XLOC_035433 (gene) - C. hemisphaerica

Overview
NameXLOC_035433
Unique NameXLOC_035433
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_27:166117..176325-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035433 ID=XLOC_035433|Name=XLOC_035433|organism=Clytia hemisphaerica|type=gene|length=10209bp|location=Sequence derived from alignment at scaffold_27:166117..176325- (Clytia hemisphaerica)
ATTATATATATTTTTGAACTCAAATAATTCAACCTTTTTACCAAATATAA
AACAGAATCAAAAAATGATGAGTTCAACACAAAATTACAGAGCTCTCGTT
GAATTTCATTCAATGAATAAGAACTATGCTCCCCCAATGTACCATCTTCA
ACAAGATTCAATGGAGTTGCCATGCAATTATTTTTGCTCATTGGTAGTCT
GCGATAAAACATTTTCAACAAGTCAAGCTTTCCCTTCACCAGATGCTGCA
GAAACAGAAGCTGCAAAATTAGCTTGTCGAGAGTTTCAACTTTTAGAATC
GCAACCTCCGATCAACCAAAAGAGTTTTGTACAAGATGAGGATTATGACA
AATATTACCAACAACAAAAAGGAAACAATGATTTTTTTCAAGGAAATGGG
TTTCATAACGAACAAAGAGGGTATCACCGTGATAAACCAAGATATGAACC
TTACCAAAATAAACAGATTAGAACTAAATCTTTTGACAACCAAGTAAATC
ACAAACCAAAAAGCAAGATTCAACAACAAAACAAATCTCAATATCAAATT
GATTCCGCAACAAAATCAAAGTCTCAAGTACATCATAAATCACCAAGCCA
ACCTTACCAAAGAAATGATGATTACCAGCAATCAAACCAACCTCACCAGC
CAACACATCAGAAACAAGCACAGCAAAAACCAGAGAAAAAAGTGTATCCT
GATTTACGCCATCGTCTTAAAACCCTTCCTGTTGATTCTTCATTAGCTAT
CTATCATTCAGATCCTATCAAAGTCTCAACCATTGGGGAGGTTTGGAAAT
ACATGCATGGTGATGTCTTGGCAAACGCTTTCAAAACGATCTTAACTATG
GTTGCACAAGAAGAAAAAACTGAGGCTTTGCCACGATGGAGTCATACTCA
AATAGAAGAACGTGTCAACAACCACAATCTCTATGCAGGAGAGTGCACCT
TCAAGAATCAAACTTTCAAATCTATAGGTATGTCTCAAAATATAACTTAT
ACCGGGTCTCCCAGAAAAAAGTTCCGCTCTTTGAAATGAATTTTCTCCAG
TTCTATAAATTTCTAAACAATCAATCCTTTTGCATTGGAAAGAGGAAGGA
TAAAATTAAATTTTGAGGGGTCATTTGTCAAATTTAGTCAACTGGATCAA
AAGTTAAGCCAAAATGAATAAAAAATTCTTTTTTTTGTAATTGCTCAAAA
ACGTTGAAAAGCGACCTATCAAATTGTTATAAAAGAATAATTGCATGGAT
CATGATTTTCATTGTTGAAGCAATAAAAACCTAATGGAAGTATCTTTTTA
TGAAAAACGAAGTAAGATTTTAAGTGAAACAAAGAAATTTATCTGAAAAA
CTGAAAAATTTGATAATTCCAACCGATATGGCCCTTAAGCCAAAAATTCA
AGCTGAATTCCATAGAAAATAATTTGAAATGACCTAAATGAAATTTTTTA
GTCCTTTAGAGAATTATTTCAAGCATTTTTTGTTTTCATGTCCACTTTAA
ACTCTTTATTCCTGCAAAAAAGTAATAATTAGGTTATAAAATTTNNNNNN
NAATTTGATAGGTCGATTTTCAACGTTTTTGAGCCTTTTCAAAATGTGAA
