XLOC_031068 (gene) - C. hemisphaerica

Overview
NameXLOC_031068
Unique NameXLOC_031068
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_148:285044..289265+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031068 ID=XLOC_031068|Name=XLOC_031068|organism=Clytia hemisphaerica|type=gene|length=4222bp|location=Sequence derived from alignment at scaffold_148:285044..289265+ (Clytia hemisphaerica)
AAACGATTACTTCTTTCGTTTCTTTTGTGGAAAGTGCGGAAAATATGATA
TGCATAAATAGTGAAAGTTTTAAGGCAAGAAGAATAAGTTAAATCTCGAG
ATCGTCGCATGTGCTCGTATCTAATAAATCTTACAGATTTTAGTTTTAAG
AAGGCTTTTTATTCAAAGGTTTTGTCTGTAGATTAAAAGTGTAGACGAGA
CACAAAACGTTTTAGTAAAGAGGTTTATTGTGGCTTGCTGTATTAGTTTC
TTTCTAGGAGATTTTTGCTGTCACAGCTTTCAAATATTCTCTGTTTTCAT
TCAGATAGAAATACATTAACTGCAAGCAACGAAGCAACGAAGACCTACAA
ATAACACGCGTTCAAACAAGACATCATGGCACAAGCGATCATTATTGCAA
TCGTGGTGTTGACAGCCATCATTTTGTTATTCTTCAACATTCTCTCCCTT
CTTGTGCTCCTCTTCACGCCAAAACTACGTCATCGCCTCTCCAACCTACC
CGTCATCAGCTTCCTGATTGGTTCCTTGCTACAAGGTGGTCTACCGGCTC
CACTCTACATCTACAAAATCCTGGTGCACCAATCGGGAAGTGAGCCTGGC
TGGTTGTGCGATCTGTATCGTTTCccttacattttttgcaatcaCATTAT
GGAGATAAGCATCATGATTCTGGCTTGTGAACGTATGTGGGCTATCAGAT
ATCCTTTTACATATTCCAAAGTGTTGACCAGAAGAACTTTCAACTTCGTT
TTGTTATCTGCATGGTTTGTGACAATCTGCGTCGATGCCATCCCATTTTT
CAATGATAATCGTAACGATAATTGTTCATATGTGCCAGGCAGATCTTGGG
GTTTATCGGTCATCATATTTTACAATATTGCACCTTTTGTGACTGTCGTT
ATCAATTATGCTATCATTTGGAAGGTAGCTTATGGGTTTGCAATGGCTGA
TCGGAGAAGATCGGAGAGTTTGAGACAATGCAATCAGGTCACTGTTTCCC
TAATTGACGACGAAGGGAACAAGACGCATACGTCATCAATGAGAAGTTAC
CAAAAGTCCATTCAATTTACGTTGGAGATCAAAGCTACCAAACAGTCCAT
GGCAATAGCTGctgtctttttgttttgctgGTTGCCAATGAGTATTCTGT
TTATGGCTgatcatttttgtaaaaactgtATCTCCGAAAATGAATACTTT
GCAAGAAGAGTGGTCAAGATTCTAGCTTTTTCATCCAGCCTGTTGACACC
ATTGGTGTATTGTTGGTGGAACAAAGACTTTCGACATTGTGCAAGGCGAA
TGTTCAGGTGTAAAGGGAAAGGAGAATTCTCTGAAGCTTCCCACGAATAC
AGACTGTAGAAAATATAATCTAGGATATTAATTAAATGTATGGCATTATT
ATTATATGGAAATATTAAGAAGCAATAACTTTAACACTGTGTAAATATTC
ACCGTTTATTTTATTATTCGTTATAAAGAGTNAGCAATAACTTTAACACT
GTGTAAATATTCACCGTTTATTTTATTATTCGTTATAAAGagtataaaat
attgtaaaaagcAAGAATTGAAAAGGCATTTATAATAAAGGTGATGTCCT
CCCTCGTGTCCTCCGGACAAAGCAAAGATTTTGATAGCATCTAAACCTAC
GATAATCTTCGAAGTTTTATAGACAGCCTGTCGTAATTCCTTCCTGCAAC
ATTGGGGATTTTTATTAAAATCCCAATGATGGGGACTGATAGTCTATTGT
TCTCAGTTCAAAGATGTGAATGGATTTGAAGGGCAATTTTTCATTGAGCT
TTAAATCCTAATTAAAACAAAGTTAATTTACCAGCTGGGcagaaattgta
gggtattttttccaacCGCGGACAAAATCATAGTTAAACTttttgtgaca
cagggatgtatTGTAACAAATACACAGTCACAtaggaagaattttttttt
agattttggtccaaggagaaaaatattgaaattaaggAGTTGTTGGAAAA
TGTAGTGTTTGTGAATATAAATATGATACTAAATTTACTAATGTTTGATC
CTCTCTAATTTCCTAAAACAAAGCAGATATAATTATTGCAGACACTCTTC
