XLOC_032340 (gene) - C. hemisphaerica

Overview
NameXLOC_032340
Unique NameXLOC_032340
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_192:45588..54593-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032340 ID=XLOC_032340|Name=XLOC_032340|organism=Clytia hemisphaerica|type=gene|length=9006bp|location=Sequence derived from alignment at scaffold_192:45588..54593- (Clytia hemisphaerica)
GCATGTGCATGTTCAAAACAACACGTCCGAAGCTTCGAAACCCAGGTCGA TACATTTGCTGTCTTCCTCTACACACCCCCAGTTGAAATTCAGTTTGTAA TTGAAAACGAAACAGAAAAGTCACATTTGAAAATGGTAAGATTCTTTTTA TTTTCGTTTGATTTTTCTTGATAAAAAACTGGACAGTTTGCGTTTACAAC CCACGATATGGCCAGAAAATAACTCAAACAATTTTGGTTTTTGTTTGGGC CAACAGCAAAACATTCTTTTGGTCCAAATATTGATGTTTTATGTCCAAGT TTGGGTCACAAAAAGTTTTATTTTTAACTCCAAAAGCCCAGCCCAAACAC GTCTCAACACGAATATACACAGACCAGTTCAGACCATAAAATATGACCCA TATAAACACGCACACAAAACTTTTGAAATTTTCGCCTCTGAATGAAAAAC TACTAACTTAACCAGGCTGGGTTCAGGACTTTTTCAAGTTCAAAATCCCC AAGGGGTTGTGGTTGTGGGAATCATATGACGTTTTGCTTTTCTGCTTCTT TTGCACCTTCATCTTCCCATTGGGCTATTCCATTTTTAAACCATACAGGG GTATTGACGAACTTTTCCAGGNATGTAATGGTCTTTTGAAGTGCTTGTTC TAAGAGATGAGTGAATATAATTGTTTTTAGTTTTCAAGAGAAGCAAATTT AATCTTTTTTCTACAAGATTAACTTTAATATAACGCAAATTATGCATGCA AGTTTTTATTTAATACTTTCTTTTTGCATATGTTTTGCATACTTTCTAAG GGAATTTCACCACAGCAATTCGGCCACCATAATTTTTGCATACAATTCAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCATTGGAAAGTCTATC AGTCATTTTCTTCTGTCTTCTTTTGAAAGAGTATTGAAAATCGACAAAGC AAAAGCTGAGCTGATTGCTCACCAAAAGTTTTGCTGTGTGGAGACCATGT ATAAACAAAGATCATGGAAACTGTTCGGTAAAATATTTGCTTTTCGTTCT GCAAATTACCGCTCTGGATCTAGCCTCAGTGATCTAATTTTTTATTTGAT ACTGTAGGAAATATTGCTGGATATTTTGCTTTTGATAACAAATTAAAGGT TTAAAATGCTTTGCTTTTTAAAAAACTTTCGAAATTCTTCAAATCTTTTA TATTTTCCACTACCACGAATTTCAAATTCTTTTATTTGGAGAATAGGCTA AATCAATGATCATGCGCTGTGACGTCATAGTTCACGTGCTCCATGACAAA GTGCATGCGTGCATGTTCAAAACAACACGTCCGAAGCTTCGAAACCCAGG TCGATACATTTGCTGTCTTCCTCTACACACCCCCAGTTGAAATTCAGTTT GTAATTGAAAACGAAACAGAAAAGTCACATTTGAAAATGGTAAGATTCTT TTTATTTTCGTTTGATTTTTCTTGATAAAAAACTGGACAGTTTGCGTTTA CAACCCACGATATGGCCAGAAAATAACTCAAACAATTTTGGTTTTTGTTT GGGCCAACAGCAAAACATTCTTTTGGTCCAAATATTGATGTTTTATGTCC AAGTTTGGGTCACAAAAAGTTTTATTTTTAACTCCAAAAGCCCAGCCCAA ACACGTCTCAACACGAATATACACAGACCAGTTCAGACCATAAAATATGA CCCATATAAACACGCACACAAAACTTTTGAAATTTTCGCCTCTGAATGAA AAACTACTAACTTAACCAGGCTGGGTTCAGGACTTTTTCAAGTTCAAAAT CCCCAAGGGGTTGTGGTTGTGGGAATCATATGACGTTTTGCTTTTCTGCT TCTTTTGCACCTTCATCTTCCCATTGGGCTATTCCATTTTTAAACCATAC AGGGGTATTGACGAACTTTTCCAGGGGGGTCTGAGCCTTGATTTTCCAGG