XLOC_033584 (gene) - C. hemisphaerica

Overview
NameXLOC_033584
Unique NameXLOC_033584
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_227:59484..64683+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033584 ID=XLOC_033584|Name=XLOC_033584|organism=Clytia hemisphaerica|type=gene|length=5200bp|location=Sequence derived from alignment at scaffold_227:59484..64683+ (Clytia hemisphaerica)
CTGAACGTTATTTATATATTCACAACAGCTACTTTTGAGATTACCAAttt caactatcctagttttcaTTTTGAATGAGTAGGTTGCATTTTCTTGAAGG GAAAGTAGTTAAAACATGATTTTTTTGGAGGTATGTTATTTCTCATTTCT GTGTTCTGCAATGTTGACAGAACACTTTTCTTGGNTAGTCAAAACATGAT TTTTTTGGAGGTATGTTATTTCTCATTTCTGTGTTCTGCAATGTTGACAG AACACTTTTCTTGGTAGattcaaaatggctgccgaTTCATATTTCACAAC ATCAACACTGAGCAAGTAGGTGATGTGTACCTCGCTGGGTAAGAAAATCT CTCTCTAATCATGGCTGTTTTCATTAAATCCAcaccttttatttttttag tcaaaatattacaaaataatGGAAAAACCATTTAAATGGGCTGGAATCAT CAATATCGGGGAATCAGTGAATGATTTGAGATGGAAATCAACGCATGGTA CAATGAAATACCGCAACAAATTCATTTCCAAAAGAACTTTTGGCAATTAT GAGATATTTTTTGAAGTACATCAATCTACTCTCAACTCACCTCTATTTGT AATCAAGCTTTTCAAAACTGTTTTAGTAGACGATGAAGTAGAAAGTGTTC AAGAGAAGACGTTTAATTGTAAGGCTTCGACAACGGCAGTCAAGAAAATG TTGGGTTATTTAAAAGTGGAAATCAAGGGTAAGATTGTCGGCAACTCTTA TTATGGTTTTTACAAAGATGAATATGTTGATGGAGTTAAAGCAGCTGAAA TAATTTCTAAACAAGCCTCAGAAGCAGTAGAGAATAATGTTGACAGCGGT GATGCTGATAATGTGAGCTCATCATCTACAGGTGATTCAATTTTTGCCAC TTCATCAGGTATGTCAAGAACTTCAAATTGGCTGGATGTGGTTGAGTGGG GAATTAGAAAAGACCACCCTGCGTTTATTAAAAATACAGGCCGTAAGCAA GATAGCAAGAAAATTTATCTCCAGCCAGGTTATCATGCATTACGCACTAT CAAGCTTGTTAGCGGAGAGATGATGACCGTGAATCTGAAAATCAAGGAAG AAGATAATAAACCAAAATATGTCATATCTTCTGAGCATGATGAAATATGT GAAGAATCATTCATAATTGGTACATGCCTTTCCAACTTTTTAGATAAGGC TAAAGCAGTTCGCACGAAAAAAAACTGGTctggttttgaatttttcggtA TGCAAAGAACTGACGTACAACGTAAGCTGGTTGCCGAGCTTGATGAGCAT CTTGAAGGTTATTGTCCAGGTGAGATAAGTGAGGATGATGGTGGTGATGA TACAAACCATGCTCAATTAATCAAGTCCCAACCACttatgaaaaacattt tgaatatcAGGAAAAGAAACGCTGGACCGACCAGCAGTTTATGTCCTAAA GCAATCAAAGCCCGCAATGAGGTCATTCATAATGTTGTGAAGTATGTGTC GTTTGGCGATGAAAAGtgtaaatatatatatatatatttttttttaactc tcCCAAAATAGGTACAAATTCTGAATCACGAGGTAGTTATTAGTTCAAGC AACCCaatatttcaataattttctttaaGGTCAGAAAAGTAGAACACAAT