XLOC_034756 (gene) - C. hemisphaerica

Overview
NameXLOC_034756
Unique NameXLOC_034756
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:581490..592051+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034756 ID=XLOC_034756|Name=XLOC_034756|organism=Clytia hemisphaerica|type=gene|length=10562bp|location=Sequence derived from alignment at scaffold_251:581490..592051+ (Clytia hemisphaerica)
tttcagtgataaaatatttttcaaaacaaatataaCTTATTTATATTGAA AGAAGTGTAAATCATGGCAGTCCGTGCACGGTATGAAAACAGTAATGAAA TTGGTGTTTATTCCAAACTGACAAACACATATTGTATGGTTGGGGTTGGC GCATCACAGAATTTCTACAGGTGAGTAGTGTTTTTCACCTGTATTTTATA TCTTTTAATGTGGGAACTAATGTTTGCGAAAACCTATTTCATGAGACtag tttttttgttcattcagGTATAGCTCAAAGATAGTTAAAAATTTCTCAGT ATCCAATTTTGATATATGCAAAGTTTAAATgcctaaagtctgtccagata taattggcagtggaaacaagaatgcctgtaacttttgatagtcaaatata attatggaaattttttttgcttgttttagagaaNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt tgccttgaaatttaacaaacttcttaacctaaggttgaactaccactggt gtaaaaatgaatgtaatagcataagtagaaaaaaagctcaatttttacac tcgcaaattaaaccgctaaaaatcgcgaatttttcaaccaaaaatacatt caaatatagcgcttttgattctctaaaacaagcaaaaaaaatttccataa ttatatttgactaccaaaagttacaggcattcttgtttccactgccaatt atatctggacagactttagttattCTGTTTGTTTGaacattaaaatttaa aaagtttcatctttcattcttaaaatttaaaaagtttcatcTTTCATTCT ATAGTGTTTTTGAAGGGGAATTGGATGATGTCATTCCAGTCTTTCAAGCT TCTGTATCAGACTCTGCTATCGTAGGGCGCCTGACAGCTGGTTAGTGATT TACTAacttatttttttagttttctgcATACAGTATATTATTCACGTTTG GATAAAGGAACTTCCATGTACTGAAGATTTTGAACAAAATACTTTGATCA ACCAGGGACGTGGGTGCTACcacagggtactaacccatagggtaaCCCTG AATTTCAGCAGGAATATTTGTCTTATATAATCACCACCTCTTTTTTCAAT ACCCGGTACTAGCTTTTTTGAGAACAAAAAGGATTCATCTTTAGTGCCAG GTAATCTCTACTTTTGGGACCCCCGCAAATTTTTTTCGTTCGCGGACGCA AACCTGATTTAGCGGTCAAAGACCTAAATTAACGGTCaaagacctgaatt aacggtcaaagacctgaattaacggtcaaagacctgaattaacggtCAAA GACCTGAATTACTGGTCAaagacctgatttagcggccAAAGACCTTAatc aacggccgaagacctgatttagcggccgAAGATCTGAATTAACGGTCAAA GACCTGAATCAACGGCTGAAAACCTGATTTAACGAccgaagacctgattt agcgATTCACCGGCCGAATACCTGATAGATAAGTTAGGGTCAGTTAAACT AGCTTGAACCATTCGGCAAGGCATCAGGTGCTATGGTCCAGTGGTTAGTG CAGTGGTATTGGAGACGAAAGATGAGTAGTTCGAGACCAGTTATTGGcat taattttcattatttttagtttaaaatcttttaacttaatttgttttcaa tactATTTCCCATTGaaacgtcataaaaaaatcttgaatgaatttataaa aaagctttataaCAAATTTCCACAATTCATTTTCTCCGGGTCTTTGgccg ttaaaaaaaaattccaccacTGCATCAAGTCTTCGGTTTTCAATTCATGT CTTcggccgctaaatcaggtctgcggccgctaaatcaggtctgcgACCGC TAATTCAGGTCTGCGGCCGCTAATTCACGTCTGCGTCTGCtgacagaaaa aaaatctgcggGACCCCCATCCCCTATTAAGAAGCCGGTTATCAAGAATA ATAAGGGTACAGTACATAATACCTATTAATATTTTGAGACCCAAATTAGA CACCACTTCCTGGCTATGGGTAAGTACCCAGCAGCTTTGTACCCTTTATC GACTGGTGATTCCAGGATTTAGATCGGCAATTCATATTCCTTGATTAGGT