTCAAACTCTCA TTACACTCAAGGAACTCtaacaattgaaaattttgttcttaatttttttt ttgctgcgACTTAAAAAAAGTCGAAGCATCTTTTCTTCTTACTGAGATCG GAACTCCCTGTAAAGTCCCTTTTTCAactttctcaaaaactgaatcttga aaatgaataaatttcttttcaccGGTTTCACCTTTAATATATATTTTAGC CAAATCGAGTAAAAGTGAGCCACCAAAAGCTAGAAGGTCCCTCATGCCAA ACCGTAAACCATTGGAAGCATTGGAGAACAATCCTCTGAATGGTTCACCG AAACGTAAAGGAAGCGATAGTGTATACAAAGAATGTTCAGCACCTCCCGA TAAAGTGAAGAAACGTAACAAATCCTCAGTATCGACACCTTCAAGTCAAG CGATGCATCGACGTTTCAGTAAGTTTGTTGACGAATTATTTTATGTTGCA GAAGATAAATTTTACAAGAGGCTATAATAAGATTCTAGTGTGATTTATAC CGGGTgcgtgcgccacaaaaaagtctTTCAAGTGAATTTTCTGGAGAtct aaacattttgaaaaaacaaatttttttcattgaaaagatgaaagattaac ttaaattttgatgggtcatttattaaatttggttcatAGTTTAATTGCTA AGAAATGCTCTAATTTGTGCAAAAGCTATCGcaatattgaaataaaagtt tgataggttgattttttacgtttttagcactttttggaagtaactttttt ttaaattgagaataagttttgatctaatggaccaaatttataaatgactc cttcaaaatttaagtttatccttcttCTTTTAAATGGGAAAGGGTTCGTT CTTTTAAAATCAAGTTCAAAGTTCAAGTTTTTTTTGGCGCGCACCCGGTA TTGTTTTAAACTTTCATTTTGAAGGTTTTCTACTACACTAGAGTTTCAAA TAATGGAGTCTTTTAACATGTAGTAAAACGAAACAATTCAAATCACGTGT CAAAAAAAGCTCATGAAACAATAGAGACAATCGGAATGTTTATTTTTGAC AATATTAttcctttttgattttgtgttaCATTGTATAGAATTTAGTTTTC AAACTAATTTAGTTTTCAAACTAATTTAGTAACTCTTTTGTGTCCCTTTG ATGTTTTCCCAAAAcaacaggaaaatttttttacgtTGTTGCCCTCTTTC CCCTTTCCAGGTACTCAACAAGCAGTCAATAAACTTTTAGACTCAGATGA CGAGGATCTAGGTAGCCTTTCTGACAGCTCAAAATCCTCAATCAGTACAC AGTCTAGTGTCAAATCAAACGCAAGCAGTCGTTCCAACGCATCTTCGAAA AGCTCAAAACGCTCGAAGAAAACTCAATCTGTTACAACAACCAAgatcaa aaataaagaagaaaacatcAGAACAGAAAATTCAACCGTTGCCACTAGAC GAAAAAGCTGTATGCCAGCCTTTGAAGCAAAACAACCACCTGCAGTGGCT AGAGTGACACGTTCAGCTATTAAACTACAGCCTACGCCGAAGTCTACTTC CAAACAGACTAAGAAACATAACAAGAATTTAACAAGTCATGAAGTGATGG TGAAAATTGAACAAATGAATCTGGTGGATGAAAAATCACGATTAGATTCA GATGTCTTCGATTTCGATAACGAGGAACAGGTCAGTCAAACTTTTTATAA CAAACCTACAGcggccgtagcatgaaggtagagcatccagctacggtttG CAAGATTGTGGGTTctatccccagccgggtcataccaaagattcctaaAA CGGttcttgatgcctctctgcttgatgctcagcaattaaagagacGGACT AAGGGTAAGTGGAGACATCCAGGGTAAgtagtggcgccctcccctacctt cgggtagacagctagagaaaagggagcctttgggtcgcccTCGACTTACT TATACCAAACCTTCTGTCATTTTCTGAACGTTTAATAATTTAGCATTGAA ACATTATGTTCTCCTGTTGAAGAGATAAAGGTAAGAGCAGTTATGAGTTT TGGACAGTAGAGAAACTATATGCCAATGTATCAAATTAAGATGaatatga aaaaaagattttgtacGAAATTACCGAATTTGCCGAATTTCAAAAACTTG TTAGCCgaaatcaactttttttaaccgaattcgttaaactttttttgccG AAACGTTTTGGATATAGCTGAATTTAAACGAAAGGATTTAGCCGAAATTC GGTTATAATCTTGAGAAGATCCTTTAAAGACCTCGGAAAGAAAAAAGCCG TCATATTGATCTCAACCATGTGACGTCACGGGCTGTCATATTTTTTTGTC CCCAATCTGAAAGATTAACCTCAGCCAAGTTGTATTCTGTGACCAAATAC TTAAACGCGAAATGGCTTTCTTTTAGGAGGACAAGGCGCCGATATCCTAT GTCACACGATCTGGTCGGAAAGCGAAGACCACAAACCCAAATGTCTCAAA ACGAGAATTGTCTACACGAAGTCATATCAAGGAAGACGATGATGATTTtg taaacgaaagtgaaagtggtgAGTCGTCAGGTGAAGaagctgaaatcgaa agtgaaagtgatggAGACGTCAGTAATTCTGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058448TCONS_00058448Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058448-proteinTCONS_00058448-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:530636..538019 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.26 1.32 1.19 0.98 4.28 3.64 3.06 3.27 1.5 2.81 1.82 1.47 1.31 1.14 1.75 2.99 2.96 2.89 0.74 1.51 1.41 1.41 2.3 2.34 2.33 2.03 0.83 0.69 1.63 1.77