GGTGATGTTAAGGCTGATGTCCAATTTGCGTGAAGCGCGCGTAAAACCTT TTTTAAGTTAACGTAATTAGTTGATTGAAAATAGAAACAATTCCACCGGT CAAAATTGACATAAccgttgaaaaaattaaatttcctttaaccttttttt gtttgcctgaagttattaatttattattaatttattttaagTAAATTAAT TATTTGGCAattattttttaacctttcttttTCCCTTTTAGCATTTGTTC AACATCTCATCACTGAGTGTCCAGATGTAATCGAATCAGCTTTGGAACTT AATGAAGATTACCTTTGTCGAATTATTTCAAAACTTAATTTGAAGACTAA ACCAAAAACTTTGAACGAGAAGGATACAGCTGAGATGCTCATTGGGAAAG CTGATATTTCTCAACGAGGCTATGGGAATATTCGTACCATCCTTGCTGCA AAATCTGTTAATATTCCTTCTtacaaaaatgtgaaaacatATGTGAATGA GTTGAATGTTGGAAATATTGCCCCAATACATGAAAGTGAAAGCAATTGTA AATGTATGGGGTACTTTTGTACAGTTACTGAGACACTTCAAATGATTGCT TCATGTAatgatcttttttcaaaaatgaagtttttctctattgaaagaca aaataaaatcagaaaatttttgatttcaaaagatGAAGACCTGTACCACA ATTTTGATAGTCACAAAAAAACCATATTTTTGAGAGACACTGGAGACAAC TTCCGAGCAGCGTCAAAATACCCGACTGAACAGACATCATTCAGTGTACT AAACATTGAAGAGCTAATCACATGTCCATATGGACAGTTTATTTCTACCT TATGGAGAGGAAAGGAGTCACGGGAAACTTTGCGTACACATGTCTCAAGA ATTTACAACGAGCTTACAGATTTGGTGAAATATGGTGTAGATTTAACTGT TGGTGatgaaaaagaacattttaatattGTAGTAATAAGTGTTACTGATT TAagttttacaaaagaaatgttgGGAAAGTGCCAGTGTACTCACACATTT GGATGTATTCATTGTGAGTTAAATAGTAAAGAATGGTGTTCTCTGCAACC AAAAGTTGGTCAGTCGCAATCGTACAAGAAAATGATAGCACGAGGAGAAG AAGCCCTTGAGAAGTTGGGCAATTGCCCAGACAAAGGTAGTCAAATCTAC AAAAAGTTTACATCAGATCATTTTGCTCAATGGGTAGGTGCAATATAATT TTGCTGTACAGAAAAGGTTTAATTTTCACGCTTACTAATTTTCAGGGAAC TTATTTCCCTGCTAAGAGGGTCTAAAATATCTATATTTCGCAGAACTAAT AATCACGCTTGACACCCACTTTTTGCTAAAGTTTtctcattttcctaggg gtatttgaaattatttgacAAAACTGCATATTGCGGGACTAATGTTTTCG ATAGACACCCAGAGACAcccaaaaacgcaaaaattaattcccacaaaaat tagttccgcaaaaattaattaccACAAAAACTAGTTTCCTTAAGGTATAT GGAttactcttctgtgcttaattgaCTTTTCTCGCAAAGGTGTCAAAAAC CTTAATTTTCCCACCAAAATCACTCCAATATCCCTTAATTATGACCCCCa ccccattttatgatttttctaccAGAGTGTCCACTTATCAGACCCCCCTC ctcctacaattaagcacagaagagtacCGGATTATGGATaaccctttttt ctttttttcaggcaCCAGTCTTATTCAAAGGAACTATTGTCGAATTAACT CCACCTTGTGCTCTACATATGATATTGGCCCACCATCGCTATCTCTGGAA ATTTCTACATCAAACGGTCACCAAAAGAAATCAAACGCACCTTATCCCAG TAGCTTTGAGAAAAATCGGTTGCACTTATCTTGCTTTCCAAATTGAATCC TACCATAATAGGTAGttattgttttaaagaaaataattttatcagctATT