XLOC_031970 (gene) - C. hemisphaerica

Overview
NameXLOC_031970
Unique NameXLOC_031970
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_173:40466..45962-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031970 ID=XLOC_031970|Name=XLOC_031970|organism=Clytia hemisphaerica|type=gene|length=5497bp|location=Sequence derived from alignment at scaffold_173:40466..45962- (Clytia hemisphaerica)
ACAGTGAAAATCACGAATTATGGACATCCTATCACTCAACGTCAAGGCTC CATACACACGACCGACAGAATCTGCAGTCATTTTCAACAATCTTACAAAC TTAATACCAAATATAAACGATAACGTCAAACGATTTTTGAAAAACCAATC CGGAAAATTACCTGTCCGGCGTCACTCATCTGCGGAACTAAAATTTTCCG ATGAAGTTCCGTTAATTGAAGTTACACCCCCTTCGCCTGGATGCTCACGG AAAACTACTTTCGATATCGAATTCAATAAAGTTATATTAGATACTCTTGA CGTATGTAAGAGAAAAATCAGACGGTTTTCTGAACCATGTCTTTCAAGCC AACTCAATCTCGCTCATTTAGAACAACACGCGGAAAAATCTCGCCGTAGA TCAATGCCGTGTATATCAAGTAAACATTTATTGAAAGTTCCAAAACCGAC CAAGAACAAGAAACATAAACGGAGATTGAGTTTGCCGATTAAACCGAGTC AATCCGAGTTACCCGCCGATTTTTGTCCGTTAGAAAAAAGTTTGTCCGGT AGCTATGAGAGGATACATTATCAACTAAGTCATGACGGTGGTCCGCCCAA AACTGTTCACGAGATATTCATACCGGGTTTCGGAATTAACAGAGATGGCT CAGATCCGGATATGGAGGATAACGGAACGACGGAGAAACATCGGAATAAT AAGTCTGAACATCTCACAAATTTGGAAACCGGAAACATGGTGTCAAAGAA TGGCAATCGAAAATCGGTAAAGGTTTGTCATCCCGATTTATCACAGACAA TTCCAGAAGAAAATTTGGTATTTGCTGGTGATAAATATACAAAACATCAA AATACCTATCATTCAAAAAATCGGAATATCAAATCGGAAAATCGGGATGC TAAATCAGCAAATCGGAATTCGAAATCGGGAAATTCATCACCTGAACCGC AGGTCACGTCTTGTTCTGATTTGTTAATTGTAGCTAATAGAGATCTTAAC AAGTTGTCTAAGAGACAAAATAGCGGCACAAACTCTACTATAAAGGAACT AAACTTCATTCACGATTCACTTCTTAATAACATTAATGGGCTTATAAATG ACGACATCGTGTTGAAAGGACATATCATTAATAAAAAATCTACAACAAGT CCAAATTTGTCTCGCCCAGTCCGTCCATTTAAACAGGAAAACAAGAGTAT AGATTTGGTTGATGGAGGCATAAACGGAATGTCTTTATGTGAGAATAGAC GCTCTTTGTCTCGATCATCACAAACATTGGAGAAGGAAAGGGAAACTATG GATTTGGATAACAGAGCCACAACTCAAAATAAGAGGTTAGTGAACTCTAT AGAACAGTATGACATCATGAATAATGAATTGAACTCTTTCTTGTGAGAAC AATATTTCATAAGAACACGAGGCTTAATTTCGGTCAAAACCTAAGAACAA TTACCAACAATACCAACTTCAGATTTCAGAAATGGCTAAGAAAATATTAT TTATTCAGGATTCAATCCCTTTTAAAACCAAAAAGCGAATGAAATTAGCA TATTAAGAACATAATATGAAAACTAAGAACAGCCGAACCTTGACCAAAAT ATTACCTGTTCTTATAAAAAGTAAGCCTATTTTATCAATGACAAAAATGA TGAATTTTTATCATCATTATCAGAGAAATTTATAAGAGGAACACTCCCCT TTATGTTTTTTTTAAAAAAACGTGATAACAAAACCTCAAATAAAACTTAC