XLOC_031213 (gene) - C. hemisphaerica

Overview
NameXLOC_031213
Unique NameXLOC_031213
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_152:96315..102139+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031213 ID=XLOC_031213|Name=XLOC_031213|organism=Clytia hemisphaerica|type=gene|length=5825bp|location=Sequence derived from alignment at scaffold_152:96315..102139+ (Clytia hemisphaerica)
ccattgatgatccacGGCACTAtcataaagctagaatcgcttcgcgtact cttcgcttgagaaaatgattgacagattgaagtttttcatcccagtggtg cgcgccgcgcgggagcttgggcgctctgcgagagttcccggctcaatcct cggaccgcgctaaaaatggtagactgagctgtgatagatcattttgatgg aagttgttggaatgtttataaggctcttgacagaatattgtttgttttat tgtcaataatgatgacagtgccgttataaattttgttagatctgacaaat tgatgtttgtaagtgcactttatagttttgattcccattgaagaatcata ttctggttttcatgttattagatgctgttttagagctttagagctacact gtaGAGTTTAGGACCCTGGCCCCGGGTACCGGTAAGGTAagtattgtttt gattggaagtgcgcgGAACTTCAGACTCAAGTTAATTTTACTCAATCAAG AATTATGGGTTTAATAAACAGATATTATACTTACCAATATATAATgaaat caaattctttttggtagatttttgacagaaaaaaaaGGAGGGAGAAGCAA AAAGTGATCCACGATAAAAATTTCCGAGCACACTGTTTACATcttttcgc gccaaaataccGAGTACCGGCTGACATAACATAAGCGGAATAGTCCGATT TAACCGGAAATCTAGATGCGAGTAAAGGCTAGCAAGTGGTACACAGGCTa gttttgttatgattttttttgaatgaaaacgaaagtgctgaACTCGGCGA GAATTTGACGAGGGAACCTTCCCTTGAGTAATCTTTGAGATTACAAACAA ATTTGTTACCTAATCGACACAATTTTAGACGAATTTTTGCTGACTTGGCT TTCAAAACTATTTTGAGAATTTGTAGTTTAAGCACCTTTTAACATATATA ATATGAACCATTGCTTTTAAGTTTGCAAGTCAAAGTGCATCACTAAATAA ACTTTACTACATACAGATAGATCAAAATCAAGTCATCCTCAGAAAGAAAA AAGCAACATGGAGACTCTTCCAACATCTTCTATTATGGTTGATACACAAA CAAACACAGAGGAGCTTCAAGAGCGCCAAGAAGAAACATCAACGACTAAT AAAACAATCGAAGACATCAAATCATCCTGCTCCTCATCCTTCAGTGTATC AACGGAAAACTCAAACACAAGCACTCGAAGGAATAGTACCGAATCAAATA TTTCGTCAGGATTAGCTACACCACTTCAACTTCTCTTCAGATCAATTTCA TCATCATCCCGATCGTCCACTTTAGATTCACCCATCGCTCCTACTTCGAT ACAGAACTCAAATGTTCTGAATGGTCTAGATCAGCTTTTGCAAAGAATTA CCAGGTATGTGTGCTTTGTTTATTACGGTGTGTACTATTTCATTCAAAAG CAACAGTTTTCAGCCTGTTTTATTGAAACTAAGAATAGTGAAATCCCCCC TGTTGAAAATTCATTAACACGTCATAAAACTAATcgcaaaatagagaaaa aaaacacattttgtCAGTCAAGTTATTCCACGATGAAAGATATTAGAAGT ATGAGTAAATGATACTTTCCCAACGGATTTGAAGGTCCTAAATATGATTT ATCATTTTAATCAGTTAAAGGTCTGGGACCGCTAGTTATATATTATCTTA TTCGATCATAACGAAAAGGAAAAAAGGCGTGAtaaatatttcgaaaattt ccgaatcaatcataaaatctattttttctttACAGTGAAAGATTTTTAGA