ATTTTTATTCATTTCAGCATAATTTTTGATCTAGTTGACCAAATTTGATA
AATGCCCCTCAAAATTTAAGTTTATCTTTCCTCTTGCAAAAGGATTGATC
TTTTAAAAATTCATAGAACTCCAGAAAACTTCAAAGAGCAGAACTTTTTT
ATGGGACACCCGGTACCTATATATTTATATCTTAGTATGTCTTGTCTGTC
CTTTTCTTTAAATTTACTTTTCTTTCTTAACATTGTTACTATACATAGCT
ATTTTATATAACCTCGAATCTAGAACAACTGAATAAAAAAAATAAGAAAT
TTTCACTTAGCAAAATTCACTAGCGAGAGGAAAATTTAATAATGTACAGT
AATTTTACTGACAAATTATAATTGAAAGTCTTTTTAACAACTAAATTAAA
TTTACTTTTCCCTACTCTTTAGCACCAATGATGAGCAAAAAACAAGCTGA
GTTGAGTGCAACAGAAGATTGCCTACGTAAATTGGGTTACTTTCAAGAAT
TGCCTACATCTGAGTATACAATCCAGCCATACAAGGGTGGGCGTGTGATG
TACAGCAACCAAAAACAGATCGGTCCACTGGCAGTTTTGAACAATATCAA
CATAATGTTTTGTTTTGCCAACAGTGGGTCAATTAGAACAAAGAAAATCA
AAGGTGAAATAAATCTTGGTGAAAGTGTTGTTATGCAAAAACCTAGACGA
GTGCCACCTACCCCTTTTCATCTGATTTACCTAAATTAACACCCAACTGT
AAGGTTCCATCTTAGATTTCTTTAAGGTGATTCTCACGAGTTCCTGAAAA
TTATTTTTTGTCACTCTTCCGGCCAAGGGAAAATATCTAAAAGTCCAGGC
CATTTTTTATGCCCTTTTAGCGTCCGGTGACCGGACGCTGCTCCTCCGGA
AATCACTATAATTTTGGTAAAAACAGCCTTTTTAGTGGAAAAACACTAGA
AAAAGTGCCCTTTTCGGCCACCAACGGACGCTGCCCTGCCTTTCTAAAAT
ATGGCCTGAAGTCTAGAAACTAAAATTTTCAAAAAGTTGTTCTCAAAATA
ATTCCAAACCTCTGAGATGGTTTGAGATGTTTGGTATGTAGGTTTCTTTT
ATTTTCCTGAGCAGTACTTGAGAATGTTTTTGCCTAACTATTTTCCAAAG
TTGAGATTGATCAAGTTCAAGTTTTGAGTTTTAATAAGCAAACAAATAGA
TTTTCAACGTAAGAACCATGAAGAATCCATTTTAAGAATTTCAAACTGTG
AAAATAACTAGACAAAAAATGTTTGGAGCTTTCACTCAGGACCACATACA
AAGGGTTTCTACAGGACCAATATCTCAAACTATCTTTATTATCCCTAAGA
GGTTTCAGAGTTTTTGGATTACGTTGAGAATAACTTTTGGAAAAATTTAA
TTTCTGGACTTATTTTTAATTTTGGCGGAAGAGTGACAAAAAATAAATTT
CAAGAATTTTATGGAAACCTTCAAATAAAGAAATCTAAAGTGGGACCTTC
AAAAACTCAACAATTTTACCACCCTTTATCATCAACAACCTTTAGATTCA
TCTGGTGAATTCAAGTACCAAGCTTTCTACACACTGGATGATCAGCTTTT
TGTATCACAACCAACTCATTCTGGTTATTATGAAGCAAAATCTCAAGTGT
TTAGGATGGTATTGAAACGATACAATATCACGCTTGATTCACAATTGAAG
TCTCAATATGTTTTTGCTGGACTTAACAGAGACTTTTTTCAAGCCAAATA
CTGGCAGAGGTAAAAAAACTTTTTAGTACACTATTGCCGACTTGGAATGT
TTGCAATGTTTTTTTCCCCGCATTCATTCTTCTTTAACTGATTGTTCGTT
TGGTAAATCCTCAGTCATCATCATCACCAATTTCAAAGAAGAAATTATAC
TTGCTTGCTACTGCATTATATCTTTTACTGTTTTCCTTTAGAAATTGTCC
AAATTCTAGAACGCCAAGCCAGAACAAAGGTTGGCTTCATAGAAGCTATA
TAGATCCAGCATTTGCATATGATGGTCAACAAGTGGATATCAAAGCTCTC
