XLOC_030490 (gene) - C. hemisphaerica

Overview
NameXLOC_030490
Unique NameXLOC_030490
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_139:436783..442752-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030490 ID=XLOC_030490|Name=XLOC_030490|organism=Clytia hemisphaerica|type=gene|length=5970bp|location=Sequence derived from alignment at scaffold_139:436783..442752- (Clytia hemisphaerica)
CAAAACCTCAAGGAAGCTTAAGAGTGCCATTGCCATTGAAAATCAGCCAT GCATTACAAATTGCTATGGCCAAGCCGTCTTGAATTTTTTGGAAGCCTGT TTCAATTCTTCCTTAGTTCTGTTAGCTCAAGACAGGTAATATTATTTTTT TTATAGCCTTTCTATTTTGTCTAGAATTTTTCGCGAGCATAAACTTTCGC GAATGGCCGTTACTAGAATTTTTAAAGACATTTACTTTCGCGAATAGGGC CAAAAGTCGCGAAAATCGCGTAAGTTTCTGCTCGCAAATGTTTATACGCC TAAAGTAAGCGTATTATAGAAAGCTCTGGCTAAAGGAGACTTATTGGGAC GATAATGTAGGATGTAAATACTGCATCGCGACATACCTGGGGAAAAAAAT AAGACAAAATGTGATTAAATGGGTGGGGGGGTTCGAATATGCGAGGTGTA TGGAACAATTCTCAAAACTTAAAAAAGCGGGAGAGGAGTTGGAATAAGAA TGTCCTAGGTGGAAAATTTTCGAAAAATTGATAAGCGTGGACGCTTATCA GGTACCCGAGACAAATAGATTTTCAACTTTTTAAAGACGATCTTTTGTAG TGGGGGCTTACCAGCTTTCGGCGAGAATTGCCAGTCCACACTTTTCAATA CTTTTACTCATTCAAAAGATGCCAAAATCTTCCTGTTGGATAACGATTTT TAAGGAATCCTTAATTATAAATTCATGTATAATGGTTGTACGTTGATACG TCTCGCGAGTTCTCGTTAATTAGACTTACTAATTAATTACAGTGATTTGT TTCTTCCCAGGCAAAAAGCATGGCATCGAAAATAGCCTTAGCGTTACTCC TTCTCGGAGTACTCGCTGTGTTTCAAGCTGAAGGGCGGCTCCGTAACCAC CACGGGCGTAAACATCATCATCATCGGTTGAACGTGTTGGCGGGTGATCG AAAACAAGAAGTCCTTGCAAACCCTGTTCGCTCCATGGAAGAAGATGAAA ACCGAATGTTTATCGAATCATTGAATGGAAGAACTGACCAGGTAAGGCTT GATCTTCGAAGACAACTTATCATTCCTTCAATTTCCATGGCCTTCATCAT ATAGTCCATAATTATATGGAGCCCAAGTTTGGCAGCCGACAACTGTAACT TTTTTGTTTGTTAAACGTTTTTCGATCTCCCAGGTCTAGCGCAAATAGAA AAGGGGGTAAACTCTCTCACTCCCGGCTCCGCCGACAGCCACCAGATGAA TATACTTACTTACTTACTAAAAGTTAAAAATCAATTGCTCAGTTTTTGGT CACCTCATTAGAAAGATTTAGTTCAATATTCAATCACGATCTTATGTAGA AAAAAAAAAACTTCTCAACACAAGTTCAAATTCTATCTGGATTTTTCCAG ACTAGGGATCTTAATACAACTGTCTTTATTGAGTTAAAAATTGGTAGCAC AAAGTGAAGGTTACCGTGAGTATCACAGCTCGAATAAGTATCTTTAAAAA TTTACCCGATACCCAGGGAAAGGAAAGGTTGGGCACGGAAAAACTTAAAT