XLOC_034707 (gene) - C. hemisphaerica

Overview
NameXLOC_034707
Unique NameXLOC_034707
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_250:31279..40984+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034707 ID=XLOC_034707|Name=XLOC_034707|organism=Clytia hemisphaerica|type=gene|length=9706bp|location=Sequence derived from alignment at scaffold_250:31279..40984+ (Clytia hemisphaerica)
AACTCAAAGGAGAACAGACTAGGCTGCAAATGAAGAACAACGAGGAGAAA
AAAAGTTATAACGGGGTAGAGAATACTACAAGTGTGCTGCTAAAGAAAAT
CTTTACCTTTGCACTAATTCCGCCTTTTGCCGCTTTTCTTCTCGTGTTGC
CAAAACCTGGAATTGTTTGGGCGATGTCTGGTGTAGGCGCTCTTTTTGTG
CTGGGTGTGAACCTTTTGACGGAAGCAGCGGACAGTTCTATCACTAAAGA
AGGTATACTATacttttcaagtcaaatttgaaacgtcaaaaaaactaGTC
GGCAAAAATGACGAAAAGAAAGTCGTTTGCTCGGCGAAATCTTTTACCGA
AGGGGGTAGCAGCGAGAAGTGGATTATCGGATCAAACTATACTTATACAg
tatatattttcgaaaatttagcccaaaacccttggggaTAGGCATTTCTA
AGGGTTGGAGGGTGCCAAAAAAGGGGGGTCATTTAATAAGGGGGAATCAG
ACATCTTTCCGCACTATAATTCCTCTATGTCTACTATCTTATTATTCTAC
TCCATAGATGTTGATGAGGCGCTTTTGTTGTCAACCACTCCACCAGGGGG
GAAAGAAGCAAAAAACAAAGGTTTGTATAAAATTGCGTTAAAATTTGTCT
TCAGTTTTGGAGGGTAACGATATGAAGTTTATGAACATTTGAATTCCAAT
CATCAATTTTATTATTCTACCCCATAGATGCCGATGAGGCGCTTTTGTTG
TCAACCACTCCACCAGGGGGGAAAGAAGCAAAAAACAAAGGTTTGTATAA
AATTGCGTTAAAATTTGTCTTCAGTTTTGGGAGGGTAACGATATGAAGTT
TATGAACATTTGAATTCCAATCATCAATTTTATTATTCTACTCCATAGAT
GCCGATGAGGCGCTTTTGTTGTCAACCACTCCACCAGGGGGGAAAGAAGC
AAAAAACAAAGGTTTGTATAAAATTGCGTTAAAATTTGTCTTCAGTTTTG
GGAGGGTAACGATATGAAGTTTATGAACATTTGAATTCCAATCATCAATT
TTATTATTCTACTCCATAGATGCCGATGAGGCGCTTTTGTTGTCAACCAC
TCCACCAGGGGGGAAAGAAGCAAAAAACAAAGGTTTGTATAAAATTGCGT
TAAAATTTGTCTTCAGTTTTGGGAGGGTAACGATATGAAGTTTATGAACA
TTTGAATTCCAATCATCAATCTTATTATTCTACTCCATAGATGCCGATGA
GGCGCTTTTGTTGTCAACCACTCCACCAGGgggaaaagaagcaaaaaacA
AAGGTTTGTATAAAATTGCGTTAAAATTTGTCTTCAGTTTTGGGAGGGTA
ACGATATGAAGTTTATGAACATTTGAATTCCAATCATCAATCTTATTATT
CTACTCCATAGATGCCGATGAGGCGCTTTTGTTGTCAACCACTCCACCAG
GgggaaaagaagcaaaaaacAAAGGTTTGTATAAAATTGCGTTAAAATTT
GTCTTCAGTTTTGGGAGGGTAACGATATGAAGTTTATGAACATTTGAATT
CCAATCATCAATCTTATTATTCTACTCCATAGATGTTGATGAGGCGCTTT
TGTTGTCAACCACTCCACCAGGGGAAAAGGAAGCAAAAAACGAAGGTTTG
TAAATGCCTTTAACCTGATCTTCagtgtttggaaaaaaatgatatGAAGT
TTATGTGCATTTGAATTCCAAACTATTGCCCACCCAGGAAAATTGAGCTA
AAACTCCCGGGGTGGCTACTAGGGCAAATTGGGTTAAGGGGATAAATAGA
