XLOC_034398 (gene) - C. hemisphaerica

Overview


Name	XLOC_034398
Unique Name	XLOC_034398
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_243:820401..830390+

gene from alignment at scaffold_243:820401..830390+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_034398 ID=XLOC_034398|Name=XLOC_034398|organism=Clytia hemisphaerica|type=gene|length=9990bp|location=Sequence derived from alignment at scaffold_243:820401..830390+ (Clytia hemisphaerica)
NNCACTTTCCAGAACATGCAGTTCTTCGAAAACATCCCGTTCCCAACCCA
AGTATGTTTGAAACGCTCACCAAGTCTGCTACAAGTCTGGTAAGTGGTGA
TGGTTAGTGTCAAGTTcagaaattgatgaaaaatgctTTCGTTCTACTAT
GCAATAGGGCATCAATCAGCCTCAAAATTCTATGAATTCTTAATAATTAC
TTTAAATTCCTTCTTGGATTTCTTCGTTGTAGGGAGTTGAGTTGGACATA
ACCAATGGCAAATCTTTACAAGCGAGTTTAGACGGAGCAGTTTTCCCAGA
TGATCCATACAAAAATGTCATGTTAAGAATCTTAACCACTCGTTGTATGA
CAACTGCCCTTTACTTCTGTTCTGGAACTGATAAGTTTGACAACTTCTTT
CACTTTGGTTTGGCTGCACCCATCTACACGCATTTCACTTCTCCTATTAG
AAGGTATTACTTATTTTAATTGGCCCAGCGCGGTTAGCGtaagggccttt
catttgcactGTGCCCGCTGTAAGTAACTCGCATGGTAGACGGAGCTCGT
TTTATTATTTGAGGAAAACAAAGATTACAGGCTAATCATCAATTCTTTGC
CGCGGAAAGTCATatacttttcaaccaatcaatggtttaactcactaaaa
gaatTTATTCAGCGATAAGAGAATgttaatctttagtaagtgtgATCTAA
TTCTACTCAAACTTTATGGAACTAATAGATTCTGTCTTGTTTTCATCTTT
GACGTTTGACTGCTTCAGACACACGTTTTTTTACCAGTTGTAACTATCAT
TATTGATGCTGAAAGTAGTTTTTCCTGCTGATCCTGTGGGTATTTATTAC
AATAGTGCAAATACAAACATCCATATCATTTGGTGCTGACTGTAGTTTCT
CGCTCAGTCGCGAATCTGCTCCCTGCTATCATCATATACATTTCTTTCAA
AAGGTAATTAATTAAATCattgagacatttttttaatataggcgactatc
aaaaatatgttctgttTGTGTCAGCCGACCGACCAAGAAATTGGCAGACA
AAGATTCCAAGTCTGACAAGTCGGAAAATTGTTGCAATTTTTCATCGAGC
GAGCGAATAAATACTAAAAACTATACTTTGGAATCACCTAATTTACTACC
GTCATCCTTTACATCATTTACGGTTCAGTTATAACAATCACACCACCATC
TTCAAGACTTCGCTGGTCGCAAATGAATAATAAAGAAATGGCGGcttcaa
attgaaattgaaacggTGCACACCAAATTGCCAAATAAACTGGAATACAA
ATaccattttagaaaaatggacgGTTTCCACATCCATACAAATCTTTCGC
CCGCGGGCACTGCTTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtctattgttctctgcgtacgtacaagggag
gagggggtatcaaatttttggaaaatctttttgtacgtactatatggacg
gccccctAAATATTTAAGCAAGTTCGAGAGCTCACAGAAACCAGTCCTTC
GTTTCACTCTGTATGTAatcatgaaaataaaacaataacaaaatgacACT
CTTGTGCGCTCGTAAAAAAAAGTAATGGCTGATGGTTttgacgcgaacgg
