XLOC_031230 (gene) - C. hemisphaerica

Overview
NameXLOC_031230
Unique NameXLOC_031230
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_153:129457..138118+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031230 ID=XLOC_031230|Name=XLOC_031230|organism=Clytia hemisphaerica|type=gene|length=8662bp|location=Sequence derived from alignment at scaffold_153:129457..138118+ (Clytia hemisphaerica)
ttttcAGCTCAATTCAGCAAATATGGCAATGCAAAGAGGTATACCCAATC AACAACCTAGATTCCCTGGCATGATGAATCAAAAACTACCTGGCATGCAA ATGCCAAATCAAATGCAACAACATCGACCAAATATGATCAATAGAATGAA CAACCCTGCAATGTTTGCAAATTCTGGCCAAACCATGCAGATGAACCAGC AGTTGCAACAACATAATCAAAACCAAAATTTGCCTcagcagcaacaacaa caactgtCTCAAAATCAGAACAACCAATTTCAATCACAACCAAACCAACA GCCTGTGAACAACTTTCAAATGAATCAACAACCAAACTCTATGAACAATT TACCTTCTCAAAACTTACCGACAAGTCTCTCTAACCCTGTCAAAGTGGAA GATCAAGTAATGAGCTCGTGTATTCCAACTAGTAGTACTGACCAAATTTC CACGCAACCATCGTCTACTCCTTCAACTCTCACTTCTTCAGCTTTAGGCT TGCAAACTCCTAAAACTGAAACATCCCTATTATCTTGTAATTCAAACGTG AAAACGGAACCACCATCTCCCATGCAAACTTCAACAGAAGATGTTAAACC GGACATCAAAACTGAAGTGAAAATGGAAATATCAGAAAGCACTTCTACAT CAACAACTACTGCAACAACATCAGCCACTGTTTCTTCTTCAAGTGCTGTC GTAAAGACTGAAGCATCAGGATCCCCTGCCACTGTCAAAACTGAAGTCAA GCCAAAAGTCTATAAAAGTAAGTTAAAGGCTATAGTTACTTTCCTTGCTG ACTCATtaatttttaagtatttttatcCAAAACAATCTACTTTTGCATGT TTTaaaccattttttgaaattctcacaTTAGTATGGACAAAGGAGGAATT GATTGAAAGTTTGATGCCAGTCTTTGATAAAGTTCACAAAATAGATCCAG AATCTGGACCTTTCTTAACTCCCGTCAACCCAGACCAACTAGGAATTCCA GTAAGTATAATTATAAACgtttttcaaaaagcattttatTCTATTCCTTA GTCtttgaatccaaaaaaaattgattatttattATAGGCCCTTACCAAAT TCCTTTACCTCACTTTATTAGGATTACTTTCACATTGTCAAGAATCCAAT GGATTTGTCAACAATCAAAAGTAAATTGGACAATGGTGACTACAAGGATC CCTGGGGTGTAAGTATACTGAATTTGTTCATTCCGTTAGTGGacgaaaaa tagtgtttttaaCTGTGATGTTATTTTTGATCTAATATTTGATTCATCAA TATCGAAAATCAATTTGCAATATGAGTTTCTAACctttcaattttcaatc ttCTTAGTTTTGCGATGACATGAGGTTAATGTTTGAAAATGCTTGGTTAT ACAACAAGAAGACAACGAAAGTTTATAAATACTGTTCAAAAGTAAGACCT TTTATCtacactttaatgaaaatttttgtgtgattatATTATTTCTTTGC CCCATgaaataccgggtgacccacgaaaaagttcagacgtttcccgacgt cttgaggccgaacaaatgtcccaaagtgcttggagttttgatatttagaa attagatatcctaacttaaaatttgagctatcactttttaaatttgacca acttgttctctgcctatgagcttttaaagtcaaaattcactttacggaaa gtcaaaattcattttacggaaagtcaaaattcactttacggaaagtgtaa aaaacatctaaaaatagggtatcaaatttggtatttttagacgtttttga tatacagtttttgaaaaaatctatgaaagcgccaatttttatataaacta gtcttattttaaacaaaaattactttcaaaggtgtttttattgattatta ATGTCATCAAACTctttaaataagtcaatttgtaagtgattttctaattg attgcatgaatttaatacctcttttttacatgttttttacacttttcgaa