AAAGATGCGATGGGTGCAATATTTGTCCTTGGGTACGTTTTTAAAGCAAA
ATCTATTTTTCAGGCTGGGAGAACAATAACGAGACTTGCAATTAGTATTG
CGCTATTTTGCCCTATTCTACATGTAAATAGAAGTAATTTGGAATTTATT
TTATTTTATGATGACAAACATCAATTACGAAAAACTTTGAAAGTTGAAAT
CTAGCAACATTTAATAATATTATTAAGATGAGACTAGCGTCATAGTAGGA
CGGGTCCCAAAATGATACATGCCATCCCAATGTGATACATTACATGTCAT
CCCAATGATAGCCGGTCAGGAGTTGTGATAACAGAGGTTATAGGATTATG
AGTAAAGTGTTAGTGGGTCGAATTTTGTCAAAACAAACTGAGTGTAAAAG
TATTAAATTTCCGTGAATTCCTACCTAGGCTTTGATGTCAAAGTTGTCGT
TCTCATAATTTTGAACCCTCTTCGGAGATGAATATTGTTTTGAAGCATGC
TTTTATTAGTGGAAGTTTTAAGAAAAAATATATGTAAGCATATTCATGAT
CTTTCTAATTCAGTGCCAAGACCGAAGTGAATTCACATGAATATTTTATC
AAACAACCACCTGCACTTCAATGTCAACCTCTCCAAGAGATTCAAGATTT
GATGGTCTGCCATGTTGGNTTTTATTTTGCCCTATTTTACATGTAAATAA
AAGTAATTTTGAATTTATTTTATTTTATGATGACAAACATTGAAAGTTGA
AATCTAGCAACATTTAATAATATTATTAAGATGAGACTAGCGTCATAGTA
GGACGGGTCCCAAAATGATACATGCCATCCGAATGTGATACATTACATGT
CATCCCAATAATAGCCGGTCAGGAGTTGTGATAACAGAGGTTATAGGATT
ATGAGTAAAGTGTTAGTGGGTCGAATTTTGTCAAAACAAACTGAGTGTAA
AAGTATTAAATTTGCGTGAATTCCTACCTAGGCTTTGATGTCAAAGTTGT
CGTTCTCATAATTTTGAACCCTCTTCGGATATGAATATTGTTTTGAAGCA
TGCTTTGGAAGTTTTAAGAAAAAATATATGTAAGCATATTCATGATCTTT
CTAATTCAGTGCCAAAACCGAAGTGAATTCACATGAATATTTTATCAAAC
AACCACCTGCACTTCAATGTCAACCTCTCCAAGAGATTCAAGATTTGATG
GTCTGCCATGTTGGAAGCAATTCTGATTTCTTGCCAAATGCTGCACTCCT
TGGCAATAAAGATTTCTCCGTCCCCTTGTATGTGCAAGATGAAAAACTGT
TTTGTAAGAAGCGAGGTTGTGAAGTAAAACTTTTACCAGGTATAATGATT
TTCTGTATTTTACAAAATTACAAATTTGTTCTGAAATACTTTGTTTGAAA
TTGGAATTATGTTCTATTCACAATTTGCTTCACAGTACTTTTTAAGAACA
TGAAACTGAAAGTACTGTGAAGCAAAATTGTGTATTTATTTTGTGGAAAT
TGTATCATGCTCCTTCACCTTGTAGTGCACTCTCTTAGGTTCAGCCCCCC
CTTATTTTTTTTTTTTGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGCTAAGAAA
TATTTTGGCCTTTAAAGAGCCTGGGGGCTAAAATTACCAAAATATTTGGG
GGGACCAAGATTGTTGGGGGAGCCTAGATGATCTAAGTGAGACTGTTCAG
CTGTTCAGCTAAATTCAAAAGATATCTTATCTTACTATTAAATCAAATAT
AAAAAGCAAAAGACTTGTAAACATAAATATTAAAACAATTAAAATTTAGT
TTTCATTTATCAGTACTCGCATATATTTTTTATTGACTTCTCTCTACGGG
GGCGGGAGAACAATGTTTTTGTTTTTGTTTATCTTGGGACCTGAAGTGTT
AGGGGACCTTTGGGGGGAGCTAAATTGATTTGGGGGACCTTACTTTGTTG
GGGGGAGCTAGAAACCTGGCTGAAGCTATGACTCTTGAAGCATCGCTTAA