aacatattttcgaTTGCCGCCAAAATAATAATAGTGTCTATTAAATAGAT
TGTGCAGCTCCCTTTTAATGTTGTTGCTTGGAGAACGTAGCAATGTTGGT
CGGACCCCTCCACACCCTTCCCGTAATTCTggttttctggattttttttc
tgtgCAGTCTTTGCACTCCATCGCTTTTTAAaagggaggtaaacaaaccc
attTTGTTTGCTTTTCCTTAGGGAAGAGTGGTTTTTGgcctttttggcct
ttttctcAACTTCTATTGCatggaatttttgaaaacttcagTATGCTTTT
ACTACCAGTCAGCAATGCTCAAAGAAAAAGATAACAATTTTTACGTTTGC
TCTGAAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTTTTTAGGAG
AGAATAGCAATTCAATAAGAAATTGAcgtttcatattttctttttcgttt
taggAATCAACGCCGAAACCACCGATCTGTCGGTGGAGTGTATACCATAC
TACACAGCCAAACAGCCAAATCTTACTAAACTTAGCTTACTAAACTTACT
AAACTCAATCAGCTTACTCGGTTAACAATACCGTTTTGAAATATACATTG
AAGTTTCCTGGGAGTTTCCTGTgtcattttttttgttcttcCCTTCGCAA
AGTAATCTTTAGGCGAAAAATCATGATATCGATCGAAGCTTATTGTAGTT
CGATCGGCAACTTTAATGGAACTACGTAGGCAATTTGACCTTCGTTCAAT
ATACCGAGGCAGGGTGGCCAGCGATACTGGAAATACTTCaaaatacttga
atatactggaaaaaaatattggtacttgattatactggagtttttgaaaa
aatgcccatttttccagtatatacttgaaaatgataaatNttcaaaattt
ttttttgtcggaCCCAACTCCAAATAATCATGAAACGACACTTGACCTAT
TTAAAATTGATggttgtatttttgaaaagtttgaaaggtAGCGACATGAA
AAGTGCTACTAACATGAAAAGTGCTCGCCAATTTTCTATGTTAAAAACTC
TTGCTAGAAAATAGACCTTCAGGGAGCAGTGAGCCATAGGGAAATGATTC
TAGAAATAAGAAGTNATgtataaattttccaaaattttatattcggaccc
aaccatggtgggtctTCCTGATAACAATGTATTGTACCCTATTTGTAAGG
TTGGACATTCTTGGTTGGTCTTATTCACTTAATAACCTATTTGATAtggc
ttttttaaaaaagatgaaCCCTAATGGgcatacaaaaaatgaaaaaaagt
aaaagtagaATCTTAGATATTCTTCAGCTCAAGTTATTTACTGCAAGATA
ACCCTcattgagaatttcaaaaatctagccTTTGGAGCATACAAAAANGC
AAATTgggaaaatgtcaatttttcagcaaagtttttgatttgactgaatt
gacTAAACTCTTATTTACACGGTTTATTTGTCTGCTAGAACTGGAAATGT
CTTAAAAGTCTTGAAGTCtgatatttgaagaaaatatttctgaTAGTCTC
TAGAAAACATTCTGGAAATATCGGAAAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTAAGAAAGGGAAGC
CCATAAAATTTCTGACAAATTGAGGATCCGGATATCCCTATTCTAACGAA
GCACCATACGTAAAGTTCAAAATATACTTGAATGTATTTGAATTTTGCAC
CTTCATATACTTGAAAATAGCAAAGATATACttgaaaattatcgaaaatA
CTCCAAAAAGTACTTGAATATACTTGATTTTCAATGACTAAAATCGCTGG
CCACCCTGCGAGGTTTTAAGGTTGGCTCGTCACTTCCCAATTAAGAGCTT
TCTAGACTTCTTAAACCCTTCCCTTTTTTAGCAGAATCTTTctaaagtaa
aagaaagtagaTCAGGGTTTTcgaataccttaaaggaaaaaattttggcg
gaaagaaaatttggcggatttgactgaaatttccggattttccgccatcc
gccaaattaaacattttgaaaatatgatctcttttaaggtgtttttgcta
