XLOC_033490 (gene) - C. hemisphaerica

Overview
NameXLOC_033490
Unique NameXLOC_033490
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_224:21853..26348+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033490 ID=XLOC_033490|Name=XLOC_033490|organism=Clytia hemisphaerica|type=gene|length=4496bp|location=Sequence derived from alignment at scaffold_224:21853..26348+ (Clytia hemisphaerica)
TTTGCATTTATGGTTTGTGACGTGAGAATTTTGAAGCCACTACAGTGCTg caaacattccattgaaagattttcgaacgtttgaCAAACTGATCAAATCG AACAAGATAAAGGCGACAAAAGTAATTTcttgttttggttttggtggATG GTGATTTCCATGATTTATCTTGATAAAGGCGCTCTATACTAGTCATATTA CAGTGAAAACGTACGGGTAACACACGGGAACATAAATATGTTCGAGTTTA GGAAACTTAGAAATattgagtaaggtttataatTGAACAGACGAGACAAC TTGTTCGAGCTACAGAGGTTTgagtagtctagcaagctagacgactaatt tatacatagtagaaataaagcaaaaagtaatgaatggaacaattttagtc gtttagaaacctttgtgcactaactctaaacaaaagaaaagtgtcaatat tgcaatttataattttttcctgctcaaaataattcttgagaaaagaaata tgtgtggatttgtgtattgaaagttttttcatttgagttgatttcgttct gagagtttgttgttgcttgataaattgttttctcgctacgcaagtttctg cgtagctagcccctgtatctataaggctggaacaccggattcttccagtc gtttatacaaacttaatcccgtattattattattagtattggtattatta gtattacacgcataatcgtcagccgtgcaaaattactcgaatctgattgg cttagaggagtgcgattaattgttaattgcactattaccactttttgcac tcttcggcggggggacacttttgtccccttattcttttctctcccaagtc ctgtgtcagagactttttttactatataataaaaaaacaaagacattttt tttcttcaatataaaaaagaacaaagaaattttacgttacaatagcttct tttaattgaaaacaaagaaaaattacactgcaatgttttctttttaaaca aaagaaaaaaaggaggtttttgacgattactagtacttatAAACGACTCC GGTCTAAGgtttgagttaaagagactgaaaggttttatttttacataagt tagaacagcgtccgagattcagaaaaggctttaaaacaggttttcgtaGC TATCCagctgtgagaaagatttttcctaaaaatgCTCCCAGCAAAATGCT GATGTGACTTAGCActtagaccagcggccgaggtagtgaatCGTGCCACT TCGTAGGGCGCCACTTAGATTTCAGACacgtatttcatatcaggacagtg tctgtaTGTTATTATATTAttctgatataagcaaaaaattgtttatttcc tctttctgaccaattttgtgccacatccgtgtcaattgaatgtgaaaaag cttgtgaattgaaattgatgagtaagcaaacgatatctaAATTCATTTTT AGGTTATCAGTCTAAACTCGAACTAGATTTAATACCTAATACATTTTGTG AAAGTGTTGAGACTTACTTAgaaataattggcaatttacagttaaaaatg ctCTGAAGTGAAATGGCTTTTTTTAGGGTTCATTTgataaattccatgat ggtgatattctaaacatattcttaaattttttggcCAGTCTCgtgaatat tcttaaaagtatattcttagaaaaaaagcgtgtaaccttaagggaactaa ttgtTGCGTAACTAATTTTCGTTATAAAgctttttcacatgcacgtaaaa ttttactttagaccttaTGGAAAATCGctcgtaaggctgtcttttgggaa ttttccCGACTTTGGGAtggtggggaatttccctaagcttacgtatTGTT TTAAGGCGTTATCTAGAGTTTGCttactttcaaaaagttttgaacggaaa ggaaagtcacgtaagaccctcttaatcGACAAAAACTCTACATATTGTCG GGGAAATTCTCATAAGACAGCATACGAACGATTTTccgtaaggtctaaag taaaattttacgtacatgtgaaaaaagcttcaGAAACACGAGATAGAAGT TATTGGTAAGACGAATTTCTATTTATCCAGAGTCAAAATACCAACGATAT CTGCGTTAAAAAATGAAAGCTTCGATACTAGTGGTATTGCTGATTTCGAT CATTGCTTGCCAATTGGTGGATGCAAAGAAGGAGAAGAGGAAGCCCCaaa atgataaagaaaaaaaactcttcAAAGAGCAAATTGAAAAACGCCAGAAA GATGCAAAGAAGAAATTTAAAGATATGAAGAATTCCGATCAGGTGGACCG