XLOC_034771 (gene) - C. hemisphaerica

Overview
NameXLOC_034771
Unique NameXLOC_034771
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:205157..208962-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034771 ID=XLOC_034771|Name=XLOC_034771|organism=Clytia hemisphaerica|type=gene|length=3806bp|location=Sequence derived from alignment at scaffold_251:205157..208962- (Clytia hemisphaerica)
CCGAGTCTTTCTCCATATATCAGTCCTTCTTCATCAAAGGCTTACACTTC
TTCACCCTCCATACACCCTTCTTCATCTCCCATCCAACCATCACCCTTCC
CCTCTACTACTTCATCTCAAGAAGTCCTCAACGAATCAAGCTCAACTGAC
CATTTTGATGTCTTATCATCGCATTATATGATGTCTTCAACAACATTGAG
CCCAGGTAATATAAACGATTGCAGAAAAGATTACACGTTTTTTTTTTTTT
AACATGAGGCTCAGAATGCCTAAAAACTAAGAAACGTCTAAGAAACATGC
TGAGGCTGAGAATGAGAAAATAGCATTTTTTAATTCGTTTTTTTTTTAAG
AACTTTCCAATCAAGGCTCCAGAAATATACATACATAACAGTTACAAACA
CTTGAGAAAGTCAGAAAATTAATATAGTAGATAGGAAAGTACCGTAGATT
AGTCAATTAGACTATTATATTATCGACATGCGTCCTTTAAGCTTGACAAA
GTTTAGAAACATGTAAGAAACATTTAAGGCTAAAAAGGCCGATTTCTTAA
GAAACATTGAGGCTGCTTGGTAGAACTAGTTTCTTAAAAAAAAAAACGTG
TATGCAAAAATTTTGTTGAAAAGATTTACACGTTCTTTTATAAGAAAGAA
CTATGGAAGAACATAATGCCTTGATCCCTGAAATCGAATTAAAAGCTCAT
TAAGGCTTTATAGGCTCTAAAACACCCAATTTATTTAGGCGATTGTACTC
CGCTGGGTGGGTATATAAGTTTTAGCAACTTGGTCTAAAGTTTGAAAATT
TTGGTTAAAGTTTATGGAAATGGTTTCTCTAAGGGTGGCAAAAACGTCAA
AAATTTGACAATATTTTAGAAATTCAGACTCTCCTAAGGGTCGATTTTCG
AAATTTGGCTAGGACATGGTGATATTAAAATACACCCTAAAAAATTTTAT
CTTATTAATTTTTTCAAGTCATAATTTCAGGGTCAAACGCCTAAAAGTTT
CACCATGATGTAAAAAGGTCCCTGAAAATTTTTGAAAAAAATCTTCTGAA
ATAGATTGGAAAAGCTAGTTTTCATTTTGAATAATTAACCAAGAGAAAAC
AACTTTGCGTTTCAATTTTTGAGTTTCTATCGTTCGAAGAGTATCTAATG
CGCTTTGTTTTTCCCTTTAGATGGTACATCTGAATTTTCATTAAGAATAA
AAGTGACAAAGCCAGGTGATGACAAAGAAATGCAAATGGTGCCAATTAAC
GAACCATTGGAATTCCAATTAGATATTATAGATGCTCCAAATACGGTCAA
AACTTCTCCACAAAATTGTTATGCAACCAGAGCTGATGGTTCTGGAAGAT
ATAATTTGATTACAGACAGGTTAGGCATTTCAAAAAGGGTATTTCAAATG
AGCAATCGTTCGTAATTATTCCAAAGAACTGATAGTATATATACAGGGTG
TCCCTAATTAAAGTATCGAGTCGAAACACAACTATGAGTAGAAAGTTTTA
TGTGCGTGTTCACAAAATTGTATTTTAAGCTCTCCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGATGGAGAACGTTCTTATATTTTAGC
GATAACACACACAAACTTTTCTACTCAATCGCATGTTCAAACTCGATACT
TTAATTAGGGACACCCTGTAATGTCTCATCCCCAAAACAGGGCAACAAAA
ACATTTTATACCTTAAATCCTTCACCTTATAAACTAGATTTTTCATGGAT
TAAGTAAAATGTTTTAATCAGTAGAACAAAAATAGAACACAGATTTTCAT
GTTTTGATTGATTCAGAAATCTCGAGTGAGTAATTTTTTTTTCCCATGAT