aagtgaattttgactttaaaagctcataagtagagaacatgttggtcaaa tttaaaaagtgatggctcaaattttaagttaggatatctactttctaaat atcaaaactccaagcactttgggacattttttcggcctcaagacgtcggg aaacatctgaactttttcgtgggtcacccggtactaATACTGAAGGTGAC ATAAACGACCTAAAAACATTGGCTTTTTTTTAGCTTTATGATATATTTGA AGCTGACATTGATCCAGTGATGAAGAAACTTGGTTACTGTTGTGGTAGTA AGGTATGGTTTCGTTTTGCTTCCTCTTGTTATTAAGCATCTTTCAGTTAA ACAAATAACTTAGAATTTGAATATCACGTCCAaattctaaaatgacagat agtATTCATTTATATCCCTATCGAGAGTAACTGTTCAGTTCATATGTAAA AGGAACTTTTTACTTGGCTTGGTTTCAATAaagtttttaatgttttcaac aTTATCAACTTGTGTTACATAGTTAATTAATAGATTAATTTCTCTGTTTT AGCATCTTTTCAATCCTCAAGTTTTGTATTGTCTTGGTCAAAATGGTTCA TGTACAATTGGTCGAGATAAACAATACTATTCCTACCAAGACAGGTAACT TGAAATATTCATAAGGTTCTTAAAACCATTCAACAAATAAGTTGTGTTAA GAATTGTTTGCTTTTTCTTGCTCATTGGAATCTTTTGATGgctaaaatat tcaaattttgttttcacaGGTATCACTATTGTGAAAATTGTTTCAACGCC TTCGAAGGTGATTCCATCAATTTTGGTGAAGACACAATATTAGAAAAAAC GTCCAATAATAGCAACNGCtaaaacattcaaattttgttttcacaGGTAT CACTATTGTGAAAATTGTTTCAACGCCTTCGAAGGTGATTCCATCAATTT TGGTGAAGACACAATATTAGAAAAAACGTCCAATAATAGCAACGTGCCTA AAAGTGActtcaaaaagaagaagaatgaTCATCTGGATAAAGAACCGTAA GTCTTACTCCTTGATAATATTTTGTATTATTCTGTATTCATCCAAACAAT ATCGGCGCTAGATTGAAGTTCTATTGATGCAAATGTCGATTGATTATTAT ACCAACCcttatttcaaatttacctTTGCTAACTTTGTAGGTTTGTAGAG TGTACTGAGTGCAAGAGGAAGATGCATCAAGTTTGCGTTCTTCATTTGGA TTTTATTTGGGAAAATGGGTAAGTATTTTGCTTCTACGCTTATCATttta tttgtcataatttttcaGTTCAAAATGAATACTTGATCAGGTTATTGATT TAAAACATGATTGAAGATTTGATTTCTCATAGTTGTTTTtatgtgttttc attttatagGTTTGTTTGTGACGGGTGTAGAGAATCTAAAAGTTTGGGTG AACGAAAAGAAAATCGGTTCAATGCAAAGAGGTTACCGCAAACCAAGTTG GGTGAACACATCGAAAAACGGGTTAATGGCTATCTGAAAACCGCTGAAAA TAGTGATACTGCTGGTTATGTACACATTCGAGTTGTCAGTAGCCAAAATA AAAGTGTCGATGTTCGTCCTGGAATGCGCGATCGCTATTCAAAGGAAGGT TTTCCCGAAAGCTTTCCATACCGAGCCAGAGCATTGTTTgcttttgaaga aattgatgGAGTTGATGTCTGTTTCTTTGGAATGCATACTCAAGAATTTG GGTCTGATTGTCCTGAACCAAATAGGAACCGAATCTACCTCTCATATCTT GATAGTGTTCATTTCTTTCGCCCACGTCACCTCAAAACTAATGTCTACTg ggaaattttgattggttactTTGAATTCTGCAAAAAAAGAGGGTAAGTTC AAATTTATTctcaataaactttcaataCCCGCTGCATcttaaaattaata ttttttaacaagttttttgTTAAGcatcaaatttcatattttatgcatgt taatttaaatattttgcatCATTTCCGTCTTTTTCTTAGGTTTCATTGGG CACACATCTGGTCATGTCCACCCAGTGAGGGCGATGATTACATCTTCCAT TGTCATCCGCCTGAGCAGAAGATTCCCAAATCCAAACGGTTGGTCGAATG GTATAAGCGGATGTTGGAGAAATCAGAAAAGGACGACGTTCTCGTGGAAT ATAAAGTAAGCCTATCTGCTTTGATGAACTATTGGAATCACTGAAATcga ctgaaaatttattttttgtttatcattCTTAATAACAATAtttggatttt gattttttttgcaggaCATCTACACACAAGCTATCAACGACTTGGTCAAA AGCCCTTTAAACTTACCATATTTCGATGGTGATTATTGGCCCAATCAAAT