XLOC_034505 (gene) - C. hemisphaerica

Overview
NameXLOC_034505
Unique NameXLOC_034505
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_245:472155..476329+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034505 ID=XLOC_034505|Name=XLOC_034505|organism=Clytia hemisphaerica|type=gene|length=4175bp|location=Sequence derived from alignment at scaffold_245:472155..476329+ (Clytia hemisphaerica)
CTAAACAAAAATCAAGAGATCTCGTCATAAGAAATGTGAAATCTTTAGAA
ATAACATATCGAAAAGATATTTCCGTAACCCTAATACCGTGTACAGATAA
ATATAAGATTTATCTATAAGATAAATATAAAGCAACAGTGTGGAGGTTTA
AGTTTCTGGGGAAATATCCCACGGGTAGGGGAACGGAGAGATGTCTTCAT
CTGATCATCAAATCTTGGAGGCTGGAGATCAGCCTCATCCTACATGTTCC
TGCGTATTCGATACCTCTGGAACACATGCTGCTCTATCTCCATGACAACT
AACGCATCATCATGTCATTAAGTTATCAGGTTTTAAGGCACATACCAAAG
GAAATTATATTGGAACTAAAATCGCAATATTTTTTTCCGTGCCGATAATG
TCAAAAAATGTGCGAACCTGGTTTTCTTGACCTGTGAAACTTTCCCTGAT
TAAATGCCCTTTTTGTACAttccaaattatttttgaaaaaatacactTAG
AGGTCCTTTAAAGTTTCTTAAAACGAATTTGATGTTTTAACAAGAGTCGA
GATAATTATCTTTGCAAAAAACAAGAGGTTTTTGTAGTAAGAGAAAGAGA
GAACGATTATCATAGCATAGCACTGACGTCTAAGTTGTTATGACAACCTA
AATCATAAATATTTATGATAAGTCTTTTGTCAATGATTGTTCAAAGACAA
TAGCTTCCTTATAAGGCACAATACGGTTGGAAAATAAGACAGAAACCATA
AAACTGGGAAACGAGAACGAAAAGTTCAGTTCATGAATAGAGCGAGAGAG
TTCGGTCAAGTTCGTTTTTGAAAAGTCGGCAGCGGATATTAGACTAAGTG
AAACATTTACAGATGACCTGGAGCGCGAATATGATTCCACTAAATGATGG
AACAGATTTGAGGGTTTCTTCTATGATCGATCGCATACCTAATCTACCAT
GCTCAGATTCACAAGTATCTTGTATGCCAGATGAAAAAGTTTACACATCA
CAACAAATCACCGTCAATAGCTCAACTCCGAATAACGAAGACTGGCGAAC
GGTAAGACTCGCTTCTCGTTTTTTTCTCgactatttttttctttctctaa
ttttttcttactttcttaTTTTAGTTAGTTCCATGTTCCTGTTAGTTCCA
TCTCAATCTTGAAATGTATCTTAAGTGATGGAAATACTTTTCTGTAGAGA
AATCATGTCACGGTTAAAGCAACCTTGAATGTTAgaacttgaattttttt
gttttttactttcTCTTTTTGATGTTAAAGTACCATAACAGCGTGTGCTA
GCTAAgtcaaataaataaacaaacatGAAGCTACCCCTCAGAGatcagat
ttttttgttttctcttaaCCTTTCAACGTTACACTTAATTTCCATAACAA
CACTACATACAAATTCTTGCTTCAAAACACCGTTGAACTTATTATGAAGG
CATTCTCATTATAATGACATGACATTtctttaattaatttttctcctttt
gaATTGCTTTCTCCTATTGTCCTAATGCCGCTTAATGACAGCTTTTTGCA
AATTAAATACAATAATGAGGCATCATTTGTTTTGCTTTTCCTTGCATTAA
TCACCAGTTTGAAGAGAGGGGCACTTCGAGCTCAAAATGTTCTTTCTAGC
CTCGAGAAAGCCTTCGTTAAGAAAAAGTAGCTACTATAAATTTTTAATTG
ATCCTTTAGTTTTAAGTTTAGTAGTAAGATTAAGAATTCTATTCCATTTG
TTTCTGTTGGATAGCTCCCTTCGTGAAAGGGAGAGTTCCATAACTTTctt
ctgaattttttgatgtgcagaaaaagaacaaaacatgaCGAAATTTACTT
TTCTCTTCTTTACAGACTTTGAATGAGATGGACGTATACCTTGCTGAGGA
CGAATTCACTCgtcaaaatgttttcaacaGATCACCAAATAAACCAGTTT
GTCTACCTACTTCAACCATTGTTTCAACACGCCAGCGACGCCCATCCGTC
GGCCGTGTGGAAGAATTTTGCAGTGAAAGCGAAAGTGATTCTTCTTCTAC
AACATACGATGAACCAATGCATGAAAGCAATTCCCTCATAGAACACGAGC
AAACACCAATGGGAAGCCCTGTTTTTCACTGTGCTTCAAACACCGTCAAA