ttttatcttaaggttaaatttttaagcgaccgctaaattaaattcccgcc
aaatttagttttttcgtccatccgtcaaattaaattccctctgaaaaaac
ttttttggccatccgccaaattaaattccctccaaaatttcttcctttaa
ggtagtgtttttcaaaaagtcgaaaTAATCTCTGTAATCTGAAATGAAGG
TGCGTTTTAGCTCCGAACCAGGTAGAAGAATGTGCAtgctaaaatcattt
tttataaaaaggctTTTAAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTTAACGGAGGAACAGAGCATTTAATTTTTG
TAGAacgttatttttttcaaggagATAAAAAAAGCATTACTAATACATAC
GATGGAATAATTACAAGTAGTACTAATGACTGTAAAATGAAAGATCTATG
TTctacaaaataaaattatttcttaaaaaaaaactcctATAGCTCTATTA
CAATAAACATTGCCTTACATTCTTATAAAAAACGTACCTATTGGAAACAC
CTGAAAAGACGGAAATTGACCCATGTGCTGTTATTTCTATTAAAAAACAA
TATCTGAAATACTACAGATTATTCAGTGCCATCTACAAAACCTCTATAGA
AGGGAGGCTGCGTACCAGAAATATACATTTTAACAATATAAATATGAAAA
ACTATGTTCGAGAGGCCTTGAAGCGTCACGGGAGTAGGCCACTTGGTGTC
AGATTAATATTGTACATTCGATACAATGAAAGACGTCTTATGCTGGGCCG
TAATGCCGCCAGGCTACTTGTTCTGtctttgttttaacattttgtgAGCC
GGTGTGGTAATTGTATAACTTCACGGTGGGCACAAACAGACCCTGAAAAT
GGTGGGTTAATTGCTAAGTTTTAGGGAAAGTAGAAAAACTCAggagtttt
gaaagtttaaatcTTGGAATTTGAAATAGTTGAAATTAAGATGATAAAAC
TCGAAGTTTTAAATATTTGACCATTACTTTACAAATACATGACTCGAAAA
AGCTTGCATCTACATTGATTTCCGTGAAAACTTAGCCTACACAAGTAGCT
TACATAAAATTCCGGCTATCTAATCGCTTGAATTTTGTCTGAGCAATGGT
ACAGTTTGAGCTAACGAGCTAAGGGTTGTTACTTTTCTCTAATAGATACC
CTGATGTGATGGTTCATCGTTTATTGGGAGTAGCTTGTGGTGCTTACAAC
TCCTCTGCCGCTTTTGTTGATCAAGAGGCTGCTGAGGTTTGCACGAGTTA
TTTTCTCTCTATTTAGATATTTATTACAATGTtaagtttcttttgttttt
ggatCTAAATATTTGTGATTGATCGTTATTTCCTCTATATACTCCTGGAC
GAGCTTTTACGATAATTCTTTTAGCGAAACTTGGTGAAATGATTTTTAAT
TCTtctaatttttgtctttttgtgtttcttctttttctagaAAGTGACAA
CGCACATGAATTATCGACACAAAATGGCGCAACACGCTGGTCGAGCTTCG
GTTAACTTACATACACAAGTACGTCAATCTATCAATCAATTTCATAATCA
CTTAACTGACATGGAATGAGATTTGTATCACTATTAAGTAGCTTTATTTA
TATGCCTAATTCATATGTAGCATCGAAAACCGCAACAACTCAAGTTACCG
CAAAAATGATGAGGTATTATTTTGTAAGAAAATAGAAACTTAAATGCGGT
GGAGCCAACTCTCTGATTAccctttttctcttttttttaagattttcttc
AAGAATCGAGTGTGTGATGAAGAAGGTTACGTCATGTTTGTTCGAAAGAA
CGCACTGCAAGTACTTATTCCCAAATATGGTCTGGAAGGGACTGTTTATT
TGTCCAAGAAGAAAGAGTCAGAAGGACTTTTCAAGTTTGACGAAGAGGTA
CGCAAAGATACACATTTTGACATTCACCAGCGTCCCAAATACTAAATTTT
AACagtgatttttgtgattttattgCATGAAAATTTTGCGGCATGAAAAT
TTCGTGGTcattttaatttcgcggtttttttgccgaaaattgcatttcgc