GGGTTCTCTCCTCCTAAACTGGCATCAATAGACCTTTTCGCCTTTCCGTC CGCCATCTTGAATTGTATGCAAAAATACAGGAACAAAAATGTCGTGGTTG GATTTAGTTGAAATGTATGCAAAACATATGCAAGTTTACACAAAGATTAA AAAGACAACAAAGCATCTTATAAATAAATATTATAATCATTANGGCCGAT GGCTTTTTCCTTTTTCACAAAATTTCACTTTCCATCCAGGCGTGTCGACC TAATTTTCCAGGGGATAGTTTGTTATCCAAAATTTCCAGGGGGGTTAGTG AAAAAAGTTTGTCAATACCCCCTGTATAATTTTTTTTTGGAATAGCCCAA TATTGTATTTGAATTTTCTGGATTTTTCAATTTTTGGTTTAAATTTTTTT AAACAATCAGCACTCAGGAAGGTCAAAGTTTGCCAGAGGACATGGTCCAT CAGATGACATAGGTGTGTCGCCCTATTTGGTCAGAAAAATAAAAAATAAA TATAAAAACTCTTTAAAAAAGTTATTTTTAACTTCCTACGAATTTCCATT TTATTTATTACAAATTTGGCTTCGAAAACACTATTTGATATTCCCTGGAG CAGCACAAACTTGTTGAACTGAATTGGGTTATAAAACTGATCAAACACTC ACGATTTTTTACAAAATTTCAATTATTGATTTATTACTGTGAGATCGGGT AACTTGCATCAGTGGAGGCTAACATGCATTGCCATCAAATGAGTGACCAA TCAAAGCAGCAAAATTTCAAAACAAATGAACTACACAGCTCCGCTCGCAA TCTACTCTACCATTTTTGTTTTGATTTAACTTTGTATTTTATTAAGTCAT TCATTTGAGGGCTATGCATGTTTGCCTCCAATGATGCAAGTTACCCGATC TCACGGTAAATGTCAAGAGTTGGGTCAAGCTTGATTTAAAGATTAGTTCA ATAAGTTTGATTGATCGTGACTTCACTTTTTTTATAGGCAAAAGCTTGTT AATCCTCGTTAATCCTGGGTCAGAGCAGGATTAATATTTGGCCAATTTAA TCAGAATTTAATCCAGATTTAAGCCTATTTTTTTTCGAACAACTGACGAT TCTGCATTAATCGGCGCTAACAGGCGCTAATCGAGATTTAATCGAAAATT AAGCTAATCGGCCGCTAATCCACTTTTGAACAACCGTGCCCTTGACAATA AAAATTGAGTTTTGAATTCTTTTATATTTCAGGCATCTACTGAACCACTT AGAGTTTGTGTCACAGGAGCAGCTGGTCAAATTGCTTACTCCCTCTTATA TAGCATCGGTAATGGAGATGTCTTTGGTAAATCTCAGGTTGGTCTTATTG ATTATTTTGTTATAATAGAAAGTTTTAACATTTTAAATTGATGTTGATAC TTCATATCAATCAAATAATCCTGTTCTAAGCAATGATCAGTCTACATCAT TCTCCATACCCTCAAGAGAGTCAAAAAATATTGTGTCTGATATTTCCCTG TTCTCTTTTTATTCTAGCCAATTACCTTACTCTTATTGGATATCCCACCA ATGATGCCAGTCTTGGAAGGAGTTGTAATGGAATTACAAGATTGCTCTCT TCCCTTACTTCATGGTAAGTTCAGCCATCGTTATCATCAAAAATTAAGAA TTGTTTTTATTTATTTACTAAACAGTTGGTTGACAAGTCTTTGGCATTCG ATTTTTTTTGTGAAATGGTTTGGTTTTTAATCTCTCTTCTCCTAATTAGA ATTCTTCAATTTTACTAAAATAACAAGAGAATTTTGAAGGAGAGTTTTTG GTATTTATCGTAATCTGTTTAATGTTTATTATTTGTAGAAGTCGTTGGAA CTGCTGATCCAAATGTCTCATTCAATAATGTTGATGCTGCCATCTTGGTT GGTGCTATGCCAAGAAGAGAAGGAATGGAAAGGAAAGATCTTTTGAAAGC TAATGCTAAAATCTTTGAAGACCAAGGAAAGGCTCTTGATCAATACGCAA AGAAGACGGTCAAGGTACATTTTTCTTTACTTCCTCTTCCCATGATAAAT GTAAACAACATTGTGACAAATTGCACTTCTTGTTTGTTGGCCACAATATC CTTCCTCTATTCTTGAACAACAAGATTCGAACTCCTCCCTAGTAATGCCC CTCTTCAGCCCCTCTCAATCCCCGATCAAATTTCAATATTTTCTTAACTT TTTTTAATGGATATGTTGTAAAAGATTTTTTAGAATGTAACCGTCAATTC TTTTCATTTCATTTAAAAAATATTTTACCTGTAAGTTAATTAATTTAATG TTTCTTACTTTTTCTTTAGATTTTGGTTGTAGGAAACCCAGCAAACACTA