XLOC_036582 (gene) - C. hemisphaerica

Overview
NameXLOC_036582
Unique NameXLOC_036582
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_304:262966..272166-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036582 ID=XLOC_036582|Name=XLOC_036582|organism=Clytia hemisphaerica|type=gene|length=9201bp|location=Sequence derived from alignment at scaffold_304:262966..272166- (Clytia hemisphaerica)
GAAAATTTACGACAGAGAGAAGGATATTTTTTGGTCTTACCTTCAATGAA
ATATCCATATTCAGAGAGCAAATTAAAACCCATACAAAAGGTTTGTCTAA
TGGGTGCTTTTATATTCATGTTTAAAGTGAAACAAAAACAGCAAAAGATT
TTGGAAACAAAAAATGGATTTGTAAAAATTAAATCTGTTCTACATATTTC
AAGAATTAGGGCTGTTGTTTCTTGGCATTATATCAGATCATTGCCGTATC
ATTATATGATGTATAACTCTAAATTTATCATTTTATTCTATGGTAAGAGA
AGGGGTCACAAAGACTGGGGTATCGATACTTTTAAGAATAGCCCTGACTC
CTATCAAATACTTTGACCTGTTTGGAAAAATTCTTATTGTTGAAACAAAT
TTTTATTGCAGGTCTTAGTCCCGACATCGCTCAACGGCAGCACGATGTCA
AAGAAGATAAGCTTCAAAATCTCCTTCAGGCTAAACACTTCGTTAAATTT
GGGGCATCAGTTTATGTCAAAGAGATCGTGACAAAACTCAAAAGCAGGGA
GGATTTTAAACAGTGCGATGCTTTTGCAGCACGGAATATCCTCATGATAT
TCACTTGTTTTGTCAATGGGCTCAGGTAAAATATTTGTTAGATATATCAT
TCTTTCAACTAAAATCATGCATCGGTCAAACTAAACTTTTTTTCGAAGAA
TAATGTATTTTAAGAACTTTTTCGGGAAAGAGCGAGAAAAGGTAAAATTT
ATAGCCGAAAGTCAAAAATGGGCTAGCAACTTGGCTTTTGTTCAATCAAA
AAATGAAAGCAATGATTGATGCAATCAAATAGAGCTTGAAATTCTTTTTA
CAATATATTGCACCAAGTCTCCTACTCAAACTTACAAAACGTCACAGTTA
TTTTTAGAAACAAACCCTGTCACAATGAAGCTAGTTATCAATAAACTCTG
TTATTTTTACATTCTGTTTTGTTCTTATATTTTAATCAATAGAACTTCAA
ATTTAATGAACATGAGCATCCAGGATTTCGAAAAAGCCGAGTTCGACAAA
GAATTCCATGCATTTGTCTTGAATAATCGTTTATATAAAACAAGTCTTCT
ATACGGCGCAAAAATCATTGTGCTCTCTAAAATACTCCATCGAATGTACA
AAACTTATTTCAAGAATTGTCGCCCTTTATTGTCAAAAGATGAAGGTTTC
AGTGATGCAAACAGGTATATTACTACTTTCATTGTGCCTTAAAGTTAAGA
CATCGAAATTAGTAAAAAAACATCTGATATTCGTTTGCCCTAGCCTGGTG
AATTTACTTAATAGCAACAGAAAAAGACACCTCAATCGGATGAGCGTACT
GTTTTGGTGCAAGAAGTGATTGGTATCTCATGTGTTTTTACAGGCCAATC
TTTCCGTCGAGCAAAAGTGGGGAGGCTTTGAATCAAAATGGTATCTCAAA
AGCATTTCAAACCACTTTTGAAAGATCCAAGATTCTGGAAGGCACCTCTC
GATGAACTTGAGTCCAACACGAATCCGAATCGCAATAGCCACCGAATTCG
CTCATCACAAGGGTAACATACTATTCCTTTTTTTTTAGAAATAAAAAAAA
CTGTGCGAGCTGAAACAGATTCAAAGCAACCCAAGGCACCAATACAAAAA
AAAATCAATAACGTTCAATAAATAAATTAAAATTAAAATAATAATGTTCA