ggtaTTTTCATTTCGTGGTTCAAGCCAAAATGTGAATTTCGCGgcatttt
aatttcgcggtccaggagaaaaagtgtatttcgtggcattttaatttcgc
ggttccgAAAAATCGAAAGGAAAAAATTGCATTGTAAAAATTTTTTAGCT
ATTCTTTATCACAAACAAGAAATAAGGCGTTGTTTTAGTCATCCTTTTGA
CTATATTTTCCTTTAAAGCAAGTTGAATCAGTTAAATGCATCCAAATAGT
TCCTCTCTGGTTCGAAAACCTCATCGTCGAAAATCGATCGTCATCATCAT
CGGTATCCTCATCATCGGTATCCTCATCTGATCCACAGGGTCAGTAACCA
TGGAGCTGCCGATCTGCCAAAAAAGCgggattttttatttatttcggGAA
AACCGGGAAAAAACCGgattttttatacattttaatttcgcggttgaccg
aaaaattcgtttttagcggcattttaatttcgcggtttttcagCCTCGAC
CgcgaaaccgcgaaattttcatGCAATAAAGTAGTTCAAAAACGTGTTTC
TGTCTCAATGTCTCGAGAGCTAATCATAGATTTATTTCGACATGCATGGT
TTTAATGAATATATAAATGAGTGAGTGAATGAATGGATATTTTTTATCTC
AGGCACTGACCCAATCATTTGGTGACACGACAATTCATGTCTTTGATAAA
GTCATCGTTCAAATgagcattgaaaaaaaaactatacaATCCAGTGAAAT
GCAGCTTAAGCTCGTGCGACCTAAGGTACGTTATTACATATATAGAGTTC
TATCACCACTTAATAATTTAATGATACTGTGTCAAAATGTTAACTAAGTC
GTGTATTATTGATCAAATTGTCGTTTCTTTGGAAAGATTGTTTGGAATTT
CTGGAATGAACTTTTTGAGAGTATCGTCTACGATTGCTATTCAGATTCTC
ACCAAGGATTAAttaaatttattgaatatttcaagcTTTACTGCTGTGAC
CATGATGAAACCCTTTATTatgaaagtcaaaaataaagctaATCAATTCC
TTTATAAAACATCTCATCTATACGTTGGTTCACTcgatcaaaacattctt
ttataaCGTTATAGAAGCTCGTGAACATATTGAAATGTACTCTTCTCTCT
CTTATTCTAGATCCCGGGATTATCGGTGGAACCCGTCGATTCCAAACTCG
ATGAACCCGACTCAAAACGACTCAAAAAGTGACTCATTTGATTCATATTT
TTTGCttttacgaaaaaaaattttatcacgTGTAAATGGTATTTTATACA
AACGAGAAATATAAATCCTAAAAAGAGTCAATATTGATTCAACTACTGAC
GACTTTCATGACGTGAAAATGATCCGTCCCTAAAGAAATTGATCAAACAt
cctttttgtttcatttttgtcaaagttttagCATAAAATCACAAAACGAT
ATTTAAGTCCAAGTGTCAATGAATTGTCatgtttttgctaaaaaaactAT
TTCGCTTTTATTTCATTTAATCCATTTTTTGACCCTTCAC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00054577	TCONS_00054577	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00054577-protein	TCONS_00054577-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_243	supercontig	scaffold_243:820401..830390 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.62	8.38	11.85	11.76	35.48	24.42	28.48	31.95	30.31	30.1	31.03	28.23	45.89	52.65	37.06	39.77	38.16	41.58	25.82	24.72	41.39	35.34	49.92	44.98	47.6	54.27	31.37	48.17	51.71	54.98

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XLOC_034398 (gene) - C. hemisphaerica