ACTGTCTGATCGCTTCCAAATGTGCACCAAGTATTCCAAAAGAAAATTTC TCATGTCTCACAAAATTAGATCAAAACAGAGCTATTTCACAGGTAATTTC GTTATCTGGGTTCAAGATTTAGAAGATTATGAAATTTTATTAAAAGCATA ATACGTTAGACAGTTTTTGGGCCGTTCAAAACTTGCTTTATTAAATTTGT TTTGTTACAAAAAAGAAAAAGTATTCTTGCTCTAGAGAATCTATCATCTT AAATGTCTAGAACTACAGGTCTACTGTTTCACCAGAAATAGACTTTATAG AACAATGTTTGATTTCAGGTTGCAATGAGACTCGGTATCAAAACATGTGA CGTCAGCAAGGTTATCATTTGGGGAAACCACTCATCCACACAATACCCTG ATGTTCAACACGGGTTCGTCAATCTGAACGGTCAAGCAGTCCCAATTACT GAGGCTGTTAAAGATGATAATTGGATTCAAGGAGAATTCTTAAGGGTACA TAAGCTGTTCGTTCATATTTTATCTGTCCTCCTAAGACTGCCTAAGACAC AATAGCGAGTTTATGTATTCGAGATAAATCGAGGGGGCGGTACAAAGCAA AGTTGACATGGGGCCGAAATCACCGTCCACTTTGCTCGACGAGGTTAAAA ACACCAAGATACCGTCGTCTGTTAAGGTGAGCAAAAGCGATATAGAGCCG AACATCAACAATCGACTTTGTTTTGTATCGATTTCAACTACCGTCGCCCT CGATATCCTCCGATACATAAACTCGGTAATAAAAGAAACAGAAACTTAAT TCTCCACAATGTCATGATAGAGAAAGTTTATGCATGAAGAGAATTAAAGT GTGATATGAAATCCGATCCTCAAATCACATCTTTAAAAAAACATATTTCA TATGACACATTTAATAATCCTGCATAACTTCCTGTTTTTATAGACTGTTC AAACGCGTGGTGCGGCCATCATAAAAGCGAGAAAATTATCAAGTGCCATG TCCGCTGCGAAAGCCATTTGTGACCACATGCGCGTTTGGTGGTTCGGAAC CGCCGAAGGTGAATACATGAGCATGGGTGTTATCACTGACGGCACACATT ACGGAATCCCTGAAGATATCGTTTATTCTTTCCCACTGACGATCGGTGCG GGCCACAAATACACAATCGTCGATGGTTTAGAAATCAATGCCTTCTCTCG GCAAAAGATGGATCTCTCAGCTAAGGAATTAGTGGAGGAAAGAGATGTCG CGTTAGCGTTCTTGAAAAAGGAATGAGTTAAANACTTGCTTTATTAAATT TGTTTTGTTACAAAAAAGAAAAAGTATTCTTGCTCTAGAGAATCTATCAT CTTAAATGTCTAGAACTACAGGTCTACTGTTTCACCAGAAATAGACTTTA TAGAACAATGTTTGATTTCAGGTTGCAATGAGACTCGGTATCAAAACATG TGACGTCAGCAAGGTTATCATTTGGGGAAACCACTCATCCACACAATACC CTGATGTTCAACACGGGTTCGTCAATCTGAACGGTCAAGCAGTCCCAATT ACTGAGGCTGTTAAAGATGATAATTGGATTCAAGGAGAATTCTTAAGGGT ACATAAGCTGTTCGTTCATATTTTATCTGTCCTCCTAAGACTGCCTAAGA CACAATAGCGAGTTTATGTATTCGAGATAAATCGAGGGGGCGGTACAAAG CAAAGTTGACATGGGGCCGAAATCACCGTCCACTTTGCTCGACGAGGTTA AAAACACCAAGATACCGTCGTCTGTTAAGGTGAGCAAAAGCGATATAGAG CCGAACATCAACAATCGACTTTGTTTTGTATCGATTTCAACTACCGTCGC CCTCGATATCCTCCGATACATAAACTCGGTAATAAAAGAAACAGAAACTT AATTCTCCACAATGTCATGATAGAGAAAGTTTATGCATGAAGAGAATTAA AGTGTGATATGAAATCCGATCCTCAAATCACATCTTTAAAAAAACATATT TCATATGACACATTTAATAATCCTGCATAACTTCCTGTTTTTATAGACTG TTCAAACGCGTGGTGCGGCCATCATAAAAGCGAGAAAATTATCAAGTGCC ATGTCCGCTGCGAAAGCCATTTGTGACCACATGCGCGTTTGGTGGTTCGG AACCGCCGAAGGTGAATACATGAGCATGGGTGTTATCACTGACGGCACAC ATTACGGAATCCCTGAAGATATCGTTTATTCTTTCCCACTGACGATCGGT GCGGGCCACAAATACACAATCGTCGATGGTTTAGAAATCAATGCCTTCTC TCGGCAAAAGATGGATCTCTCAGCTAAGGAATTAGTGGAGGAAAGAGATG