XLOC_033854 (gene) - C. hemisphaerica

Overview
NameXLOC_033854
Unique NameXLOC_033854
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:689437..693409-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033854 ID=XLOC_033854|Name=XLOC_033854|organism=Clytia hemisphaerica|type=gene|length=3973bp|location=Sequence derived from alignment at scaffold_233:689437..693409- (Clytia hemisphaerica)
TATAAATCGACTGAAATTGTTACCGTAATCAAATCTTTTGGAAGGGATAA
CAGAATTCCAAACCTTTCCTACAATGATATGACGATTGGTATTTATTTTA
ATAGAAGAAATTACAAAACATATATCGCGATGAGTTTTCGACATGGTATG
AGTGTGGACGACATCACATTGTCGCATATCGAAAAAGCGCACCAAAACAT
GAAAGACTTATCCAGCACACTCTTCATAGAGACACCATTGGTCCATGGGA
TGGAGAATCGTTTACGTGGAGAAATTCCCAACGTTGATTCGTTGTCGTTG
AAATTGGAATGTTTACAAAGCACCGGTTGGTATGGGAGAGCTCTCGAAGT
GTTTTGAAAGTTTTCCATTCGTCAGGTGGCTCGTCTAGCTCAAGATTTTA
ATAAGAATTATAGAATAGGAGTACTTCCTTATCGGGGAAAAAATGTCGGG
GGAAAGTGACGAAAATGCCTGAAATGGCGAAATTTATCCCCGACGAGAAA
AAACAACCGACTAAATAAAATTCCGACATTTTTTCCCCCGATAAGGTATG
TCTAAAAAAAAAGGAAGGGGAAATCTGAAAAACGCCGTTTTAAGATTTTT
CCTGGTGGTATTGTTGCGAGCTTCCGATGTACGATGCTAGTTATGTCTCA
TTCTTTTCTTTCTCTTCTCTATTTTCAAGAAAGGCTCTTTCAAAATCCGT
GGTGTGGTCAATCAATTTCTCAACTTACGTGACGAAGATCGACAAAAAAA
GAGAACCTTGGTCACCATGTCTGCTGGCAATTATGGGAAAGCTTTTGCGT
TCGTTTCGAATCAAGAACACATGCCAGGTGTTGTGTATATGCCCAACGAA
GCACCAAAGGACCGTCAAACTACAATCGAGGTTTGTCCACAGGGTCAAGA
TAATTGAAATTGAAAACGTTGGGCTTATGCAATGCTCCCCGCATTTGATT
GAGGAGGTCTCTGAAATTTCGACTAATATTCAAAGAATTCAACAATTGAA
GAAAAAAATTTTTAAACTAAAACTAAACTAAAATCTCTTTAAAAAGTGAC
CACCTATTGCTGTAAAATAGCACATTCTATATTATAGTCACCAAGTAACT
CAATTTGCTTTCTAATTAATGAAAATGACTTTCGCTTTCAGTCATACGGC
TGTACAGTGAATCTTTCACCAGTCCAACAACTCGTGGAAAATGTAAACAA
TGAAATCGAACGAACCGGTGGAATGTATTTTCATTCTTATGATGATCCTT
TCCTTATTCTTGGAAACGCCAGGTCAGTCTTCTTTCTTTTCTTTTGTTCT
CTTGTCCGAAGGTTTTTGCTCACTTAACTACTTCTTTGTCATTTGCATTT
CATTATCAAAATCAGCTACAATTTCAAATCTTTAACTCCTGCGCTTTTTA
CGTTACTTTACTGGGATAAATTTCCGCGGGGATTGAATTTCGCGGTTCAG
CTCATCCGCGAAATTTCAAGATTTCGCGGGGACTTAATATCTAAATATCT
TTCTAAATTTCCATTGGGACTTAGTTTTGGGGATGACACCCAAATCTGCG
AAATTTAGTCCCCGCGAAAATTTATTTTATTAAAGTAGCCCTTATCGTTC
CTTTTGGGTTGGACGTGGGCTGGCTTAAAAGACAAAACGAGTTTTATAAA
TTGAAAGTTCCAGATTATTGTAGTCGATGTTTGGAAAACTCAAACGGCAA
TCAATCTGAAACCCTCTGATGATACCTATAACATATGGAGACATATTTAT
TTGTTACTCTCTCTATTTTCTGTCACAGTGCAGGTATGGAATTGATGGCC
CAGACTTCGCGACAACAGCAACCAGATATCGTATTGGTGTGCTGTGGAGG
TGGTGGTCTTTGTGCTGGTGTGGCTGCCGCTCTCAAACTATCTGATGGTT
GGAAAGATACAAGAATTTATGGTGTCGAAGCAGAGAATGGTGGGTCATGC