CGAGGATAGTATTCGTGAGGTGATAAACGAAGAAGAAGAACGGAAGAAAA ACGAAGCTCTCCAAGCTGCTCAGTTAGCTGAAGCTGAAAATGACGAGGAA GTTGCCTCTGAAGATATGGTATGCCCAATATTTTAGACAGTTTCCTTTCA AATCGCActgtaaattttagttaatagttgttctattttgatttttgtga ataATTGTTGTTCTTTATTTGTAGGTTGTTACATCGACTGGTAAAAAGAC CAAAGGCAAACGTGGAAACAAAAAGACTACGAAGAAAAACAAGCTCAACA AAACCCCAGCTAAGAAGAACGTTACAAATAATTGGGGAAGCTGTGAAGTT TCTCAACGTATTTTCACCATCATGGAAAAATACAAGGAGGTTCGTAACTT TTTTTAATACAATTCTCAAATGATCTTACTCCAAATGCATCACTAGCTCA GTGGTTTTATTATACTATTTGATAAGAATTTGTGAAGTCAACTTAAGCTA CAACTACACCAAATAATTATTTCTAATGTCTATTCGTTACCTTTTTCAAT TCACTCTTTTGACGATATAtctctctttctttctttataaCAGTCTTTCT TCGTTATTCGATTTTACAAACCTGGAGAAGAGCCAACGGACAAAATTGAG GATCCTGATCCATTGATGCAGAGTGACATCATGGACGGCCGAGACGCTTT TCTCACAACATCGAGAGACAAACATTGGGAGTTTGCCAGTCTGCGTCGAG CCAAATTCTCAAGTATGGCTATGCTGGCTGAACTTCATAACCAAGGATCT GACAAATTCGTCTATAACTGTAACGTTTGTAAACGTCAAATCATCACGAG ACTTCATTGTACTGTTTGTGAGGTACGTTTGCTTCCTAAGTTTTTCATTC TAGGGATTTAAGACGTCGTACATGATCCATGATCAACCAATGACTATAAA TTGATTGTTATTAttttaaaatgtcttttcaGGATTTCGACCTGTGTACA ATTTGCTACAAGGACAAAGGTCACGAGCATAAAATGGAGAAACTCGGTCT GGATATTGAAACTGAACAACCAAATAGCGCCAACAAAACAAGCGCCATCA ACGCCCAAGAAGCTCGACGTAAATCAATCGAACGATGTATCGAATCCTTG GACCATGCAACATATTGTAACGCGAAAACGTGCAATAAGCAAGCGTGCTT GAAGATGAAGAAAGTCGTTTCCCACGCCAAAAATTGCAAAAGGAAAACGA CTCAAGGATGTCCCATTTGCAAGCAGCTCATTGCGTTGTGTTGTTATCAC GCCAAATCGTGCACGCGTTCTCAGTGTCTGGTTCCTTACTGTCAACACAT CAAACAGAAATTGAAGCAACAACAATTGCAACAAAAACTTCACCAACGTC AAATCTTACGTCGTCGTATCGCTACAATGAACATGCCATCACAAGCACAG CAACAGGCTCAAGCTGCACAGAAACAAGCACAACAACAAGCGCAAAAACA GCAACAGGCTCAGCAACAANAACAAAAACTTCACCAACGTCAAATCTTAC GTCGTCGTATCGCTACAATGAACATGCCATCACAAGCACAGCAACAGGCT CAAGCTGCACAGCAACAAGCACAACAACAAGCGCAAAAACAGCAACAGGC TCAGCAACAGCAGCAACAATCCATGCAACAAAACTCCCAAAATTCTTCCA CTATGAATTTCAACCCTGCACAACAACGACCCATGGGAACACCACCTAtg caaatcaaacaaaaaccgaTCAACATGACCTCCATTTCAGGTACCCCTCC ACCACCCAACGTCACTGCTAAACCACCACCACCGGTGGTCGCACCGCAAC AAACAAACGATATCAACAACCGTAATATGAACATGATGAATCCAAACCAA CCACAACAACCGCGATTCGCTGGACCAAATAATTTCCCCAACAATAATAA CATGCAACAAAATAACATGATGAATgtacagcaacaacaacaaaaccagA ACAATAGCATGATGAATAATATGAACAATTTCAATCAACAACAAATGAAC GTTCCGCCCAACATGAGCACAAACCAAATGATACCACAACAAAACCCTCA GAACCCTGGTATGATGATGAACCCTAATATGAACACTAATAGCCAAGTCC CCATGCAACAGTTATTCAACGCAATACAAAATCGTGCTGGTCCGCGCGGT CCTTTCCATCGTTACGGGATGCCTCCGAAGCGTCCAATGGGAATGCCAAT GTCGTCTTTACAACAACAGAAATGGCTTCAACAACTTCGTTtccaacaac aacagcaacagcaGCAACAATACCGACAGCGGATGGCTCTTGCTGCTAAT ATGAACAATGTTAATATGAACCAAATGAGTGGGCCTGGTTTTAACAACCA GATGACGCCCAACCAACAAATGAACCCTGCTCTTATGGGAATGAATAGAC