AAGAAATATAAGACGACGGTTTGTAGTATTTTAGACCAGATCATATGACA AAGTGTCTTACCAAAGAATAAACAACACTTTTGAATTTTTGTTTAGATAG CGATCGCAAACAAAGAAAGAAGGCACTGCCAATAACAAACTTGAGTCCTC CTTTATATACTTCAATATTGACATCATCGTCAGAAAGAGAGGATATACAA TTGAAAACAGACGAACAAAAAACTGTTTTAAAAGTAGACGAGTCGAATTT GAAGGAAAGAGGTGCAAACAGCCGTAACGAAAATCAACAACGAGGACGTG TTAATTTGCGAAAGACTTTAACCGTTGAAAAAACTTTTATTGAATCGCTT TTATTAAAAAACGGTTTTGGTTTTCAAGACGAGAAGAAAATTTTAACTGC TAACACTGAGTTGAGAAACTGTTTTGTTNTGGAATGTCTTTATGTGAGAA TAGACGCTCTTTGTCTCGATCATCACAAACATTGGAGAAGGAAAGGAAAA CTATGGATTTGGATAACAGAGCCACAACTCAAAATAAGAGGTTAGTGAAC TCTATAGAACAGTATGACATCATGAATAATGAATTGAACTCTTTCTTGTG AGAACAATATTTCATAAGAACACGAGGCTTAATTTCGGTCAAAACCTAAG AACAATTAACAACAATACCAACTTCAGATTTCAGAAATGGCTAAGAAAAT ATTATTTATTCAGGATTCAATCCCTTTTAAAACCAAAAAGCGAATGAAAT TAGCATATTAAGAACATAATATGAAAACTAAGAACAGCCGAACCTCGGCC AAAATATTACCTGTTCTTATAAAAAGTAAGCCTATTTTATCAATGACAAA AATGATGAATTTTTATCATCATTATCAGAGAAATTTATAAGAGGAACACT CCCCTTTATGTTTTTAAAAAACGTGATAAAAAAACCTCAAACAAAACTTA CAAGAAATATAAGACGACGGTTTGTAGTATTTTAGACCAGATCATATGAC AAAGTGTCTTACCAAAGAATAAACAACACTTTTGAATTTTTGTTTAGATA GCGATCGCAAACAAAGAAAGAAGGCACTGCCAATAACAAACTTGAGTCCT CCTTTATATACTTCAATATTGACATCATCGTCAGAAAGAGAGGATATACA ATTGAAAACAGACGAACAAAAAACTGTTTTAAAAGTAGACGAGTCGAATT TGAAGGAAAGAGGTGCAAACAGCCGTAACGAAAATCAACAACGAGGACGT GTTAATTTGCGAAAGACTTTAACCGTTGAAAAAACTTTTATTGAATCGCT TTTATTAAAAAACGGTTTTGGTTTTCAAGACGAGAAGAAAATTTTAGCTG CTAACACTGAGTTGAGAAACTGTTTTGTTGGAGCAGATTTGTCGACAAAC TTGAAAATCATAAAAGATTCTAAGCTGGTAGAAGTCTTAGTTGATCGATA TTCAAGCGCAAGTAGGGATCTAAAGTGTAGGAAATATTTTGAAGCGAGTA TCGTAAGAGCAATCGAAGGAAAGGAATCAAGAAATTCTGCTGGAAAGGAC AAAATTTGTAATAAAGCTAACGACTGCTCTAATTATTTGAATGGTAATCA AAATTTTGTCACTTTAAACTTAATTAGCGATAAACTGAAATCAGACGAAT TTGATTGTCCTGCATTGTTCGAAGGTTCGCAAGAACACTACAATAAGGAC CATTATAAAGACCATTATAGCTTTAATTGCAAATTGGATGATTTTCACGT CTCAAAGAGTCATAAACCGACTTTAGATTCTTTTGAAAACGATTTCTTCT CAAGGGATATCAAAACAAACAAAAGTCATTACATGACGGATACTCTCAAA GTAATTAGCGTAATTAAAAATAACGAGCAGGTTGTAGGAACAATGAAATC TACCATTTTTTATTCAAATAATGATGAACTTTGTATTGGTAATAATGAAC AGTTAATATGTGTATGTTCTGATGTCGAGGAAAAGCAGTTAGGTGAAGTG GTTGTTGAAAAAGACGAAACTGAATTCTCGAATACAAATAACGAAGAATT ATTAAATTTTGAACAAGATTCTGAGATGGGTCCAACACGTCATTTTTCTG ATATTATTTCAGATGTTCTATCGGGCAAAAATCCTGACGTGACGTCAAAT