AATTCAAGATTTTCTACCTtattgaaaacttaaaaaatattcttcttgat ttttttgcaggCAATCGTCATGGTCTCCTTGTACCAAGTACTACAACAGA TCAAGTATGAaacttttatctttatttttcaacaacTTCTACGTTTATTC TGCGTGCTCTAAGTTCTCATTAGAGAcaaatggtttgttttaaaTATCTA TACTAACTCTAGTTAATaataagggctacatacactacacaatatattgc tgaatgcgggcaatatattgaaaaggtgtccgcaatatattgtcagctag atttgcaatattccaacaatatagggggattgtttacaaaatgaaaattc ctttttataataacccgttacggtccgaaaactaaattgtcgaatattgc tcaccaatatattgtgtacatgtttttttttataagcaagtgtatgcccc ttggtcaggctcgtgtatgcttaagttctcaaagtatccaggcatagttt atgcttattatatgcttNNNNNNNNNNNNNNNNagtttatgcttattata tgcttaagaatcatgcttatgattcaccccaagccaagtttttaatgaaa tttcagaaattttgtaaaaatttgttcagattttaggagcagtggaatgt agctaaccgtggaatgtcttatttttacttgacctctaccaaaccttttt aaacagataaaaacgaccacttgaaaaatatttcaggctgacataaTATG CTCATgtgaattctgcaaatctgagccttcatatgcttattagcgttttg cttataaaaaaaacatgtagtctaagtagccctatACTAATTGCAGTGTC AAGATGAACTACAATAAATTTTCATGCAATTCTCTTTAAACTGCATTCAG CCCAACTTTCAACTGTAATCGACAGACTGATACTTTCCATTTTTAAGGAG TTAAAATGGACTCCACTTCTTTCAGATATCTTGCCATTATGacttatttt cagatttttgataACTTCGAAAAACCCCTGTAAACGAACATTGTATCGTA GAACGCGTATTTTACGGTCACTTTTTTGACCTACcaggaggtcctatgaa ttcaCCTTTATTCGGTTCGTTCGTTCGTCACCAGCGACAATTTccctgaa aaagatttttagggattttctcgagctctcattagtttttctgacgtttt gtttattttaaatttaatgttttctgtTGATCagccaggtaggtccatca aagtattactttttttctttttcaggaaCTTCAACATATTCGAAACTCTC TACCTGACGGTGTGAAACTACAACGCGTGGAGGAACGTCTTTCAGCGTTG GGGAATGTTGTTGCATGTAATGACTACGTCGCACTCGTTCATCCCGACCT CGACAGGGTAAGGATCAAATTCGTATGCTAGAAAAAATGCGTGTTTCTGC TGTTATAGCTATATAGGAACAGATGAAGTTGagtttttcgaagtttttaC TCAATTTTATTGATATATTCTTATTGTTTTTTGATGAATatgttttgtta aaaaaactttaaattattGCTTTTTGTACAGGACACTGAAGAGAATTTAg gtttcgcgaaaataagtacccgcaaaattttgtaacacgcgaaatttaat accattAAGGTATTAGGCACTTGAGAGTAACATTTTAAATCATCCATCGG CTATTGTTTTTAAACAGGAAACTGAAGAGATTTTAGCAGACACACTAAAA GTAGAAGTATTCCGTCAAACGATAGCAGAAAATTCACTGGTTGGAACTTA TTGTAGTATTAGCAATCAAGGTGGCCTGGTAGGTTGAATATATGTCGTGT TTTTGCAAGCGAATTTTCAAAGATGAATACAGAAACCAATTGTTTCATCT TCTCCACAactcatagtgtgcagaggggtctgaacccccccattaatatt tcatccccccctataaaggtatcccccctatttttaaaattttttgatcc cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccctataaagcctt ccttgaaaaTTCGGatcccccccttaaaaaaggggggggttcATACTATG CAACTGTTTCATGGTTTCTCCCAAGTTTCCTAAACACCCCAAGTTTCTGA GACTAAATTAGTTTATTGTTCTACGGGTCTGATGGACCTAAAATCAAAac ccaaaatcgaaaaaataataatattgactTGACAAAGCTGAAGGGGAGTG ACTTTATAAGTTTATCTCCAGATATTGTTTCTAACTGAACAAGCTGAAAA AGTGTAAATTCATTCCATAACTTAGATCGCTtagatgaatttaaaacatC ACAAGGGAAATGACACGAAAGTGGCTCATCGATAAAGAGTGAAAAGTCTA CTGCTTCAAAACGTCACAACTTTTTTAGATCTTATGACCTTCCGAcccta aatttgaaaaaattatttttaccaaCCGAccaacaatatttttctgaaag tctTCCCGTAGAACGATGAATTAAATTTGTCTCGCCTAAACATACCAAAA