ACTTTAATACATAATTATGCTCTATAATTCTATTCATGATATGCACCACT
GGAGAGCCTTCTGAGAACTTTAAAAAATTTCGACCCAATACGTCACTTAA
ACAATAGAAAAAGTGAGTAAAAGAAAAAGCAGAAAAGTTACATAATTTCG
TGTAGTCATTCGTGCATATCATCATGACTACATATTAAAAATACTTTCAG
TTAAAAGTTAAGAACATTCGAAAACTTGAATATTTGAATATTCTTATAAG
GAGAACGTTTATGCTCAAGGAAAATTGTTACATTCTCTAAATTAAAATCA
ATAAATATTTTTTTATACATTCGACTTCTACCTTCATTTAAGTCATAATG
GGCATAATGTTTACTTTTTTATAATCATATAAACAATAAGGCAAAATTCC
TGTACTACTACATTTCCCAGCATTGTGTTACAGGTCATATATCAGACATA
GTTCAAACCCACACCCCTTCTTAAGGGGGGGGGGGGGATATGTACCATCC
GGAAAAATGGGGGGGGTCAGAAATTTTCATGAAAAAAGGGGTAGGGGCTT
ATATATATATTGTAGATTATTTTCAAGCACTGTTATGAAATATGGTCTTC
ATGAATTGAAAGGGAGTTTTCTGTTAGAGTAGTCTGAGTCAAAAAGAAGA
AAGAAGTTTATTATTTTACTTTATCTCTAAAGATATTTCACATGTATTTG
TTAGCTATTTTTGTCCAAAATCCTTGGGGATAGGCATTTTTAAAGGTTGG
GGGATGCCAAGAAGGGGGAATCAGACCCCTTTCTGCACAATGTATCAGGT
TTGGAAAGCGAATACATAGTCTCTCCAACGAATAATGTGCAATGATTTGT
TCTTTCCAAATCACATCTAACCAACCCTCTTTATAAATGAAAATTTATTT
TCCAACTTTTTACAGGTCACAACATAATCAGGTTTGGAAAGCGAATACAT
AGTCTCTCCAACAAATGATGTGTATTTGAAAGCAATATCATGCAATGATT
TGTTCTTTCCAAATCACATCTAACCAACTTTCTTTATAAATGAGAATTCC
TATTCCAACTTTTTACAGGTCACAACATATCAGGTTTGAAAAGAAGCAAA
TACATAGTCTCCCCAACAAATGATGCGTATTTGAAAGCAATATCATGCAA
TGATTTTTTCTTTCCAAATCACATCTAACCAACCCTCTTTATAAATAAAA
ATTTATTTTCCAACTTTTTACAGGTCACAACATATCAGGTTTGGAAAGCG
AATACATAGTCTCTCCAACAAATGATGTGTATTTGAAAGCAATATCATGC
AATGATTTGTTCTTTCCAAATCACATTCAACCTGTTGTCAGATCATGTTG
TGTGATTTTAATCATGCATGATCCACTAGCTGGGTAAGCAAAAATCGTTG
AAAAATAATGCTCAATTTTGTTTGTCTGCATTATTTTTCATGATTTTTCG
TTACTTATAATTCGCACTGACCTTTATATATCCCTGGACTAAGCTATATC
CGCCATCTTTGATCGAAGTTTTTTTGAAAGTTGGTACCTGAAAAGAAGCC
ATTGTAGTGTTTGAACTTTTGTCTAACGACAAACGGCGCTACATGATTTA
TGTACACGCGAAACTAGACCTAGCGCTCTCTCCGCGTGTACCAATTTCAA
AAAAAACTCCGATCATACTAGCTTTGAGTAACTTGATCCAGGGATATATA
AAGGTCAGTGATTATTCGTTGTTTTTTGTTTTTGAAATTACAGTTGACTT
GCTCCCCTATTTGATTAAAGTTCATTTGCCCTTAAAAATCGAATAAGAGA
GTGTCAACTGTATACTATTGTTGATCATCGCTAATTCAAACGTAAAAACA
AATTCTAATTTCTTTCGAATTACAAAGAGATTCGAATTTTACGTGGATGT
TAAATCTATATTGAATAAAGAAAGTGACTGGTTTATTTCGAATTATAGAA
ATATTCAAATGAAATAAGTTCGCCGTAGCTAAAGCGCACTATATTCAAAA