AAGCTTGTGAAATATAAAATTGTGGATTACCTTTAATGATTTTTAGGGAG
CTGTTCTAACAGAAAGGATTGCACACTCTTGTCGTAACGAGGAACCACCT
TCTAAGATTTGAGAACTTTTCTGTATTCTTCATAGTAGAGTATCGACCGT
GTTTTTTTTTATTTCCAGTGCCGAAAATGTACGAAGCGTTGAAAGCTGAT
GGCCCAGTGCCATTCAATCGAAAGCCAACCATCGCGACGGGTCTCGCCCC
TCCTACCGCTGGTATGTAATATGGTATTCTAATCTCTGTCGAAATCAATG
TGTATTTTCAATACGACAATGACTAGTATTTGATAGCTGCACTAGGGAAA
TAATACCAAGACAAAAAAAACACGATTCCGTGTATATTGTATAAAATCGT
GTAAAAAAAATTGCTTGAATTATGTTGGTTAAATTTCTCATTCAGTGAAC
AGGACATGTCAACACTGAAACCGACAGTCAGTTCTTGTTTTTTTCATTTT
CAGGTGAGATGACTTACAAGATGATCAAGAAATACACTGAAGGGATTCTC
CTTGTCTCTGAAGATGAACTCAAAAGGTATCCCTCATAATTCATATTGTA
TGTTTTTCTCAATTGAAAGTAGTAGTAAAAGCTAATATGTAGTATGTTCA
GACTGTATTTGATTAGCCGAGACCAATTTGATTAGTTGTTTGACGCCCCC
CCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGACCGACCTTG
AAATTCCACAAATCGAAATATAAATAAAATTCATTTTGGAAGTACATTTT
TATTTTCATTTGCTTTACAGACTCCAAAATTTTCAAAATTTTGGTAGTTT
TTCAAAAGTTTTGAGAAATTTATATTCAATTTTTCATTTCATCCATGGAA
TCGACCTTTACGTGCCTTCTTATTTTCTTTTGCACATTTTTGTCAAGATG
TAGTAGTTTTGCTGCCTTTTTTAGAAGATTTTAAAGGTGAAATTCTACTT
TTATTTTTATATTTTAAATTGTCCTCGCCTTAGAGAGTTTATATCTAAGT
AAAGTAATAACAAAAACTATAAGTTTATAAATCGTCGAAACAAAGTAAAA
AGATGTGAAAGAAAACATCATCTTTTGGTTTTCTGGTTCATTGTGTAAGG
GAGTTTTTATTGCGATTTAATTTATATCCATCCTCGTGCAAATGGTTAAG
TTGTTGATCGATAAACTAATAACTCCATGCATGTACGACGACCAGTTCCA
TTTCCAAAAGTTGATTTATAAGGAACAAGTCAAGAGAAGAAGAGCATTTT
TACAAAATAACCTAGATAGAAGACCAGAAAGACTTGCTATTCAGGTGAAT
GCATTACTTCGTAAAACATTAACTATCTTTAGATAAAATACCTAAATTTT
CGTACTTTATTGTTACGCGCTCGTCGTCCTTTTTGTTTTGTCATTGTTAC
AAAACAGCATCAAGACATAAGTTGAATCGTTGCTCTTCCATCTCTCATTT
TCACAGGGCAATGAAGACATTGTTTAGTCTTGGTTTGGTGGTTGAGCCGT
CAGGTGCGGCTGCGTTCGCTGCGCTGCAATCGAATAAAGTACCGGAAGCC
GAAGGGAAGAAAGTGACGGTGATTGTGACCGGTGGAAATGTCACTCTTAA
AGATCTCACTCAACACATTGGACTGTGAAAAACATGAATTTTTTTTAGTA
CGAATAGTTTTCAGGCCAGCAGAAAATATATTTGATGAAATTTGTAATCC
AGCTCCTTTTTTAATACTAGATCCATATATTATATAAATACACCATTCAC
AGACAGATTTAATGTTGGTTCGTTTAAAGTTTCTCAGGCGATATCATTCG
ACTTCGACTAATCAGATAGTTTAAAGTTTCCCTGTCTACAATCTACTGTC
CCCTCGTTAAGAAGATAAAACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053677TCONS_00053677Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053677-proteinTCONS_00053677-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:689437..693409 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.67	28.13	20.56	17.27	13.29	11.33	12.98	13.59	16.66	11.66	18.18	18.28	27.75	28.36	42.38	42.95	27.6	23.81	15.24	15.28	12.21	11.2	15.13	13.14	8.62	8.47	7.62	8.04	9.45	9.83