XLOC_032254 (gene) - C. hemisphaerica

Overview
NameXLOC_032254
Unique NameXLOC_032254
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_19:711865..716057+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032254 ID=XLOC_032254|Name=XLOC_032254|organism=Clytia hemisphaerica|type=gene|length=4193bp|location=Sequence derived from alignment at scaffold_19:711865..716057+ (Clytia hemisphaerica)
aaataatttttttcatgaatggTAAAAAGTATTCTGAATGctgaatcaaa
attttgatgcGTGAAAAAAGGCGTCAATAAATATTCAAATCACAACACGT
CCAAAAATTTGCATAATTTATAAAACACACATTTAGTTTTCAATTTAAAA
CCTATCAAGTTACACTACTGGAGAGTAGCGTGTTGTTTTTAAGTACCAGA
CCTCTAGAAAAATCTTTGGCTTATAAAACCAAAAGGTTTTATgatacttg
cttttattcaaaattagattttaattGGATCAGTAGAGAGAGGTGTGTGC
TGAATTGATCaaccaaaaaaatacaaaaattggaaattctTCAGGTAAGG
ATTCGGTTAATATTTTTTCTCCATTAATTCTGCAATCGACTATTTTGGTT
GTTGTATATGCTGGTTTTGAAAATTATGCGGTGAAAATTATGCTACCCTG
GGGCTACCTTCTCCCACCTTTTTCGATAATTTACCACTTGACTGCTATGA
TATTCAGGACGATTTTATAATTGAAACACGCGGTTTAGTATTGGCAGAAA
CTTAATCAAACAAAACAATCTCAGTCTCAGGAGTCTTCAGAATTTTTCCA
GGAAATGctgatttcaaggctttttcttGAACAAGAAGTTAATATAGCAC
TTTAAGATCATTTAAAAAACATCTAATTCTGTTTCTAAAAAGGGATAAAA
AATAAGACTACCGATGATATAAGATAAATATGCAACATGCCTCAGTGACC
CGTCTGGTGCCCATCGCAATTAGCCGGGGAATATATTAAAGAAACCTCAA
TAACCATAAGGTGggtttttcatgaattttcaaaaatttgatctgtttcg
CTAGTTCTCAAGANgcctgtctcagtgacccgtcTGGTGCCCATCGCAAT
TAGCCGGGGAATATATTAAAGAAACCTCAATAACCATAAGGTGggttttt
catgaattttcaaaaatttgatctgtttcgCTAGTTCTCAAGAAATTACG
GTATGGCTgtgttttttttcgcgttgcaAACTTAAAAGTTATTCTTGATC
ATAACTACCTTAAATAATTTGTGTGAGTTTTGAAGAAGCTTAGGTTAAGA
CCATTTTCAGACGTTACGGGTCCGTTCCGTTCCGTTttgaaacgaaacgg
ttccgaaacaaaaTGGTTCCGAAacaaaacggttccgaaacaaaacggtt
ccgaaacaagtgtgaacgtcaaaatttgaaacgtcaaaaaaagaagacgt
tacaaagcaaaacagatcgaaacggttttgctcaacttttttcatcggaa
cggaactgctccatTTTCTTGCTCCGAGACGTTCCAGAACCAGTTAACGA
AACGCATATCGGAGTGAAatggaacagtaacgtgtgaacaggGTCTAAGT
ACTTGTTATGTTATTTTGGTAAGTTTGACGTTAAATGCGGTTTTtcgagg
ccccttgaaaatggaatTTTTCTCAAAGTGGTCTGATGATAAATTTATCG
TAAACAAAAATATCGCTTGTAGTAATCTTTAAGCTAAAACTCATAACGAG
GCGTGGTATACTCTTTGTTGTTGAGATGAGAACCAACCAGCTAGAATTGT
TCGTATCTTGTTCCTATATTTATTAGAATAGCATTTACTGCTTAATACTT
ACTTCAATTCTTACATTCTGAACtcaatagttttttttaattattcattA
TCTATTATTAATTGTTTTAGCCTTTTTAAGACCCATTTTTGAGAGGGCTT
TCACGGTTCTGCCCTTTTAACTCAAAGGAAAGTTTTAATAGAATTGCGGA
ATTCAGGTCCACTGTCGGGGACAGAAGCTTTACATTGTCTGGAATATCGG
AAAAACtccaatttcaaagaaaatttctgtGGTTCAAATTTCGGCTTTCA
TTTTTAGTATGAcggaaatttggaaagaaaataacGATATGGCAGAATTA
GGAAGCCCCTGCAACCTCACTGCTCCTACAACAAAActagaaatatattt
ttctttgtttttagcgTTTTGGCAATGTTCTTATGAAGTTGCTCTCATAA
AGTTGTAAACTTTTTTCTGGGTCATTTTGTGTGGAAACCAGGGCATTGCA
AACATTACAGCTCCCTTTCAGAGTGGTTTTCACATGGTGTAAGAAAGAGT