TATGATGGGCAATTCTATCATGAGAGCAGACAAAAAAGGAGGAAAACTAG CTATTCAAAGAAAAGGACAATATTTCGttatgaaaatcaaagaaattgta GCAAGACATTCAAATGAAACCGAGGTACAGTTAACACAGATTTTTAGTCT TATAAAATAAGCATATTGAAGAAATTTTCCGGGCCTAAATGTCGCCTTCT ACCAAATAGCTTTGAATTTACGTCACACTTTCAGATAGAATCTAATTGAT TTAGTCCCATGAAAATTTCACGGAGCTAGCTTGTTACAGTACCCTAAACT CTATAGGTGTCAAGAAGCAGATTCACGTGTTGTTAGTGAGATCTGAAGCT ATCAACGGATGGTCTGTTTTAACTCAATTAACTGAAACTCTTGGAAAACA CTCCAATGCTTTATTTTAACTTTGTGGTATCCCGTGAAAGATTAGAAAGT GCAAAAGATCTGGTTTCTATTTCCtatggtttttaaaaattttgcttttc ttCTTTCACGTCACATCAGATCACAAAGACAAAgctaaaagatgtcaagt tcaCAATCACTGGAGATAAGAATGATACGTCCACTTATGGTGTCCAAGCC GCTTATGTTCAAATGGTCGGTCGATTACCAAATGGTGGGAATGTCACTCT CCAGCTATTCATGTTCAAAGATGCTGGTAATGTCACAGGTGAAGATGGAA ACGTTTATGAACTTGTTGAAGGAGGAACCAAAGCGAATTTAAGAGTGTAA GTAGCTATACTGATAGAAAGCATAATATTCTTTATAGCGTGGCATTTTCA AGTCGTGCATAAGGCCTATGATAACCAATAAGGTATAGTTGAAGACTACA TTCGAATCCTCTATGTAGATttaaagccacttattttctACATAAGTTGT GCGCCCTGCGTGTTTTTCATACAAACGCTAGATTAGATTATTTCCATCTC CCTGGGTTTAAAAATTCTCTTAGTTTCTCCATTACCATATGACTCACAAT TCTAACTTTACAATTAAAGGCCTTCCCTTATCCTGAGAACCCATCACCCT GAATTAATATAATTGGGTCTTCCACTTTCACACCTTTACCAAAGTTGAGC GCAATGCTTACCTGTAAGTTACAGGTTTTACATTGTCCGTAAAAGAATTG AgctatttgaaaattttgaaaaaatttattcacTATGGTCATAGAGCCCT TAAACATGAGAACTTTTTTTATCGACGCTTCCTCTCATTCTTCTCGAACG TCCGAAACCTCCCCTTTGCTCTTACTCAAAGTATATTTTAGGTATCATTT CTTTACATCTCTTTCAACCATATCATTCTTTAGAGAGTGGCCAAACGAAG CTGATCATCTGGACTTGGTGATTGCTGTCCAATGTGGGTTTGATGTGAAA AAAGCCAAGAAAGCTATGAAGGCTATGAAAACACGTGGACGCAAAGGAAT GAAAAAGGCGATGAACAGACGTAATCCCGAAACATTCTCCGTCTGCTCCA ATGCCCGAATGACCTTTTCACCAGCGGTAAATCataatgaaatttcttga taCTTAATATTCTCATTTCATAAGTAGTTTTAAGTTTGATGAGTATTTTG CTCCTAAACTCCAGAACGTCATGTTGCTAGTACAAAGAAGGCCTCTAAGC TCTGATGATAAGAAATAAGAAAGGTTAAATATCTTATTGGACAGATAATA GATACGAGTCCTTCTatgattgtttgattttcactttttagtCTTAAGTA AAGCTAgctaaaatgaaaatgtaaagaACTTCTTACGACTCTAGTTATTC ATTAAGATATCAACGCTTGCATTTTATGCTTCATCGATTTCAGTACAATA CCAGTATGAGCGACAACAGCACTAGTATGGACTACGACATGCCAACTGGT TATCCTAAATCAAAAGAGCTATCCGGTGAAGGCGAATCCGAAATCGTTCT TCGATTTAACGGAACCAGAATTTTTTACGATCCAACTGTAGAAACAGGTG AAGATATTGGCGAAGAAGCCGAATTTGAAGCTTCCAACAACGCCATCTCT CTACACACGCCTAACCTCATCATTGCGGTAGtattttcgatgattttttt aaaacttttattgtAATGCAATATATGATAACGAGTTGAATGTTACTTGA ACCTTAAACAATGCAATACTGAAATACAACAGACACAAATTCTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053024TCONS_00053024Clytia hemisphaericatranscript
TCONS_00053025TCONS_00053025Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053024-proteinTCONS_00053024-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_224supercontigscaffold_224:21853..26348 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.35 10.09 7.69 7.98 3.13 2.41 7.75 9.05 13.18 11.56 9.52 9.53 3.12 3.31 1.86 2.12 2.48 2.49 2.7 2.97 2.96 3.04 4.18 3.18 416.65 220.94 2.14 1.67 2.87 2.8