ACAGAAGTACCTCCGACTTATTTCGAAAGTATGAAATGTGAGCCCACCAG
CCCTTCAACCATTTTTACCTCCACCACGACACTTTTCTCACAAAAACTTA
ACAATACAACATCTTCTCTACAAAAATCATTCATCAATCAACCTCCAATC
AACGTTCGTCCGCCACCTTACCTAGATGCAGCCACTATGGCTGCTAAACG
TCAAACATATCGACAAACAATACCTACAACGAGAGCATTTCCCATCAACT
TTAGTTGTGCTCCACTTAGAGACACTCAAAGtgaaatcatcaaaaataag
aaaacacaTAGATGCGATTATCCAAACTGCAATAAAGTATACACAAAATC
GTCGCACTTGAAAGCTCATTTCCGTACACATACCGGTGAAAAACCGTACG
AATGTCAATGGGAAGGCTGTGATTGGAAGTTTGCTCGATCTGACGAGCTG
ACGAGGCATTANAAAAGCCTTCGTTAAGAAAAAGTAGCTACTATAAATTT
TTAATTGATCCTTTAGTTTTAAGTTTAGTAGTAAGATTAAAAATTCTATT
CCATTTGTTTCTGTTGGATAGCTCCCTTCGTGAAAGGGAGAGTTCCATAA
CTTTCTTCTGAATTTTGTGATGTGcagaaaaagaacaaaacatgaCGAAA
TTTACTTTTCTCTTCTTTACAGACTTTGAATGAGATGGACGTATACCTTG
CTGAGGACGAATTCACTCgtcaaaatgttttcaacaGATCACCAAATAAA
CCAGTTTGTCTACCTACTTCAACCATTGTTTCAACACGCCAGCGACGCCC
ATCCGTCGGCCGTGTGGAAGAATTTTGCAGTGAAAGCGAAAGTGATTCTT
CTTCTACAACATACGATGAACCAATGCATGAAAGCAATTCCCTCATAGAA
CACGAGCAAACACCAATGGGAAGCCCTGTTTTTCACTGTGCTTCAAACAC
CGTCAAAACAGAAGTACCTCCGACTTATTTCGAAAGTATGAAATGTGAGC
CCACCAGCCCTTCAACCATTTTTACCTCCACCACGACACTTTTCTCACAA
AAACTTAACAATACAACATCTTCTCTACAAAAATCATTCATCAATCAACC
TCCAATCAACGTTCGTCCGCCACCTTACCTAGATGCAGCCACTATGGCTG
CTAAACGTCAAACATATCGACAAACAATACCTACAACGAGAGCATTTCCC
ATCAACTTTAGTTGTGCTCCACTTAGAGACACTCAAAGtgaaatcatcaa
aaataagaaaacacaTAGATGCGATTATCCAAACTGCAATAAAGTATACA
CAAAATCGTCGCACTTGAAAGCTCATTTCCGTACACATACCGGTGAAAAA
CCGTACGAATGTCAATGGGAAGGCTGTGATTGGAAGTTTGCTCGATCTGA
CGAGCTGACGAGGCATTATCGTAAACATACTGGCGACAAACCATTCAAAT
GTGCACATTGCGATAAAGCTTTTTCACGATCAGATCACTTAGCTCTTCAC
AATAGAAAGCATACCAACCAAAACCATTAAAATGAAAACGATGAATGatg
aaaaaacaataaaacgaAAAATTAAGCTGGATTTGATTTTAGTTTCTTAG
AAGTTTGACAAAATGTACTTTGTTGCTTTATGCAACTCTCCTTATTTTCG
AGGTTGGGCGGAGAGCCCGCGATGCCTTCTTTGTGTTCTGGTTTCTCCGC
CCTCCCGCCATAGTTAGTATTTTTCTGTTTAAAAGTTTATATTGTATATA
GTATAGAGTATGAAAAAGCAAACCTTAATGAACATTTTTGTAAGTATTTG
TACATAACAACAAAATCgagaattttttcttataacaaaacttTAACGCA
GATATTATAAATAGATTTTATGAGCCACTACACTGCTACCACAGCAGTTA
GTCAAAATAACTTACTTTGtttcaaaatagaaatagaaaattgaagaaat
gaaaaataagtttgttatTTACATCCTTAACTCTGGTCATTCCCGCCCCA
GCGaaacaatttatttttgtcCCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054781TCONS_00054781Clytia hemisphaericatranscript
TCONS_00054782TCONS_00054782Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054782-proteinTCONS_00054782-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:472155..476329 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.74	0.7	0.36	0.07	8.96	6.39	4.08	4.35	12.92	104.45	24.34	31.83	247.74	327.22	473.62	378.58	118.82	133.23	357.43	182.19	14.86	15.61	10.17	8.68	12.52	5	28.62	66.66	18.17	12.8