TGtctggtggaactttttcccacagcgggatacaaaaattatatcaaaat
ctcaatggggatagaaattctattgttccaagctttaaaaatccagtggg
aatggcttcaaagtgcaattttttaaacatcgaatttcaaatggggatgt
gaaatcaaagtcaatttcctgatggggctgaaattatagggtatttttcc
caccggggatgaAATGTATTTTCATGTGGGGCTGGGGTCCAAGCGGGTCT
GTGAGACAGTGGAGTTTAACTCGAGCATACGAACATCATGACAATAGCCC
TCAAGGCAAAGGTTGAAAGTTTCGATGGTCATTGATACAGGGCGACTAGA
GTTTTCAATGTCCAAGAATATTTCTTCCCATCGTCGCCATTTTGGTTTAA
GAAATACTGAAGTTACTTTCTTCTATTCTGGTGTCTACCGTATGATGGGT
AGCATTACTGGTGTTCCTCTTAGTCCCATTTTTTCTCACTTTCTTATTGC
CCGTTGACAGCAAACAAAATCGTTTGAGGAAATTACCAGCTGTCGTTCGG
TAGTCATTATTCCACCAGCAATAAAACAATGGCACCAACAGACTGGAGCT
AAAGTTTATCAATTTGATAACCGCtctaatatttttgtttttatttcctt
CAGAATAACACCCGTTACAAAAGTGATCCAAGATGTAAAATGCACTCAAT
GGTCCCCAGCAAATCAGGTAAACACAGATTAAAATTAATGAAGTCTTTGT
GGCTTTGATTTCAAGATAGAACCTCAAATTGCTCAATGTTTTTGTGACGT
TTGCTTTCATGGCACCATACGAAGTCTTATGTTTAACGAAAGCTGTTTCT
TCTGAGCACCTATTACTTTCACGAATGGAATCTTGTCGTTGACGATCATC
ACTAGCGAATTTGACGGCTACACACCAAATGATGGAATAATTGACCAAGA
CCATCACAAATGGTAGCATGTTATAAAACACAATAACACTCAAACCCCAA
AACCGAGTTGGATTGAATAAGCAATCTTCTTTTACATCCCTGATCCCGTT
TAAGAAAGGAACGATATCGACAGCCAACGTCACTATCCATAACACCAGTA
TAGCCAGAATCATCGTCTTTCGAACACTTTTGCTTTCGTAACGAAATGGA
AACTTGATTGCAATCATGCGATCTAAACTGACCAATAGGATACTCATCTG
CATGATATGTCCACAGAAAAGGTACGGGAAGCGGTATAAATCACATGCCC
ATCCTGGATAATTATCCGGTGCAGCTAATTTACGGTACACGTACAATGGT
GCTGGTATGAGTCCTTGTAGGGCAGACGCGACCAGAAAGCTCATTGTTGG
TAAACTCGAATGTCGTTTCCGTAAGGTTGGGCTGGATGCAATGACGAGAA
GAGTCAGGATGTTGAAGGAGGTGAAAAAGAGAGCAATCAAGATGGTGATA
CTGTACATCAATATGCTGTCCATCTTTCTTTACACTTTATTCAGTCTctg
aaggaagaaaaaaatgtcattAGAAATATCTTGTAAACGAGAGAAAATAA
GTACAAGTAGTATAGCAAGTTTCGCTCCAatattttctcaaagaaaagcA
GTTGACGTGATATTTGAGCTCCTTTCCCAAATATTCCAAACTGAGTTACT
CTCAAAGCAagtttttttgggtcggcaatataACCTGATATCCAGGTAAA
TCCGAATACAAGCATATGTAATCGTTCTTACCATTCAAAGCAAAGATAAA
ACTATGTACAGTATGATTAAACTGTTGAAATAAAATTCCAAAACAAACGA
GAGATGAAGTGTTAAACCCCATCCACTCAACCACTCAAACTTTATATCTA
ACAGCACTATTACAAAAATACCATTTGATAactgtttataatttttttcg
aaaattatcactcctctcttaaaaataaaatgcaaaGTCACGTCAGTAAT
AACGACGTAAGGCCAATTGACTGTTACCATGGATAAAAGATCAATgggac
aaatatttttctcctCCCATTAATTTGTGTTTGTCCTCTAATTATTTCCT
CGTTGCGATTGGCATTAAATGTACTGAAAGACTGAATAATAATGCAGCTA
TACTGTGTATATAATAAGTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048884TCONS_00048884Clytia hemisphaericatranscript
TCONS_00048885TCONS_00048885Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_148supercontigscaffold_148:285044..289265 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.71	1.1	2.47	3.51	0.89	1.32	3.1	2.21	1.31	4.21	1.62	0.96	10.41	7.71	7.41	9.93	2.09	4.09	8.52	9.06	2.24	2.5	4.29	2.96	0.84	1.1	0.32	0.4	0.8	1.96