CTACTTTGAGCTATAAACTAGGAAGAACTTTAGAGAAAAACCAGCATAAA CgaaattgtttcaaaatacTTCCATTTTAAAGAACCGTAACTAATTGACT TCCAGCTGATTAGTGGTCATTCTTAACCTCCACCCATccacggaaatacc ccggttttagccaggagtggcaaatttaaactagacaaaagttgtataaa atttgtcactactggcaaaaaccggggtctttccgtagaaagcattacgt catgaatatcataaatACTATCCGTTACTTTAGCAGTTGTTTGTTTTAAA ATGCTCACTAAAACCCTTCTCATTTCTATACACTTCAGGTACATCCAAAA ACGTCCATCGAAAATCAAGATGAAATATCTTCATTATTACAAATTCCTTT AgttgtgagttttttttttgttttttttttttgctttaattgCTACTATT TCACTAGTTTCGCTGGAAAGATCgctgtctgtacacaaacccagtatcta cggcttatttcaaaattcattgccgtagagggtctgttgtcattgtcttt tctcatttgagatttttcaaaccgaccgctgcgatggagtgttggtgaga gaggggagacgatgagagaaacgttgctatttataaatcatacttcatcg cagaggtctccgtacgggaattctTTTAttaaacagacaatgcgcacaga gtgtactacaaagcgataaacgtgatatacactctggtacagagtagaaA GATCGTCGACTCGTTTAATTTTAATTCCAttggtaaaaaataaataattt ttgtagACCAAtacaatagatcttatcggagtttttgattttttttttta aagcgatgcattgtgggattgtttcgggtgTATTACAATAATAGAGTTCC CTCGAAGAATTCCtgagagatttctattgtaatacccccgaaacaatccc acaatgcatcgctttaaaaaaaaatcaaaaaccgataagatctattaaaA AAGGTCAGTACAATTAGGTTCATTTTCatttaacaatattttgaatgttC CTTCAACCTTTTTTCTTCATAGGCGGGTACAGTGAACCGAGGTAGTGAGG TGATCGGAGCCGGTATGATAGTCAACGATTGGTGTTCGTTCTGTGGTTTG GATACAACTAGTACTGAGTTATCTGTCATCGAAAGTATCTTCAAGTTAGG CGATGCTCAACAATCGGCCATCACAACAACTATGAGAGCTGCCCTTATTG AGTCGtaagtattattattattgtatgATTTTCCTAAACCCTTACAGAGC ATTCTATGGGAAGTGTCAACCTCGAGGGAAACCAGTAGGTAAATTAAGAC CTAGGGTCAGGTAAATTTTATTTGGTAATTGAACTTAAAAAGAACACGTT GGACTTTGACTTTCTTCCCGGAAGATAAGTCTCAATTTGTCCAAAGCATT CATAGGAAAACCTATGTATGACGTTATGCTTTCTAAAGGAAACACCTCAC ACGTAAATAGTAGCAAAAAACAGGCGGCCGAAAAAAACACGAGAAAAAAA TCCGGGGGGACTAAAAGGTAGAGGAAATTAGAGgaattgttttcaatttt tcagtaGGAGGCCTACAAGGACACTATGGTCAAATTTCCCAGTCTCGTAA TAGTTTCGAGATAACGTAACGGGTAGCATAAGAAGTAACTAAGGAGctta ttattttatttcattatatcattttctttattttagcaTGACGTAAACGG CGTGGACGAACAATGCGAAGGTTCGGTTGGGANTTCTTTTAttaaacaga caatgcgcacagagtgtactacaaagcgataaacgtgagatacactctgg tacagagtagaaAGATCGTCGACTCGTTTAATTTTAATTCCAttggtaaa aaataaataatttttgtagACCAAtacaatagatcttatcggagtttttg atttttttttttaaagcgatgcattgtgggattgtttcgggtgTATTACA ATAATAGAGTTCCCTCGAAGAATTCCtgagagatttctattgtaataccc ccgaaacaatcccacaatgcatcgctttaaaaaaaaatcaaaaaccgata agatctattaaaAAAGGTCAGTACAATTAGGTTCATTTTCatttaacaat attttgaatgttCCTTCAACCTTTTTTCTTCATAGGCGGGTACAGTGAAC CGAGGTAGTGAGGTGATCGGAGCCGGTATGATAGTCAACGATTGGTGTTC GTTCTGTGGTTTGGATACAACTAGTACTGAGTTATCTGTCATCGAAAGTA TCTTCAAGTTAGGCGATGCTCAACAATCGGCCATCACAACAACTATGAGA GCTGCCCTTATTGAGTCGtaagtattattattattgtatgATTTTCCTAA ACCCTTACAGAGCATTCTATGGGAAGTGTCAACCTCGAGGGAAACCAGTA GGTAAATTAAGACCTAGGGTCAGGTAGATTTTATTTGGTAATTGAACTTA