TTTATTATGTCTTTTAACGGACTCGGAGATAACGGGAAAGTTGTGTATGA TGCAAAAAGCGAAGATTGTAATGTTTTTGTTGACACTAAAACTGAACGCT CGCTCTCCTCAGATAGCTCTGAGGCTGAACTTGATGATACTCAACAACAA ACTGATGAGAATGGGAAAATAGCTTTAATGAAGTCTACTAGTCTAACTGG TTTGGATGTTTTCGTTAAGAAAAGACCACAGCTGCAGAATGATAACAGGC CTGTTTCATTGCATGGAGATCAGAATTTGATTGATGCTCTATCTGGTTCG ACCAATGAGAATACAGGAACCAAGTCACGTGATGACAATAAACCGACCTC TAAATCATTGGAAGAGCTTGACGGTGGTGACAATCGACCGAATGTAAACC GCGTGTCAGCGTTGAATCGATTGAACAAAGATTTCGCGAACGCGATGATG CGAAAAGCTGTTTCGTTAGTCGAGATACAAAACGAAAAACTGAAAGAGAA TGTTGCGAAATGGGAGAAAAAGTTTTTATCAACTGAAGTTTTGAGTGCAC CTGATAAAGACTGGTTCCCGCGCGTCTCAATGGAAGATTGCTCTTCGTGT GCTTCTTGTCGCTCAAGATCGTCAAGCTATCATAATTTGTTATACGATTT CGATACTGCATCACAGTTTCCTATCTACCAACCGACTGTTATTGATTTTG AAGAAGACCCGGAAACTATTTTTGATGGAGTACAGTCTAGTCCACCTGAC GGTGAAATAACACTAAATGGTTCACAGTCTAGTTCGAGCTCTACTGAACG AATCGAGGATATAAACGAGGAAAATGAACTCGAGAAAACTGTAACGAACG ATAAAATCGATGTTAAAATTGAGGAACCCGAAGAGGATGCTAAAACGAAA ATGATGAAACTTCTAAAGAAGGAACGATTTGTCAAACAAAGTCAAGCAGC TTTTGGAAGCTTGAAAGATAAATTTCGTAAAGTTAAAGGAAAAGTGTAAA TATGGCTTTATATTTTAATTTGTGTTTTTTGGAAATCTAAAGGGCACTAT AACTTTTTCGCAAAAAAATGGGAATTTCCATAGAAAATGTCAATGTTTTA AAAACATCTGAAGAGGTTCAAAGTTCGGGACCCAATTTTGCATACCTTCG CAGGTCCTACCCCATTGTCATTGTCATTATTGTTAAGTAACGATTCTGCT CTTATTCCATTTTAATGACTGCCAAGATTACATGCCCGGATATTTCAAGT ACTAGGTACTATAGAATTACTACTTCCGTTACTCTGGGCGAGCTTTATCC TGAACTCTTTTAAAGAATGGGCGTTTATGTAATGTATCTAAGGAAATTTT AAGTAAATCAATTTGAATGTATGTGTTACATTTTTGGATTAAGTGATTGA AGGATTTTGATCGCCCCTTGTGTTACTTTGAAAACTTAGGCTTAGTGTTG TCATTTCTTCAGTTTTTTACGATATATGTTTTAAACAATAGATTTTAATA AAAGTTACATATACACTACCATATATTATTGTATTATATAATGTCTGAAT TTTATCATTATCCTATTACATTGTAAATGTTTTAAAAACGATAATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050487TCONS_00050487Clytia hemisphaericatranscript
TCONS_00050486TCONS_00050486Clytia hemisphaericatranscript
TCONS_00050485TCONS_00050485Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050485-proteinTCONS_00050485-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_173supercontigscaffold_173:40466..45962 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.32 3.2 1.32 1.17 13.68 10.31 21.12 24.11 11.09 23.99 11.43 10.67 5.61 4.49 5.41 6.29 5.38 7 9.46 10.77 5.33 6.76 4.26 5.37 5.96 5.64 25.71 22.73 21.6 18.65