ATGTATAGAAGAGTCcaacgtagggtccatttttcaaacctcagcggagc
acccccgttgatcggcaagggtagtacccctcCGGGCTAAAGCTCAATAT
GCTTAGCTGATTGGATTTTCAGCTTTAAGTTATGCttagttaaaaaaact
tcaaagctTCCTtaattttgattcattttcatttccacTTGTTTCTCAAG
TTCGTTGTTAGTTTTTACATTCACCCGATACCACATTAAAACCTTCTTCG
TGTTCTTCCCTGTTTCATTTATCCCGTTTTCGAAGTTTCAATGACTTTAA
AAGGCTTCAAGATACGCTTaacattatgcttatttttttttgcaaatttc
agTATAAATATGCTTATAATCGTTATGCTTATAAAGCAAAATGTACGTAT
GTATCTGATTATTCTATTCTATAGATTATGATCGAGCCGCTCCCCCAGGT
GGACGACCAAATTTCCGTAGGTGTTTTTCATAAATAATCTTGCACAAATG
TCAATAGGCTTTCTTAAGTACGGTATCAATCCTTTCGTCAAAAGCTTTGC
TAGACTTATCAAAGCCATTTTTTGCCCTTCATTAtttagtcatttttcaa
aaagtggcaTTTTCGGGGGCAAATTGAAACCTATATAGGTGAATAGGTTG
GCTTTCAAAGATTCTAAATTTCTTTGCTGAACATCGCAATTTTTCTTTTG
GGCCAAGATGTATCCCGACGTCACTATTTCCCATGCAGAACCCTAAGCCC
CAAAAATCTGACGAAAAATCAAAGTCGCTACTAAAACCTAAAACCACTTA
TACTATTCGATAACTCTCAAAATTtgatatagaagacttttaaacgaaTA
TAGTCGATTTTTcaacctaactcgagaaaattgtcaaaacgggacttttt
tgtgatttttgacgtcaaatgagtGAAGAATTGACGTTTTTGGTCTTCGG
AGCTAATCTTTTCGAGTTAGGTTGAGAAATGGACTATATTCACATAAAAA
TTCTCTATATCGTTTTTTTAGAGCTATCGAATGGTATAAGTGCGGTTTTA
GGTTTTACCGACTTTGATTTTTCGTCAGATTTTTTAGTGAATAGTGCGAG
TCAATAGTGCGAGTCAATAGTGCTTTACTTGAGGATAACTGAAGTCATGT
TTTTTTTAGCTAGACGTAACGCTCAAGAACATTCAGAGTATCCAGCTTAC
ATTTTAGCGTCCCATAGATCTAAAGAATGAACTCCAAAAGTTTCAGTTTG
CGCCCccaccccaaattttttttaaaaaatggctGTCAGCTTCCTGACTA
TTTACCTCGAGAGTTAACCCTTTGTGCATCTTGGCCAAAAATTTTTACTA
GTTTTTCATagacttaatattttttcatgaaatttgggCAGTGTGACTAA
ATCAAGGATTGACACCTTCTGAcaaaattttatcattagtgATGATTCAt
tgccacctgatgacgtcatcaatttttgacATCTCCAAAAATAGGACCCC
GCCCCTCTAATTCTTTTTCGAgcttcaatattttttgcttaaattttgTG
TGGGAATTCCATTTGACATATGTATACGGGGCACACGGTCAATTTTGCCC
ACCTGTCATAggcgtgtattttacagaccgtcCCAGATTTgccttttttg
cctaaattagtgttaaattttgatatctcaagctattgacttgaaatttt
gaccagtgataGGTATTGATAATAGAAGCTTGCTCTCAAGACTTTAGTGA
GATTGGACCAGTAGTAATGCAGAAGGTGAGCATTTCAGGTAAAATACTGA
CTTGtttgtaaaataccaaccacgcAGGTGGCCgaattgaaattttacac
aTTGTCTCAGATGGTCAAGACCTTtcactggtgaaaatttcaactCAAAA
GTTACTGTAGCTCCTGAGTTCCGGAAAAGGGgggtgtattttacagaccg
gtctgtaaattaccaAATACCACCGTGGAACTGTTTTTTTCCCTATACTC
TGATCTAACTTGGCAAATGGATgcaatttcaacaaaaagtaCCAAGACAA
TCGGATAATTCATTCTAGCAGCTAATTtaacattctggtctgtaaaatac
caactaaACAGGTGACCGACCTGAAAATTTGTAAATCGTCTTCATATTTG