GTTTCTTCATCGTTCTTGTAACGTTAGAAACGATTAATGGACGTTTCCCC
GACGGACATTTCCCCGACGGTCATAGTCGGGGAAACGTCCGTTCGGGGAA
AAGTCCATCGGGGAAATGTCTGGCCGGGAAAAcgttcgtcggggaaaaat
ctGTCGGGGAAACGTCCGGTCACCTTAAAAACTTAACTTTCTTATTTCTA
ATAGGCTAATGCAAAGATGAGGAATCTTTGTCTTCTGGTTTTCTGCTTTT
GCAGTGCTACCTATGTGTCGGCCGCCGACCAATCGCCAAACAGTGATGAC
GTTTGGATAGTTGCCGAAACGGAACCGACACTACTGAGTCCAATAATTAA
ATATAAAAGGGTGACGAAGTCAACAATTGAAGCTTGTTTACCAAGTCCAC
CCGAATGGGAAACTACCAAATGGGTCCAACACAAAACACAattcaacaaa
aagaaaatcaggAAGGATCAAAAATCATTGTTGTGGAAATTGTGGAAACA
AATTGAATTGTATTTAGTGAAAGCAATCAACAAAAAGCATAAAGaatatg
aaaaagtgaaaaatcttttcacTTATACTGTTACTGAAGTCAGTGGTGAC
AATATTATCCTGACTATCTATTTCAAGGTACCGGATAAAATGAATGACGA
TGATTTTGATTTGACGTGTGATCAGATTACTGGTGTCGACAGAGAATCGG
ATAggcaatcaaaatcaaaaaaatgtgCATTGGTTGTCGGAATCACGGAA
TCAAAATGCTTTGTCAGTACCAGGAAAAGACGCATCAGCAAGAGGTTCTC
CATTGCAACGTTGAAGAAACGTTATTTTACAACTTCTGGAAACAACGGTG
TCAGATCTGGTAAGCGTGGTATGCCTATGGGAAAACAAGCTAAATtccaa
atcaaattttttgaagaaagtGATTGCTCTTGCAtcgaataattttttta
aaaaacattgtaAAATTTACATCAAGAacaccctgtgtcacagacacttg
aaaattgacttttttcaTCCCTACGCGAAATTCAATATTTAGAAATTGCA
CTTTAAAACCATTCCCACTAGATTTTTTAATATTggaaatagaatttcta
tcttcattgggatttcaataggaatttttatcccgactgaggaaaaaagt
actaccggggctgtgagacaggggtgttcaatACAATTTTGAAAGTTATT
TACTTTCGGAACGATTTTACCACCTTTTTGTATAATGTAGTTATATGTAA
TACTCATTGCtatttttatttgttgtttttttttagtaaTTCCTTATGGT
TTTCTCAGTTAGGCCTGATTTAGATTTAAGAACTGAAAGACGGAATTTCT
TAAATGTGttccattatttttttgttttgatagagAATGGGGCCTATTCT
TCTACTATTTATACAAAGCGTGTACAGCCACACTGTACTTTAGCTGTGAG
CAAAAGATTCCGATCCGATTCTAAATGTGTTAGAAGttattaaagtctgt
tcacgataagtgtgcactcttttttcatgtaCATATAACTTTctaaggaa
ttcttcaatctttataaatttggtatcgttagaGAGATaattgtgagtgg
aacaatttgaaataaaaaagtctttaaaaatgttctaaaaacgaagatga
aaataaagaagaaaaaaataaagatcttgtagaaaagtgctataactttt
attttcgtgaatagactttagtatgATTTTCATTGGTGTGAATGAAGAGT
GCTCTTATGAACAGAAGAATTTAATGACGTCCCTACATTACATTTAGGTA
AATTCAGGCGCATACTTTTTCCAGATAtcgattttaaaatatttaaatat
ctTGCTTTTTTTGTAATCACATGCATTTTTGGCAAAGGCCATCATTCTTT
TTATAGGTTTTGTAAATATTTAGAAATTCTTTAAACTTgtgttgtttttg
aaaatatataaacgTTGATGTTATTAGCACTCTTAAAAGGTCATGGTTTC
AAACCATCCCATACTGTGTGttttgatatcatgttcaaagtTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050890TCONS_00050890Clytia hemisphaericatranscript
TCONS_00050891TCONS_00050891Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050891-proteinTCONS_00050891-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:711865..716057 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.1	0.11	0.12	0.09	0.09	0.14	0.37	4.23	1.42	1.93	2.36	20.77	19.96	39.01	46.13	13.08	16.52	0.84	1.41	41.65	38.98	16.4	21.3	20.6	23.01	2.97	2.15	5.37	7.45