TTTAATTGCAAACAATAATTTGATAGGATGACATTGAGTATGTAGCCCTT TTTCAAGTATGCAACTCGTTTATACATGTTATCGTTGAGTCGCTTCAGGG ACTAAATATTCAAATAATAATTTATTAAAACGATGGAGAGGTTCAAATTA ACAGAACTCCTCTTTTCATCAAATAGAGTGAAGCGTTGGCAAATCAAGAT GAACAAGCCCATACACGAGTGGACACACCAAAATCTAAAGGGAGCGGACC TACTCAACCCAAACCAGATCAAGCAAGACCACCACAAATGGTAAGTGACA AAAGGGTTACTAAACTCAAACCCTGTCCTTTAGTTCGCATTTTTTATGAT TCTGATAGTGCTCACGATTGTACCACGTCCCTCAGTAAAAATCAAAAAGT GGTGCAAGTTAACCTGGGTACGAGATTGGAAAGTTTATATCAGATCTATT GAAAACTGCAGTCGAGTCGCCATAACTCTAGTGCCAAGCGTTTGTCCCAA TTATGGAGAGGCTAAATAGCTCAAGATCCTTGAGTTTTGCAACTGTTCTT TGCTTGATTGTAGTGGTGATGTTCTTATTGTATAGTGAGGGCGGGAGGTT AAAAAATTTTTTAGTATTAGGAATAAAAAGTGGATTCAAGTGTTGCTCTC ACTATTTTAAAACTGTTTAATTTTCAAAGAAATTTTACATTTCTTAAATA CTTTAATGGGATAAACTTTCTCAGGGATTAAATTTCGTGGATTTCGCAGA TTTGGGTGCCATCCACGAAAATCCGCTAAATTAAGTCTCAATGGAAATTT GGAAGGTCCTCATCCGCAAAATATTTCTAAACAGAACTCAAAATATGTCA AATAAATACTATTTGAATGGTTACTTGCATCAAAGAGGCGCAAATAATGT GTATTTCAACAACCAACATGCATGATTTGACAGTAAAAGTCACAAAAATC GTGAAAATATTGCCACCCAATAGTGCCACCCGCGAAATTAAGTCCCTGCG AAAATTTTGAATTTTGCGGATAGGCCAAACCGCGAAATTTAATACCCGCG AAAGTTTATCCCATTAAAACTTTCCTCAAAATTGGAAAATTAACCTCTCT ACAATTAATTTGACAATTTTTGGCCCACACAGAAGAGGAGTAAACATTTG TCTCGCCATCATTCTCATTAGGGACCGTCTGGATCTGCATCTTCAACAGA CTCCTCTTCAGGCAGCAGTAAACCAGCCGGGACAACATCCGGAACTGAAA AAGAAGATACCGCTGTCAAAGAGGGAATCGACGAGGCAAAAGAAGAGGTT GAAAAATTAAATTGGCAAAAAACAAGCTTTGATGAATTCAATTCAAAGAG TGTTAAAGGAATATCAGGTACGTCAGTCTCTGCGGTTTGCGATAGCGTAA AGATCTGACTCTGACTCTTTTCTTGTTGGCGAGAAAGCCAGACAATACCT ACGCAACTTTTCTTATAACGCTATAAAGTGTCACAATTATAAACCTTTTG TTAAAAATTATTTTTCTTTGGATTAGCAAATTATCTTTTGTCTTTTGACG TGATACGGGCAACTCCCAAAATGTGATCACACGTAAAGTAATATAGCCGA GATTTTTAAATCAATGAAAATACGACCATAGGATTATGTGGTGGTTTTGC CCTAGCGACCAAGCCCGGTGGAATTTTGCCCTAGCGACCAAACCTGGTGG GAAGGGGTTACTGAGAAGGCCCAGAGTTGATTTCATTTTAACTTGAATTT CTTTTTTAGGTGGTGTCAACTCTGCTTTGGGTGGTTTAGAAACCTTCTAC GATAAATACAAAAAACGTGATAAGATCGGGATGACAATCGCTGCTATCAC TTTTTTCTCCGGCATCGCTACAGCTTCTGGAAATCCGATCGGATTACTTA TTGCTCTCGGGTTAAACGTGCTCAAAACCGGAATAACAATCGGTCAAAAG