AAATTTTACTGTATCATCAGGTGAAGATTACAATCGCTTTGCGGAGGTGT
TTTTAAAACACCGCCCATCAACTAGCAAGAAATTCTATGTACAACGCTTC
ATGCACCGTGATGCCATCATGATGAGCATGAAGTGTTACGATGTAAGGTC
AATTTATTTTAATTTTCAGATATGTGAATGCTTCTATATTCATGACGTAA
AATACTTCTTTTGTGGTCTCTATAAAAAAGATGTTGTAAAAATCCTAGAA
ATCTCATTAGATAATACACGATTAAGAGATTTATTTCTGAATGTCAACTT
TTGGTTTGTTTCAGGTCTTTGAGATTGATAAATCATTGCGTGATGCTGCC
ACTTCTTTTACGAAGAGTGTCTGCAGGATCAAACCAAAGTCAAAGAAATT
ATTTGAATGGTTGAAACAGAACAAAGCCATCATCAAAGAAGAGATAGGCG
AAACATTCACGGACGAAGAAAATGGATCAGGAGCTAGGAAAATTATTATG
TAAGTAAATATTTGATCTGAATTTCTTTTGAAGCGTTGTTTGAACATTGA
ATTGAATAGTTTAACTAATTGCAGTGTAAATTCCATGTTAAAGTTTTGCA
AAGAAGGGTTATTTTATATCCTAGAATTATTCTTNTAAATTCCATGTTAA
AGTTTTGCAAAGAAGGGTTATTTTATATCCTAGAATTATTCTTCTATTGC
GATTAGTTTTGAATTATATATATTTTTATTTTTATTTTTGTAATTGTGGG
ATTGTGTATTTGTTGTTTTTGTTTTTTTCGCTGTGTTAATTGGTTGGTTT
ACCATTTTTGTCCTTGTTGCGTTGAGTTGGTGAAATAATTTCTTCATTTT
TTGATTTGACTGTTTTGGCATATAACTTGAAATGCGTTGTTTCTGAGTTT
TAATTAGCTTTTTCAGATACAGTATAATATCGCTCCCTTTCATCTATTTA
CCTGAGTCGAATAGTTTATAGTGGCCAATCACAGCTCCAATTCCCTTTTT
TTATTTTTTGACGATGCAAAAATTAGTTGTTTTTCTCTTTGCAAGTTTTT
TATCCATGGAATCACTTGAACTTGCTTGGCTGCTTAAATGAATCCCTGAT
TCATTTTCAAATAAACTGCTTAATTTCTACAGCAATCTGTTGGTAAGCGT
GTTGAATTTATTTTACTCTTTTTGTACATTTCAGCATCAACCAATGAAGA
CAAAGAAACAGAAAAATCAGTGAACAAAATTCTGAATGAAGACATAGAAC
TTCCTTCTAAAAAGGCAAAAGTTGATGGTAAGCAATATCTTTTGAAAATT
TTTTCTGATGATAGAAATCTCTAACGAAAAACAATATCTAAGTTGATAGT
TGATATTGCTAAACTACTTCAAAAATTTTAGCTGCAACCACTAAAGATCG
AAAAAGCGAAAGAGTGGCGGAAGAAGATGAAGAAAGAGATGAAGTTCCTT
TAAACAAAACCAAAGTTGGTAAGCAATGTCTTTTGAAATTATCACCTGAT
GATATATATATCTAACAAACAATATCTAATTTGATAGTAGATATTATGAA
ACTCTTTCATGAATTTTAGCTGCAACCACTAAAGATCGAAAAAGCGAAAG
AGTGGCGGAAGAAGATGAAGAAAGAGATAAAGTTCCTTTAAACAAAACCA
AAGTTGGTAAGCAATGTCTTTTGAAATTATCCCCTGATGATACATATATT
TAACAAACAATATCTAATTTGATAGTAGATATTATTAAATTATTTTATAA
ATTTTAGCTGCAACCACTGAAGATCGAAAAAGCCAAAGAGTGGTGGAAGA
AGATGAAGAAAGAGATGAAGTCCCTCTAAAAAAACCAAAGTTGGTAAGCA
ATGTCTTTTGAAATTTTTCCCCTGATGAAAGATATGTCTAACAAACAATA
TCTAAGTTTCTAGTTGATGTTGCTAAACTCTTTTATAAATTTTAGCTGCG
ACCGATGAAGACATTGATGGTGACCAAACCAAAACCAAAATTACAGACAG
AGATGGTAAGGAAGGCGTTTCTTAACAAATCTTGGTTCACTAATGTTTAA
CCTTTTCAAAATTTTGGATCTTCAGACTAAGAAACAAATCTAAAGATTTC