TCAATATCTGtcactggtgaaaatttcaagttcacaGCACTTGTCAATCC
TGAGATCCGAGGGGGAGGGGCTAACATGCCCCCCAAGATGCTCCACATat
aaaaaaataggaagatgcaCGAAGGGTTAACTTACTAGCCAAGATGGATA
GAAAAAGATACtaggaagatcgattaaaagATGGCAGAGGATAGAGCTTA
TGAACTCCACTTGACCGGATTTTATTCATCTTGATAACATCAGCAGTTTT
TTATGGGATGCAGTTTTTGCAAAGCGCCATCTAGAAACTTCTGAAAGGGC
GCCTAAAAAGCATTATGAGAGGGTGTTACGTCATATATACATCGAtttcc
ttttattttatagACCTAGAGTACGTACTAGTATATGATACTAGCAGAAC
GGATGCACACAGTTCCCATTGCGTTTTCATAAaatcgatcaaagatggca
atTTCAATTGTATAAATAGTTGGAGAGATATAGATCCCGCACCTCAAGTT
CGAATCGGGAAGGAAAAAAACAGACTTTGGAGAGTTAATGTGGAGTATAA
AGATCCAGAAATTAAAGGTAAACTGAACGAGATGAATGTTCCCTATAAAA
ATGcatttacacattttttttcttctcaacTGTAAAGCAGAATCAAAGTG
ACTGAATTCCATAAAAGAGGAACATtaaatcaatttcattttatcttGCA
GTGACAAGTGGATGTTCACAGAAAAGAGAGAATCTTTCAGGTATTGGCTT
CGAGcaacttttcttcaaatttactTGGGGTCTACAATTCAAAACTGTct
ggaaatatattttgaaagtgGGGTTATTCCCCGAATAACTTGGAAAAGGG
ATCCCGACAGATCCCCAGGGATCAGGAAAATTTCTTAGAGCAGAGGAGTA
GATTTGAATACTGTAGCCcagtaaaaagattttcaaaatctcatctCTTC
TCACGTCtgataatttattattttagagAGTGAGATTATGCAAAAGTTGT
CCGAATCCGTTGCTCCAAGCTCAAGGTATGTGAAAATATGTGACGCTTTT
CCTGTTAGGGTTGTGTTTACCTGGGTTCATTTATGGGCTGTGCTTCATCC
CTTCTCACCGTTTTTGCCATCTACCAAACTGTACGGTCAAAATATAAGGT
AATGGGCATCCTTTGAAATTTCTGCTGCGGTACTCTAAAACTCTCTGact
tttcattattttcccgAATAGGTGGGTTCCAACGGGTCATAGAAGAGATG
GTTTCTCTAGCGTCTAAAAATCTTCCAACATCGTTACAGCTTCAAAGTTA
CAAAGatttatttcagtttttttaaagaatctaagtaatcttcaaaaaat
tttacgtGCTAATGTCTTTTGTCTCACTAATTTTAGGTTCAAGTAAAATT
CATTCTTAAACCTCTGGGCAAATTGGAACATTTGAAACACCAAAGTTATG
AATTAATAAAAGTAAAGTCTCATCATTTTTTCCCTAGAATTGATGCCAAA
TCAATAAATAAAGATGAAGCTGAACTCACTCTTAAGGAAAATAATATTGA
TCGTATAACCCACCTGTATGTGATCGACGATGATGGTGTCGAAGACGTTT
TCAGTAATGGTTTTCGAATAAAGAACTCCCAGGAAGAAGGTTGTATTACC
GTCATTCTAAAAAACATTGATAGAAAAAAGAAGTTCAAAGTTGCTGTATG
TGGTATCGTGCGGGATGGAgacaatgaaaaagaaatttcattgACTTGTG
ACAAAGAAATTGAACCAAATCAAGgtaattttgaagtcaatctgaTTTCA
TTCCTTCCtcgtttttgttttattgaccAAAATGAATGAATTTTGTCGAT
tagcgaaattaaattccatcaaAAAGACGAAATTTCACGAATGACCTGAA
GCTCCAAGGGGAATTGGGatttacttcgaataaccggTGTAGCGGATTAT
TTTAACTCCCTGTAAATGTTGAACCCCCCCAGTTAAAAAAACTAGGAAAT
AATGACTCCCCTAGAGTAgaaatttcctaggaaatacTGACTCccttagt
aaataatgactcccGTAAAAGCTGAGGGAGTCAAGATAGTCAAGACTAGT
TTATCATGACCCCCCTCCCCAAAGTAGTCAAGAACTGAAGTCATTCCACT
GTCTTTTTATTtatatctaactttcatcacaTTGTGATTACTGTATTATA