TCGCGTTAGCGTTCTTGAAAAAGGAATGAGTTAAANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAAT CGTTTAATCATATTTCTTTTATTGAATTTAAAATAGAAAAACATCTTTTG AATGAACACCTGGCTTTCAAAAGAGAAGAAAGGAAATCTATCAACCTGTT ATAAGGCATTTCTCCTTATCGCTCCTTTTATTTACTTGATTTTTTTCTCT CGCGCCAGATTTAATTCGAGACCCGTGTATTAAAGTGTGATATGAAATCC GATCCTCAAATCACATCTTTAAAAAGACATATTTCATATGACACATTTAA TAATCCTGCATAACTTCCTGTTTTTATAGACTGTTCAAACGCGTGGTGCG GCCATCATAAAAGCGAGAAAATTATCAAGTGCCATGTCCGCTGCGAAAGC CATTTGTGACCACATGCGCGTTTGGTGGTTCGGAACCGCCGAAGGTGAAT ACATGAGCATGGGTGTTATCACTGACGGCACACATTACGGAATCCCTGAA GATATCGTTTATTCTTTCCCACTGACGATCGGTGCGGGCCACAAATACAC AATCGTCGATGGTTTAGAAATCAATGCCTTCTCTCGGCAAAAGATGGATC TCTCAGCTAAGGAATTAGTGGAGGAAAGAGATGTCGCGTTAGCGTTCTTG AAAAAGGAATGAGTTAAAAATGGTAATATGTATAGTTCGGTGGACTTTGT AGTAAACTTCTTTTTAGAAAAAATGAAATCTTTGTCTGCGTAAATTTTTT TGTATTTAGAATTCTTAATGTTGCTCGTTTTTAATACAAATTGACGGTTG TAAAATGCATGCTAAGTTTATGAGATGTACAATGAATATTAAAGTACTAA TAACATAATATCTTCTAATCAAGTTTTGATGGTTAGGTGGTATTACTTAC TAACACTGTTTAAATTTCGTTTACTATAAAATTTGAATTTTATTTATCTA ACGTTATGCATTTTACACCATTGGAATCTTTTTAGTTTTGTAAAGTCTTT ATTTTTAAAATACCTCTGATTAAAAAAATGTGCATAAATAAAATGCTGAT ACAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051023TCONS_00051023Clytia hemisphaericatranscript
TCONS_00051022TCONS_00051022Clytia hemisphaericatranscript
TCONS_00051021TCONS_00051021Clytia hemisphaericatranscript
TCONS_00051020TCONS_00051020Clytia hemisphaericatranscript
TCONS_00051019TCONS_00051019Clytia hemisphaericatranscript
TCONS_00051018TCONS_00051018Clytia hemisphaericatranscript
TCONS_00051017TCONS_00051017Clytia hemisphaericatranscript
TCONS_00051016TCONS_00051016Clytia hemisphaericatranscript
TCONS_00051015TCONS_00051015Clytia hemisphaericatranscript
TCONS_00051014TCONS_00051014Clytia hemisphaericatranscript
TCONS_00051013TCONS_00051013Clytia hemisphaericatranscript
TCONS_00051012TCONS_00051012Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051018-proteinTCONS_00051018-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_192supercontigscaffold_192:45588..54593 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MDH1malate dehydrogenase, cytoplasmic isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
741.02 751.15 402.35 359.4 157.83 127.33 285.57 303.86 377.71 454.9 298.58 320.53 224.02 205.64 362.49 368.71 431.99 397.1 100.26 131.22 223.75 232.02 461.35 439.07 234.74 229.39 372.15 292.79 256.02 254.6