AAGATCTGGATAGGGATTGTATGAGGGTATATCTCAGTTTGAACTTAACC
CTAACTTAGCAAATTGAATATTATTCATCCCTATTATCTAAAACTTGAGT
TCAACTTAGTATAATGATTCAATCAGACTGTTTTAATTCTTCTTTCTTTT
AGACAAACATGATATTCAAAAAGGTGTTGATTTTGGTATTCAATTATGTG
TTGACAGATCTCCTGGCGTAGTGATTGGTATACAATAGTTTTAACTTTTT
GGAAGAAAACAGTTCACAATATTTGCTCTTACGTTTCGTAGGACAGGTAG
TGAAAGGGTTTTTAAAAATGCCAAAATGACCCCTGTTATCACCTTTGAGT
GGAATTCACAATTCAGTGTTCGCAATTCTTTTAAAGCTAATTCTGATGAA
GAAATATTTCGAAAACATATAAATGTTGGGCAAAGTAAGACTGAATAAAA
GGTCACATGAAATCTGAAACTGCTTAAAGTATGCAAACTGACTTGGTATT
AATAATACATTTTGCCATTTTCAGAATCTGTCGATGAGAAAACTCTTGAA
GCCTGCAGCCTCGGCTTGATTGAAAACCTGTTGAGGGAAATTGCAATCGG
TATGAATTGATTAAATTTGATTTTCATTTTACTTTGAATATATTATATAT
TTAGAGGACTAATTACCCTTTCATTGTAAGATCGTCTCTCTAAGAAGAAA
AGAATTCAGCAATTCTTATGCGGGTTTGTAGTTCTGACAGGAGAAAACAT
TTTTTTTCATATAATATATCTTTTCTTGTTATTTTTGTCCTCAAACGATG
ATCTATTTTAAATGAGAATTGAAACTTTGAAGATTTGTTTCCTGGTCTTG
TGGAAGACCATAGAACATCTCTAAATCTTCTGAAATGTCTAAAAGGCTAA
AGGAAGCCGCAAAAAGGGGTATTTTGAGGTAAGTTTTTGAAATGAATCCA
TTTCAAGCCATAAAAATAATACAGACCCGTGTTCCCATCTTTGGGGTAAA
GGGACTAAGAAAAATTTAAAACTATGGATCCTCAGCTTGCTTCCTTTCAC
TCCTGAGAAAACCTTCCTAAGATTGTTTTTTACAATTCTCTTCGAATTTC
TTCCTTAGACCTTATCAATGACGAGAATAAAAGGTTAAACGAAAATTTGA
AAAAGTATTCTGATACTCAAGTAGGTACGTAGCAAAGTTTTAACTTTAGT
CCCCCCTTTGAAAAAAGAAACTAAAGTTAACATCGGGTTCAACTATTAGA
ACTTTAATCAAATGCAGTCGTTAGACGAATGGGTTTAGTTCTGGCTGCTG
ATGTGCACCGGTTCCTTAAAGACTTGATTATTTTTAACTTTGGTTTTACT
CTCTATGCTACCGTCAAGGGCTAATACGTGATTACTGAAGCATCAATTAA
TTCATGATGACTAATTATTTAGTTTATAATGATTTTTTTCCACATTTAGT
TATTCCAATCAGTGTTAAAAAGGCTCATTATATTTTCAACATTTGCCAAA
AAATGACGTTGCAAGATATTGCCAAACATTTCTCCAACCATCGCACATTA
TTTAAACGTTTTTCCAGTGGGCAATGCGAGTCGTACAGATATGATGCATA
TTTTGGTATCCGCCCAGAGTCAACATTGATTAAAGTAAGTCAAGAATGGA
CTGCTTTTTGATGTCAGCCCAAGCTGGATCTTTCCAAGGCACTTAAAATA
ATATTTGATTTAATTATATGTTCCATTTTGAAACCTTATAGTTGAACAAA
GCATATATTGTTCAACGAACGGAATTAAGTTTGTACATTGTTGAGGGTAG
ATGGGATAGGTCTTTTAGGGTAGTTAAAATATTTATCTAGGGTTCATAGC
ATTTTCCTAGCATTAAGTGGTTTGTAATAATACACTAATAATATAAATTT
GCTTTTGGACAAATCATGTATAAAATTGCTCTGATTAATGTTCAATACGA
CTTTTCACTTCTTTTGAAGATCGTAAAAATCAGTGCATTTCTATGCTAAT
TCCAATATTTTAGGTTTTACTATTTTTTTCTTCAAACTGATACTATTTTT
AGCAAGGAGATTGTCGTATGAAAAGTGTGCGCATCAATATTCTCCCAAAC