TTTCTTCTAAAAAATCATTGTGACAAGCGCATTCTCTCGTTGatctcggg
taaattaatgcgtgtccaaattttcgtcaaTTTCTCGGAGGCAATTCCAC
CCCTCCTAGAATAACAAAtcatacctttaaagaagcgcattacgatgtag
aacatgaaaatcggcgttacttaaatttaggttttgccaattttgcgaaa
aaccgcaaaaacaaaaaaatgctgacgtcagcaaaatttattttttaaat
aactccagtttggctaatggtataaacatgaaatttggaccaaagttgca
aaTCATTAACAAAAACACTTTTACATAAtcctttttttcagattttgccg
acgtcagcagaaatcagcaaaatacgaaaatttgcaataaagtgctgaca
tcagcaaaatttcaaaaaaaaatttcaaaatgatccttttagtgatgtgc
aactttggtccaaatttcatgttcataccattagtcaaactggagttatt
taaaaaacaagttttgctgacgtcagcattttttggtttttgcgattttt
cgcaaaattggcaaaacctaaatttaagtaacaccgattttcgtgttcta
catcgtaatgcgcttctttaaaggtataatttattatgctaggaggggtg
gaATTGCCTccaaaaaattacgaaaatttggacacgcattaatttacccg
agatTTCTATTGTCCccgtttttcagattttaaaaccTATTGAGAATTGC
TTTAAGATGCTAAACTTTGCTAATTCGTTACTTCTCTCGTTCAAGGCtat
gaaataagaattttttgcagAGCTGATTTTCGTCGTAGACACCCACCTTT
TGccgaaattttttcatttttcaagggactttgaagaattttcagAATGT
ATGGTGTTTTCACGTAATTTTTGGTAGACACGAAGTTTAAACATTTATTC
TTCATCTGGCTTCTCGTCAGTATTTTGTAAAATGATCTTACAAAGAGGGA
AGTATACAGCAggtcttaagggctctgaccatagtcatcATATTTGTCAT
gtataaaatgtgtttttctgACTAATCTACGATGCAAAGCCATCACacgt
tatacattttctgttaggcaaactattcctgaatctaaaaaagtaaaaaa
ttgatgaagaagaaaatgaaaacagttgcttttgatcaatttttcatccc
aatttctCATACAAAAAGATAGCCttgatatccagaccgtaaactctttc
accgtctagtttttttttggtattttgtctctggtttacggtctggtcca
agtaactcgtctgcagggatatctgtccctgcatattgTAGACTGAGCTA
ACAAAGGGGGAGACGGCTCAGCGGAGAGATCAGTAATTTAAGACTGTATA
TGGTTTCGTACCATCGATTAACTTATATTCTCAATTTCAACTTATAATAA
TTTGACAGCGTTTAGTTTACATGAAATGTCTTACAAAATAGGTTATACTC
TATTCGTGTCTCTTTCAATCTCCGTCTTTCATCATCTAAGTTGCAGCTTT
TATAGCTGTCAACGGAATGTTAATGGAATGTCGTTAGTTTTAAATTAAGT
AACAGATATTGGCCTTGGGCCGTATGAATCTCATTTGTATGTTTGTTGCG
GTTTGATCTTCGATCGTTATGTAAGGTATAATTTCAGCATGTTTCAGCAT
TTGCGTAAGTTTTAATCATCGATCGTTATGAGATATTGGTCTTGGTTGAA
CCACTTTCTGATGGGGTGGCCAGCTGGCTTTAAGCTCCAGCTGACAatat
atgcgagtgtctctaattggtcagtacgcgctcagtcactgagcagaatt
ttcgcggggtttgtgatatttttcgatgcgcgtgcataatttatggaaaa
agctgaccttgcaaaaaaagataaacaaatgaaaatgaaaacgcaggttc
atttctaaacaaaatggccgctggaaaagagcctttataaatgtggctga
tgttttgatgtagcttaaagtagttttgaaagtttttttgagtttgtaaa
agaggttttttagtaagttaattatgtgtgtcttcctgggtttacaaagt
tttgatagtctgtcaacaagggttcactcacagactGTGCCATTCAAACT