ACTTAGAAGAATCCAACTTGGAGAGCGACCAGTAACAGGGGGTAATGCGA GAGCTAGTATCGAGAACTTCTTTGAGCGTGCAATCAATGGTCCAACACAA CAAGAAAGGGCGGAAGAAGAAGCTCAAAACAGACCTGAAACANGCCAACG CAACAAGAAAGGGCCGAAGAAGAAGCTCAAAACAGACCTGAAACAGTCGC AAATGACGTCCAATCCCTTCTACAACTTAGCAGAGTAAGCTCCGCGATAC AAAATGGATTTCGACGTCAGCTTGAAGCGACATTAAGTGGACGGTCTACT GCACCAACAGCAAGAAGCTCAAACAGCAATACAAGAGGGACTAGAAGACC CGTCCCAAGAAGGTATGACAATAATCGAACGGAACCAGCACGAGGATCTT TCCGAGACCAACTCAGTAGACAGATCGCTCAACGACAACAAAGACAACAG TCAAGGTAAAAAAAACTCTCTAATTAACTTACAGATGACTTCTCTATGCG CTGGGTTAAATTTCCcaagaaagatattttaataTACACTTCTCTAAATG CATAAAATCGCCTTGGTTcttgttttcaaagttttgttgCTAAGATACTT AAATGTCATTCGACattattaatatttattttacagTGTACAACCTCAAG AATCTACTCCCGCCAGCCGAACATCGAACCCGCCACCGCCACCACCATTA CCTGGGACATCCACACCTTCGACAACGCCTTTGGTTGATCCAGCATTACT TCAATCAACAGTGCAAGCAAGTGTACAAATCTTAACAGAAAGCATAGCTA CTGACATCACTCGTCTACAAAGTCTACAAGTTGTCAGTAATATGCTACAA GACGATTTCCGTGATGAATTGGAGAATATGGTTCAGGTAAGAATCTTAAC ATCCAAACCTTTCGAAATTACAATTACATTAATCTAAGACATTTTTTCTG CTTTTAAAAAACCAACCAAGTTAATCAAAGCGTGACATACAaaaatcaag tttgaaaatttagTTATTAATTAAGTTTGCCTATTTCAGCAACGTGTGGA GTCATTAGGTGGAAACACCACAACGCCACGCCCATTCGTTCGCTCTCAAC AACCAAGACAACGTCCTCCGATTCAACGCCCAACGTCATTAAGAACAATC AACGAAAGAGGAGCCAGCTCACCACACGAGATTCAAGAGCTTAAACAAGA ACTGAACGAAATGAAACAACTTCTTCGAATGACGATGGAAGTACAACTTG ATACTCAACGCGCTGTTAGACAAGAAGTTGCAGCTGTCTTTCAGGCTTTC ATGAGCGACTATCTCGCTAGTAAACCAGGTAAGTTTCTTCAATGAAAGAA GTTATCTACGGTTTTTGAACCTTAAACACAGAATTCGCAACAATTTTCCA ACGTAAATTAATCTTACTACTATTATCATCATCGTACCAACCCAATATTA TTGAATTCTTTCTGTCGGGCTGAATTGCACAGATGTTACTGGAAGTATTC GGTAACATAACTCTTAATACAAATTTGCATTCTGTTTTAGACCAACAAGA TCGTCCAACGTCAAGTGCCATCCTGAACATTCAACAAAACAACCACACAA CACCTGTCCAGAGAGGACAATGTGCTATTTGCATCGACCAATCAATTGAT ACAGTTTTCTATCAATGTGGACACATGTGCGCATGTCACTCTTGTGCATT ACATTTGAAAATGAACGGACAGACTTGCCCCATGTGCCGAGCACCTATCC GTGACGTCATTAGAACATATGGAGCTGGGGAACAGTGAGAACACAAAGAC ACTGAGAGTGTATCACAATAATCGCTACTACTACAAGATTTGGTTCCGTG CCGTAGCAGGCAGCAGAAGCAAAAATAATGTTATAATGAACAGATACTAA TATATTTAAATACtaatctattgctttataattTATTGTAAATTGTTGTC GAAATAAACAATCCAAAATCGAAAGTTTTTGTAGAGATGTTTTATTCTAG AATATCcgaaaatcaatttcttcaaaCTTGTTCGAATTCTGAAGAATTGG AAGTTGtcaattttccttttcaatatttGTAAGAAGAACGTAAACACAAA TGGATataaattggtaaaaatattctttCCTTTCACCTTCTTtgtacaaa ttttacaaaattaaagaaaaaatctaaaaaatgttCATAATATTCTATAA