TTTGTGATACCATTATTTACAATGCATTGCTGAACAAggatatttttgaa tgaaaatttctgccagcacaggattttaaattttataactacacgttttt tataagcatataacaCTTATAAGCATACCCAGGCTCAAATCTTGGAATAC TTAGCATAACGAGGCTCACAAAAATTTACcctgtgcttataaaaaaggtg tataATAATTAAAATTCGAGATTTTAGAGTTTAATTTTGTTTTCCCATAG CAAAAATAAATCGTACGATGGATCTGACACACTTAAGATGATTGGCAACG ATTGCAAATTAATGGAACAAAATATCGATACGTTCTTGAATGTCTTTGTA GAAGAGCTCAATCAATCCTGGAATTCTAACAAGACGAATTCATTGAGAAG TATATTGAAGTTGTATAATGCATTTAGTGATATTGCAAGGTatcttttct caaatttttgctgATATAATTAATTCTGATTTTATGTTAAAGATGTTTAT TCTAACCCAATCTTTGAGAATTTTGAAGAGCAAGTATCTTTCAGAAAATT CAATAGAGACCCGTAGTATACAGTTATTAAAATTCTAATAAtgaatttag aaaaaacaatCGCTAAACGtacaaattatttctttttaggGATCTCAGAG CTACCCATGCTGACGAAACAAGAATAGAATCGTTTCAAAGAAGAGTAGAA GCCTTTGTTCAGCTTTTTCTAATCCAGTCTCCAAAGAAAGTCGTGGATAA GATGCCATATCTCCATTACCTGAGGAATCATGTTAGTGACCTAATGAAAC TCTTCATGCACCTATTCGATTGGGGTTATGGCTACTTTTCAACAAATGCT GGTGAGCATTTAAATAAACGTATCAAACAAACTGAGCTCTCTCACACTAA CATGGACACACAACGATTCCGCAcaatcatacatattttacgtACCAAAC AATTTAAGTTTACTGCTTCCATCATGTCTTCAAAGAAGAAAACCAGCATC ACTTGCTCAGCTTGTAACCAAACGGGACATAACAAGAGGAACAAGTCATG TCCAATGCATGAATCCCATCCACCTATTATCTTTGATGATACAGATGAAG AATCTGGAAGTGAAGATTAACATTTTACCATTTTCGAAATTGTATTCTAG AGTTTTTTTCGAATTGTAGCCTAGTTccttattttattgttttaaaaagt tgaGACATCATTGTATTTTATGCCCtttgtttcgaaaaaaaaaaggtaCA GGTGAGAGCCGTGGATCGAATCCATACTTGGCTGGGTGTACCAACTTTAT CAAAAGTACAGCCAAATTCTAATGCAAATCATATCGAAACAGAGTTTTAG GATTATTTTACTTATTAGATTTGTATTTTTTGCCCTTTGtttcgaaaaaa taaacaagcgATACCTGGTTATCTGGAgaacaaaatataattttgctcat tttcttacaaaaaacacATCTCGCAACGGAAATTCACGTCTAAATACAAA TACACTCTTTCAAATTACTCACCCCCGTATCACAGACCGGTGGgacccca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053201TCONS_00053201Clytia hemisphaericatranscript
TCONS_00053202TCONS_00053202Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053202-proteinTCONS_00053202-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_227supercontigscaffold_227:59484..64683 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.13 1.1 0.39 0.3 2.54 1.86 2 1.64 0.61 1.2 0.85 0.55 0.49 0.4 0.13 0.3 0.14 0.21 0.12 0.16 0.03 0.06 0.32 0.34 3.82 3.2 0.61 0.35 0.2 0.21