GTACCATACtgttttagttgcaccagactctaaaattttagaaactttgt
atgttgaggtaagagtgtttttttctaaaattttgagtctggatacccag
gctaacaAAAAGAGTCATCacttttgatacatcaatttagaaaaattttc
tgaaaaaatttagatagttcaatcttttgcagacagttaaaaaaaaattc
gaaacaaaaaggttaattacttaaaactaagcattttttgtaaaataaaa
attataacaatttattaacgtctttttaaggtCTGTAGCGTCATTTTTGT
GATTAAATTGCTAAATGCTCTTGATAGAATGAATTCAAAGACaatatagt
agagggcattttgtaaaatcgctcgactgttttgttagaagcacttgtta
tacatttttggaaagctaaggggtagcgcaatcgaaattactatgtttcc
aattttttttcggacactttggtgtgattttcggacaaatatgacggtct
caggcaaaaatcatagggttaaaaattaatgaaaatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcaaaa
actggacaaaatagctgtttctggctgaaaaacacggttttcaagggtta
atatctcgagttaggtaggTAGGTTTCAAGAAACTTAAAACAAAAGTTAT
ATCTTCAAATCTCGTAAACATtttttcgactatggtcagagcccttaagt
ataAAAATTTTGAGCCAAATCTAAAAATTCTTGAAGGAAATACTGCCCTC
AGGTGGAGTATTTCTTTTACGAGGGTCTGTAGAGTTAGCCCTGAATAGcc
aaataaatttcaaataattttgtcataGATATTAAAGGGGAgtcatttta
attcaatttgtcTCCAGTTTTGGGAGGGTAATGATATGAAGTTTATGAAC
ATTTGAATTCCAATCTTCAATCTTATTATTCTACCCCATAGATCTTGATG
AGGCGCTTTTGCTGTCAACCACTCCACCAGgggaaaagaaatcaaaaaat
gaaggtttgTATAAAATTGCGTTAAAATTTGTCTTCAGTTTTGGGAGGGT
AATGATATGAAGTTTATGAACATTTGAATTCCAATCATCAATTATATTAT
TCTACTCCATAGATGTTAATGAGGCGCTTTTGTTGTCAATCACTCCACCA
GGGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055087TCONS_00055087Clytia hemisphaericatranscript
TCONS_00055088TCONS_00055088Clytia hemisphaericatranscript
TCONS_00055089TCONS_00055089Clytia hemisphaericatranscript
TCONS_00055090TCONS_00055090Clytia hemisphaericatranscript
TCONS_00055091TCONS_00055091Clytia hemisphaericatranscript
TCONS_00055092TCONS_00055092Clytia hemisphaericatranscript
TCONS_00055093TCONS_00055093Clytia hemisphaericatranscript
TCONS_00055094TCONS_00055094Clytia hemisphaericatranscript
TCONS_00055095TCONS_00055095Clytia hemisphaericatranscript
TCONS_00055096TCONS_00055096Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055092-proteinTCONS_00055092-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_250supercontigscaffold_250:31279..40984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.48	1.11	1.52	2	22.56	22.08	84.41	74.62	63.86	80.55	93.67	67.24	114.21	90.75	130.13	135.04	106.4	115.72	113.65	130	80.28	78.73	49.23	58.25	111.85	107.23	69.23	86.96	71.59	80.29