AGTTTTCAAATGACGCCATGTTACCGCCTGGTCAGAACATGGTTCCGAAC AACAACCAAACCACACCACAAATGATGGCTGCTGCAGCGAACAACAATCG tgtcaatcaaggcatgaaccAAATGATGAACCAAGCAGGAATCATGTCAC CTCCGCAACAGCAACAGATGGCCAATCAAATGTCGAACCCTTCACCACGT CCTTCGATGTCGCCTTCACCGAACCTGCGAGCGCCTTCACCTCATCCCGT CATGTCTCCTCAGCAACAAGCACAACAACAACACATGTCACCTTCTCCCG CTCAACCGCTATCCAATCAACCCTTAACTTCGCCTGCTATGCATTCCATC AATTCACCGGCACAACAAGCTAACACACCAAACATGGACCCTTCTTCCAA TTTACAACCGTCCTCCGTTAAATCGGAGATGCCGGGGAGCAACATGTCAC AACATCAAATGCTTGATAATAATCCTGTTAATGAACAAGATGATATTTTA CTGCAGTTTGCTGAGTCGCTATGATATATCGCTTCTCTGTATTCTTTAGT TTTGCTATCTTCTATCGCCAAAAACGAAAACAGATCATGTCATTGGCCGC TTTTACTTACACAATAGCTCAAACGAAATAAAattatttatacttttttg gAACTATTTATTCGCGTAAGAGCTGCCTGACTTATATcgattttttatga ttctgaagGGAAGGGGTACCTGCCTAGttgtgttattttttcaaacgaGA CTAGCTAGTGCCTATCACACACGCTTGTCCGCCCACATTGTGTTTTGTTG GTAGTCTCTAGAATGGCCTAATGAAGATTTCGCATTCACGTAAGGCTCAT TATTACACTTCCCTTTCAAGACCGTCAAACAAATTgccatttttatattt tcgaaTCCTCCATCATTTGTGTAAagggtttgtttttaaaagatattgta ttattgttattattatgaaAAGAGTATCTCAGAGGTCAAGACATAGTTTG GTCGTAGAATTGCCTCTTTTATTATAGTCCTCCAGGAGGAAAGTTTTCAA ATTACTCCGTAACTTTTCGTGGAGAGAAATTACTTTTGAACCACGAATAG AAATTGTATTATATACTGTTATGGAAAAAGAAGTCTTTAGTATTAATAAT ATTATATTTACTACTACAATGGAAGCATTATTAACCATAGATTTTGTATT GAGAACGACCAAGAAATTTTAGCCTAGTTTTTAagatcactttttttttg ttttcatcataATTGTTTATTACATCTTGCTTAtcagtaaaattattttt ttgtcaacatttttttcttcaactttaaattaataaaacttcattttttg taaaaagagaAATTTATTCAGGCCATTAAATTTTTAACACGGAAAATTGA AATACAATTTGGAGGTAACTTTCCAACGGTCCTTAACCCCTTTTCCAGTC ATGTTACTGTTATTTTTTATATCTGTACAGATAAAATCAATAATATTTAA AATGTCGTCGAAATTTCATCATTGTCGCTGTCGATTTTGTGTGAAGTCAG TAATAATATTCATTAAGTCCGTAAGaaatcgtaagaatattttggaaaaa agctTCTTTTAGATTGCTTTTTTTTTTAGTTATCTCTACAATATAAATTA AATTTAATTTTTGATCATATCTTGTACTTAAAGGAATTCTTTTTGCGTTT TGGTACTTTTTATTTTTTACGAATCATGTCCGAATTTTATTGGGATATTT TGTGAATAATATCGATGCTTGCTACAATTATCAACTAAAGATATCGTAAA ATTTTAGTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049142TCONS_00049142Clytia hemisphaericatranscript
TCONS_00049143TCONS_00049143Clytia hemisphaericatranscript
TCONS_00049144TCONS_00049144Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049142-proteinTCONS_00049142-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_153supercontigscaffold_153:129457..138118 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.83 6.89 14.23 18.49 88.18 65.52 43.23 51.42 24.32 31.81 31.23 27.87 31.18 33.95 21.73 27.92 26.99 31.15 29.3 31.25 34.4 33.51 18.38 25.63 30.67 31.39 44.98 43.01 39.84 35.55