TCACTGAATGTCCcgtttgaaagtttcaaagaATGTCGTTTTTGGGATAA ATCTTTATCTCTGTATATATATCCTCCATGCTGCCACGATCCGATAACCT GAGCACTAGCAGTGGTTCCTGATCACCTTTTAAAGAAAGTCTAGTCAGTT CAACCCAAACTGCACTCTGCAAGTAATAGCCTAACTTACCTATCACATGG GTCACTTTTTCTTCTTCGAGCGCTTCGGTGACCTACATATTTGAAAGATA AAAAACTTGAACAAAGACGCGAACTGAACCTCTTTAGGCTAAAGTGAATG AATTTAACATATTTATGAACATAAAGAAGCGTAAGAAGGTGCCATGGGTT CCAATTTGACTTGATGAGATGAAATCTAACTCAATACAATCAAAACGATT TATGCGACTTATTCATTGTAGTCTTACAAAATTAGAGGtttgggaccatt caaaaagtacctACGCTCTTGAGGGGGAGGGGGTGCCCCCAAAAGCGTAC GAAAGCGTAcgtggggggaggggggtccttgaggagaagtaggtacgctc gtaatttttcctaaactgtcttttttgagagaaaaacgcaatattttcac atcaaaaaattgtttttgcgattgttatttttcatttctcctttggtatt ttttttcaccttagattcttttaatttcttgagactttgttataaatacg attggATACCTACATATGTATTCTACTGTTACTAGAGTTTCAAGTTTCGA CTTTGGTTAGGGGGGGGGtgtactaaaaataaaaagcgtacgtacgctga atggggggggtacacataaagcgtacgaaagcgttacaagggggaggggg agtcaaaaatttgccattttcgagcgtacgtactttgtGAATGGTCCCTT TGGTCAAGATTTCGTGAATAAAACACAGTATGACAGTATCATCTAGCTAA CTTTTTGAATGATTGAGATAAAACCGTTGTGGAAGGGAATTAATAGAATG AATGCGTAATTATTAAATATACCAAGCTTACCTGGATATAGATCGGTCTC TTTGTTTATGCTTCTTacccttggattttttcttaCGTTGAGAAGAATAA TCACTATCATAACTTTCCTCGTCCGATGAATAGCGttcctttttcttctt tttcttgcttCGTTTCTCTTCGTAATGATCGCTATCATCCGAGTCGTATT TCGATTTCTTTCGACTTTTACGCACGGGCGAACGACTGTCCGAGCGGTGG CGTTTAGAAGATTTCTTACTACGACTTTTCTTATGATCACTTTCTTCGTC CGAACTGTAATACGAATCGTCCGATCTGTCCGACTCACTGTCCGAATATt tcctcttctttttctttttggaactCTTATGTTGCGGGCTCTTTTTCTTA TCAACGTCTTTGCGTTTACTCGTTTTCTCCTCGTTGTTACGTTTCTCGCT CTTATCTTTAATTTTAGAGTCCTTTGAAATGACAACAGGTACATCTTTCC TAATGTCGTGTTCAGCTTTGGTAGGTTTTTGGGCGGGAGATGTATCCTCC TCGTCTGTTGTTGCTTTTGGTTTCCTTGGTAACGAAGATGGTTTTTCATC GAAACGAGATTTTCGTGGAGGAGGTTTGATTGGTTCTTCTTCCTCTTCAC TACTCGTGACGTCATCTTCACCTGAAGAAAATATGCGTGTTGATTTTCAC TTTTGAGGAGCTACTATTCTTAACCTTTCCAGGTTAAAAACtttgaatca attttttttttttgaattctaaaaCTTGAACAACGGATTCGGTAACATTA ACTGGTCAGGAGTTTTAGCTTTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049116TCONS_00049116Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:96315..102139 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.64 1.52 1.65 1.76 33.31 20.74 11.47 16.72 12.04 33.09 47.24 6.25 35.76 13.36 7.01 42.88 4.17 8.68 30.16 55.53 5.48 6.74 2.95 9.94 21.57 21.87 23.11 30.27 76.36 45.53