ATGACCTCGACTATCATTGTCCATGGTGAGTACTCCTCAAAGATCTGTTA
ATGTTCGTGCTTATAACTGTGTTTCATTTTCAATTTGCATTCTTCAAAGT
TGTACATACTGCGAACAATATTCATAGTTTAAAAGGGGAAGTAGAGACTT
AGCCAAAATTACTTGAAACTTTAGGGATTACTTTGCAGAATGTACAAATT
CAGGGTCATGGAATTAAGTCATTTTACTAGGAGGTAAGTAAGTAAAGGTT
AGACCTCCAATAAAGGGAGGAATACACACTCCTATGCACTCTACTAAATT
CACAAAAGTAAGTCACTGTAAGATTAGGGCATAGAAAACATAATGAAAAA
GAACAATTTCTGGTAGTTTCAGTTCACTAAAGGATGATTCTTCATTTTAG
ATGTGTTGCGACCCGACATTGAGCAGTGTCTAAGCGAAAAGCTTAAGAAG
TGTCTTCCTCCATCGATAAAAACAATGGCCATTGAAACAGCCAATTTTCT
GATGTATGCACTTCTGCCATATGCGCTAAAGGTCATTATCATGGAGGAAG
CCGACCTTCAACATACGGAAGCTCAATATTTCTTAGATTTTTGGGAAGAC
TTGCGACACAAATCTCCTCAGGAAGGCAATGAAATCGGTAAATTTTAGGT
CCTTAGTTTTTGTGTATATAAATTCGATGACTATTCATGTTTCTTTTAAT
GAAACTTTAATTTTTTGTTCTTCAACTCAGACTAAAATACTTTTTCATTG
CCATTTTAGAAGACGAAGAAGGAGAAAGTGATGAAATTGACGACTACCAA
CCCACGATGATCGCTAAAGAGGATCTTAATATCAGTGAGTTATCCCTTTT
GAACACTACCCGTATTTTGTCACTTCAAAGTGCCATCAATTTCTTATTTT
GTTTCATCTTGGTTCTTGGGAATTTTAATATCAAAGTGACAAAGTTTGGT
TTAACAAATTTCTTGGATTCAAAAAATTTATCAATTGTCTTTTTAGGGTG
TGGTTTGAAACCATTTGAATCTGGTAAGTTTTTTTTATCTGACGTATCTA
ACATGCTACGATGCTAGAAAGGAACTTTTCTTTATATACTTCTTCATATA
CTTTATTTTCTTCATTTTTTAGAACAGCAGAAAGAAGTAGAAGGGGGAGA
CGAAGTAGAAGAAAACTACCAGCTGCCTAGCATGACACATAAAGGAAACG
TTTGTTGTAAGTTATTCATTCGTTTTGAACTTTCCCTAATTCTGTGTTAA
CTTTTTGGATCAGCGTTAAGCATATAAAGCAGGATCCTTTAAATAGAAAA
TAGTAGGTCAATTTGATTTTATTTCAATGTTCTTTTAATTTTATTTTTAG
TTGCTAATGTCAAACTTGATGATATCATGGCCTCTAAAGATAAACCTGAA
AATGAGGGTCAGTAACAAAAATTTTTAACACAAAGTCAACATTAAACACT
ACCTTTCATTTACTTTATGTAATTAATTTTCTACAAATCTGAGCGGAATC
CTTTGTCATTGCATTCTTAGAAAATCAAAAAAAAGAAGGAAAAGAAAAGG
AGAAAATGAAAGAAGTAGACCTACAAGAACAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAA
AAAAGAAGTAGGAAAAGTAGTAGACCATCAGCTGTCTAGCATGGTATCTA
AAGAAAATCTGTCTTGTAAGTTATCTGTTGTGAGCTTTCCATCATTTCAT
TTTAACTTTTTTGATCAGCGTTAAGCATATTAAGCAATATCCTTATTATG
AAAATGAGATATTGTCTCCTTCATTTTAATTCGATGCTCTTCCTATTTTA
TTTTTAGTTGCTAATGTCAAATCTGATGATGTCATGACCTCTAATGATAA
CGAAAAGCATGATGGTAAGTGGTATAAATTTTTATTGTTTTTGACTCAAA
GTGTCAAACCCAAACGGTCATATTCTTGTTACAAAAAGACTGCATAACTG
CCACTTCTACAGCAACCACTACGACTGAAAACGTCTAATTAACATTCATG
TAGTGTTAAATGTATATGTTAGATATATTCATAGTGGCTCTGGATCACTT