AAAAGAACACGTTGGACTTTGACTTTCTTCCCGGAAGATAAGTCTCAATT TGTCCAAAGCATTCGCAGGAAAACCTATTTATGACGTGATGCTTTCTACA TGAAACACCCCACACGTAAGTAATAGCAAACAAACACGAATTTTCAGGGG gaacaaaattcttttttgaaatattaggGGGGACTTTCAGGAGGACGCTA TGGCTATGGCTATGGCCAAACTTCCCAGTCTCGTAATAGTTTCGAGATAA CATAACGGGTTGCGTAAGAAGTAACCAAGGAGcttattattttatttcat tatatcattttctttattttagcaTGACGTAAACGGCGTGGACGAACAAT GCGAAGGTTCGGTTGGGAATGGATGTATATAAAGAAAGGTGATTTGGGTA TACAAACGTATAAAAATATATACTCTTAACACTCATAGTTATTCCAACCA CCCCTTGTTTAACGACCAGAGTGTACCCTTCAAAATCTAAATCCAATTCC CGATTTTAATCGATATATGATCCATAGCTAAGcgattttctttagatttt gtATTCATTTTAGCCTAATTGTACCAGGGAAGTCAAATTATTTCTAATAA CCGGGAAGGTCGGACTTTACAGGAACACCCAAATCACAAAGTTGATGTAT AAATTTGCTGAGCGGCAGAGAGAATTTTTCTCGTGAGTTTTATAGGTTTA ATTTGGTGAGGTGACATtttgttattgatttttttacGAAATTATTGTAG CTTTTTTGCAAACAATAAACGAGATCTATatacaaattataaaaaaaata cttttttctttcttctctaTATCTTGTCAGCATTTTAAAGCAATTAGTAG CCTCGTGTTAGTATTGGTATCTTTTTGGTGACTACACGTTTTTCGTTTTA TTAGAAcacagtttataagaacattgaggctgaaattcgtcgaaaaatta agaacatgcccagcctcagtttgaaaaaaaataagaaactacaatttttt cctattttcaagcagttagggatggattttctaaaatcaagagtcaaata ttggccaaattttacgaattttaagtgctctttattttgcatgatgttGT CTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNAAGGAGcttattattttatttcattatatcattttct ttattttagcaTGACGTAAACGGCGTGGACGAACAATGCGAAGGTTCGGT TGGGAATGGATGTATATAAAGAAAGGTGATTTGGGTATACAAACGTATAA AAATATATACTCTTAACACTCATAGTTATTCCAACCACCCCTTGTTTAAC GACCAGAGTGTACCCTTCAAAATCTAAATCCAATTCCCGATTTTAATCGA TATATGATCCATAGCTAAGcgattttctttagattttgtATTCATTTTAG CCTAATTGTACCAGGGAAGTCAAATTATTTCTAATAACCGGGAAGGTCGG ACTTTACAGGAACACCCAAATCACAAAGTTGATGTATAAATTTGCTGAGC GGCAGAGAGAATTTTTCTCGTGAGTTTTATAGGTTTAATTTGGTGAGGTG ACATtttgttattgatttttttacGAAATTATTGTAGCTTTTTTGCAAAC AATAAACGAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055176TCONS_00055176Clytia hemisphaericatranscript
TCONS_00055177TCONS_00055177Clytia hemisphaericatranscript
TCONS_00055178TCONS_00055178Clytia hemisphaericatranscript
TCONS_00055179TCONS_00055179Clytia hemisphaericatranscript
TCONS_00055180TCONS_00055180Clytia hemisphaericatranscript
TCONS_00055181TCONS_00055181Clytia hemisphaericatranscript
TCONS_00055182TCONS_00055182Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055182-proteinTCONS_00055182-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:581490..592051 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EIF6eukaryotic translation initiation factor 6 isoform a Homo Sapiens
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
145.26 136.96 152.06 156.44 37.82 31.91 57.7 65.56 87.42 96.49 95.98 86.08 86.28 91.4 77.8 86.06 95.62 85.02 38.22 50.86 89.74 88.34 81.82 77.68 54.23 64.81 66.06 56.74 64 52.58