GTGCCCTGTGCTGTGAATTTCACAATTCCCTCTCCAAAGAATAAAAAAGA
AATCTCTCTTGAAAACATAATATTATTACTGTTTTTTTCTTCCTACGAGT
CATCTTGTTCAAAGATTTAGCCACCCTAACCCTTTCCGTGCCCAAGGGGA
GAAAATGACAAAAGAATTGACGAAAATTTTAGAGGCGATGCAGTTGTTAC
GACGGGAGAAAATGAAAACAGTATTTTGAGCAGTCGATGGCATGTATATT
TGTCATAACCAGTTGTTGGCCACCTGGCCCAATTTCAAATATACTTGACA
TGGACCAATCAAAAAACTTCCGCAATGTCAAATATATGCCATCGGCTGCT
CAAAATGTTTTTGCGATGTCAAATGTACTGGATTTGGGTACGGAGAGGAC
TAAGGTCGGTTCTCAGAGGACCGGGCTTGTACCCCGATCAGCTCTCGGAA
CTCAGATCGACTTTACGTTATATTTTTTTTCAGATGTGAGGATGACGAGA
CAACTGCTATCACCTCCTCAAAAACTGCAATCCATCGGTTCTCATGGGAA
ATGTTAGCTTTCAGATATTTTGGAAACTCTAATGCAGTCATCATCGTATG
TGAAGTTTTGATTTGCAAAAATGAAGATTTTGCCGATTTAAGCGGAGAAT
GCAAAAGATGTGGTCAGACTTCAAAAAGAAAAAAAAGAGCTGTCAGTGAT
TCAATGGTTCTTGAGAAAACAACAATCTCCAGTCAACCTATTTTTATCAT
CAACCTTCCAGACAAGCCAGGTCAGAACTTTTGGTTTAGGTCCTTGTCAT
ACTGAATGATATGTCTCCCAATTTGGAGTCCAAGCTCTGGAGCTTTCTAG
TAAAAGAAATGTCTTCGACTGTCAACCTGGCAACAGAATCTACTCCAGCT
GCTTCCCGTAATGGTGTGATTCGGGGATTCTTTACGATTGATGAGCCCTT
GATATGTAAATATGATTAATGTAGATTTTCACTTATCGCAAATCTTACAC
AAATTTCATGACTGGCTGATATTTGCTAGATCCTCCTCTTGGCGGTATAA
AGCGGGATGAAACTTTGAGCTTTTAATATTTTAGGACAATTACCAGCACA
AAAGGATGAAGGATTTTTGAGAACACCAGTAGGAATTTCAGTGATTGCTG
TTTTAGGAGTAATCATTCTCGCCCTGAGCGCTTTCATTGTGAAGAAAAAG
ATGGTTGCTACCTCCTCACATTTGATGAAGAAAACTTTAGAAGTTGAAGG
AAATGTTGAAAAAGGAGTTGACAACATGGCCATGGAAGTGATCAGAAACT
GATCATGAATAACGGTTGAGGATTCATGTCTCATAGAAAAAATCCTCTTA
TTAATTAAGAAACGTATTAGCATTTAATCTACTGCACTTATATTTAGGTT
TTTAACCCTTAGACTCCATGAGACGCGTTTTCGCGTCCTGAAACAGCCAA
AATACCAAGTCCCAAAGGTTGGGTCCCAGGTCCCTAGGACTTGATTTAAA
GGGGCATAAACCGAATGCTTTTTGAAAGAGTACAAAATTACCATTCCAAT
GGTACCAAAACGAGTGTCTAAATCAAAAGCTACAAGCTTTTACGCCATTT
TGAATTTTGAAGTTTTAAAAAAAAAATCATTGAAATTTTTCAACTTTTTC
AAAACTACTGCGCGCTCAAAGGGTTAACTAAATTTTTTAAAATTTTTTTC
GAAGACTCCAAACTGCTCAAAATGACTGAAAATGACAAATAGGAGTGATT
TGAAGTTGTTTTGACCATAAAAAATTTTTATCAGGGGTCTCATTAACCCT
TAGACN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055212TCONS_00055212Clytia hemisphaericatranscript
TCONS_00055211TCONS_00055211Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055211-proteinTCONS_00055211-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:205157..208962 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.62	2.56	5.5	6.96	2.3	1.37	2.19	1.93	2.31	1.86	3.83	4	5.31	3.79	7.6	9.44	5.42	5.27	9.59	9.61	5.33	5.85	6.12	7.77	1.57	1.92	4.55	3.39	1.79	1.51