TTATATCATTTTTTTATGTGGAAAACCTACAAAAGGACGAACTATCCTTA
CTATGAGATAAAAAATATATATTCGTATTTTTAGTTTTCACCTTTATTAC
GAATGAAATACGCGCAAAACACTTTTCGATATTGTTGCGTAATTTTGCGA
GACTTTTATTTTCGTACACGTTTTCTGCGCGATAATAAAGGGCGCGCGAA
AATTATGGGGTTAAGGAGTCGCTCTAATTCTTCACATACCGAATTCAATT
AAAAAGCTTCAAAACAATTTTGTAAAAATAATCCCGCAGTTTGCTTGTAA
AATAGCTCTCTGTCTCTAAATTTTACATTCAAACAGTTTTTTTGAAATGC
TGAAAACTTCATTCAAATCGATATATTTAGCTGGTGAACTTCAAGGTCTT
ATTAAAAGAAAAATGTTAAAATAATACTGGGAGTTTGACTTAATCTTCCA
ATTTAGACTTTTTTTTGGCGTCCCAATACACAGGTTGCAAAATTAAAGTC
TGAAAACAAATCATGCTTTTACTGTAAGTTGTAAAACAAGTAACATAGGG
ATAAAATCACGTGAACTCTTTCGAGTAATCACATGTTTTGTCTACATTGA
TATAATTTTGCAACCCGATTATTCTTTGAATACGGGGGGGGGTTGCTTTA
AAAGAATATTTGAGTAAACGTTATTTGGCAAATAAATTTTTCAATACCTT
TTTCTTATACAACTTTCAGTGATCTTCCCTACGTGTTGTTCATGCGCTCG
GCCGCCAACACTGGATTTGCATCCAAGACACAATACCTCTCCGACTATTT
GACTCAACTCATCAAAGGGAATTCACAAGCAGCACTAGACATCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGGGGGGGGGGTTGATAGCTTAAAAAGAATATTTAAGTA
AACGTTATTTGGCAAATAAATTTTTCAATACCTCTTTTTTATACAACTTT
CAGTGATCTTCCCTACGTGTTGTTCATGCGCTCGGCCGCCAACACTGGAT
TTGCATCCAAGACACAATACCTCTCCGACTATTTGACTCAACTCATCAAA
GGGAATTCACAAGCAGCACTAGACATCACCAGTTTAACGGAGAACATTGG
ATTGTGGACAGATCCTGAATTGGAGTGTCTTTCTGTCATGTCTATGGACT
CGATGTTCGAACTTTTTTCTAATTTCGGACGATATGATTCCCGTTGGAAT
GAAGTATTCATGCAGCCTCCTACTGAAGACCTTCAAAGCCTCATGGTAAG
AGTTACTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056259TCONS_00056259Clytia hemisphaericatranscript
TCONS_00056258TCONS_00056258Clytia hemisphaericatranscript
TCONS_00056257TCONS_00056257Clytia hemisphaericatranscript
TCONS_00056256TCONS_00056256Clytia hemisphaericatranscript
TCONS_00056255TCONS_00056255Clytia hemisphaericatranscript
TCONS_00056254TCONS_00056254Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056254-proteinTCONS_00056254-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:166117..176325 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.34	5.85	8.14	8.66	21.31	17.72	24.64	26.78	15.01	15.2	11.36	9.49	10.84	8.19	10.13	12.38	19.25	16.72	6.17	6.73	10.8	12.01	11.33	12.06	16.26	19.64	6.27	4.16	9.1	10.46