TGGTTAGATTGTAATCAATTTGACTATATCAGACCTGGAAACAAATCTTC
AAATTTTTCATTATTGCCATCTAATCAATTAAAAGAACACAGGCATATTT
GAAAAATTCTGTCTTATTTACTTTATTTTGTCGCTCCAGCATATTTTGTC
CCAAAATCTCTGTCTCTATCATATAATAATTAACTAACGTGAAATTGCTA
CAAGGTGTTTCATTCTATTCGATCGTCAGGCTGTTCGGTTTCGTTTTTTG
CAATATACCGTTTCATACTGAATTTACAACCTTAAAATTGCTATGTGCTC
TTACTTGCTTAATTATCCCGAAAAAAGGTTAATTAATTCACCTTATTTTA
TATATTTCCAGACTTAGCAAGGCCTAAATACCGACAGGAGACATACGATC
CTGAAGATTGGCACAAAACCAAAGTATTTACACGTACTCAATTGCTGGTG
ATTCTTTACATCGTACGAGAGGAATTGGGCGAAAAGAAGTTCGTTGGTTG
TAAAACATTTTATGGACTCCTTAAAAAGGAGTTAGACAAAGGATTTGGAC
GAGCTACGTTTTTGCAAAAAAATGTAAATTACAAATGGGTTGTCATCAAG
GAGGTGCTGCGAAATATGACAATAAAATTGAGGAAAAATACAGAGAAGGA
ATTGAATGGTTTTAAGAATATGGTCTATGACGCAAGAAGGCTGTATAGTT
ATGATCAACAGCATTAATATTTTTTATATGTTTACCTACCTTTCTACAGT
TTGATATTAGCCGAATTTTCTAGGTTTATGTTTTATAAGATTTTGTTAAA
AATATGCCTTGAAAAAATTACAGCGGTTTCCAAGCAAAATAACACAAAGT
AAAAAACTCCGAGTTAGCTTACGAGTAATTATGTTCTTTGCCGTAAATAT
TAATCTTTGATGCTGCGCCAATGATACCACTTCGTTTACATTATTTATAT
TTCTGATTAAATTACTCTAAAAGTCTTTAATTTTTGAAAATTATTGAACT
TTTCCGCTTCTTATTAGAACTCCTTTTTTGTTTTTCTAACTTTCTGTTTT
TAAGTTGAAGTTTAGTGTAGTCAAGTGTTTTCAACTCAAAAATGATGCCA
CGTGACATGTCCTTGTTAATATTTGTGTCGCTGCAAGCGATTTAGAGCAC
ATTCAAGATCGGCCAGGATCGGCCAAGTAATTCTACGGCCAAAATCGGCC
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058057TCONS_00058057Clytia hemisphaericatranscript
TCONS_00058056TCONS_00058056Clytia hemisphaericatranscript
TCONS_00058055TCONS_00058055Clytia hemisphaericatranscript
TCONS_00058054TCONS_00058054Clytia hemisphaericatranscript
TCONS_00058053TCONS_00058053Clytia hemisphaericatranscript
TCONS_00058052TCONS_00058052Clytia hemisphaericatranscript
TCONS_00058051TCONS_00058051Clytia hemisphaericatranscript
TCONS_00058050TCONS_00058050Clytia hemisphaericatranscript
TCONS_00058049TCONS_00058049Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058054-proteinTCONS_00058054-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_304supercontigscaffold_304:262966..272166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43	0.39	0.11	0.04	13.77	12.91	9.59	15.18	5.97	6.01	4.31	4.61	3.1	3.12	1.37	1.66	1.7	2.01	1.64	1.49	1.42	1.17	0.81	1.03	1.92	3.88	0.93	0.53	0.35	0.45