GCAAATCAAAAACCTGGAGAATCAGAGGCAGACAAATTGGAGAAGGTGAT CAAAAAAGCTTTGAGAGAATTCCGGCAGACTGGTTTGAAAGCTGAATGGA GTGGTTATCAACGGTTAAGTGATTTGTTCTCTGGCAATGTCCAGTTCATG GAAACCTTTAATGAGCAAAAGGAGAGCGACGTTGATGCTGATACAATGAA GGAAATTAAGGAGGGTAAATTGACCCTCTCTGAGGTTAAACAACGTCTAT TTGATGTCATTGTTGGTCGATTATACGATGTACTGATGTCTAGTACCACA CTCTTGGGTAAAGTTCAATACGAACTTCAACAACAATGCGATTATGATTT AGCTGTCTTCAAATTGAAAGAACGCAACTGGTTCAAAAAGAAGAGAGACC CTGCAAGCATCCCTGAGGAAATAGATGACGAGAAGTTCGCAAAGAATTGT CTGGATTTGTATGAGTTGTATGCCAAGATGAATTTCTACCGTGAGACAAA ATTCATTGGTCATTTGAACACCATTGACAAGCTGATGAAGACGAAACTGG ATGACAGATTCTCCTTTTTGACTTCTTCTCGATATAGTCCATCGTCAAAA CTTGATGCGTACGCCTACAAACTCCTTATCCTCGATATCATTCGCCAGAT GAACGAAAACAACAAAGATGTCTTCAAGCCATTGATCAACGTCTTTGGAA ACATCAAGATGAGATATATCGCCAACTATTTTATGACCTACTCTAAGAAA TACGAATACGTTAAATCTTATTTGGAGAACTTGGACATGAAGGACAGCGA GCTTAAAGATGTAATGTTCTGTAAAACTCAATCATTGACCGGCAGCTGTC GACGCATGATCGTACCACCGACAGGCACCGAAGTCGTTGACGAGAACTTT AAATTCAGATCAGCTCTGGTACCAAAGGAGAGAGTCTTGAGAATCTTTTA TAATAAGGATGGCCTTGGTGTTCCAATCAAGATTTTCGGTCCCGGTAATT TGGGAAACATGTTTTGGGATGCTGATACTGATAATCCTGTCAAGAAGTAT GAAATCAAACCATTCACAAAATCCGATAACACTCGATTTGTCAAAATGTG TGTTAACGAGTTGAAAGCGAAAAAAGAGGATCGTTTACCACTCCACAGAG CTCTTTGCACTGATCAAAATATGGATGTAGCCACTGCTATGCCTAAAGAA GTCAACATCGACACCTTACAATTTGATTCTATCTCAACATGGGAAGGGAA ATTTATCAGTTTGGGAACAGATGAAAAGGATATTGCTTATACGGCTCATA AAACGTACACGAAGGGGTCAGGCGCCAACGCTGAGACGATTACTGTCAGA TGGGGACCTTTCTACGGAGCAATCAAAATGACCCCAGCTTGTGGAAGTGT CTTCTGGGACAAGATAAAATTCCATCGATACAAGAGTCACGATATGACAG AAGAAGAACAAAGAAAGGTAACAACTGTTAACGATCCTGAGTTTTGCAAA GGTGACAATCTCTTATGCCAAGACAAAGTCATTGATAAATCTTACTTTCT GACCATCTGCAAGGAGCAAGAAATGAAGGGTCATTGCCAGGAGATTCCAA TGATTAAAGGTGAAGCCAACAATAAAATCATTGATCTGAAGCGACTTGGA GTGTACATTGAATCGAAGAAAGGTGCAACCGTTACCAACTTGAGCGACAA AAATGATCCCACAATCGCAAAAATGCCTTCCAAGAAATACACATCAAAAG GGAAATTCGATATGGTTGAACGTGATTTCAATGAAGAATTTGATGAATGT GATTGGTGGGTCACTGCAGAAACACAGAGAAATATCGTCAAATACACCAA TCTACTGATGAGTATGAAGATTCCTGATGGTGTGACCGTGGAGCTGTATA CAAGTTGGAATGCCGGTGGAGAGATGTTTGGTCCATATGATGGCCCCATG ACCGTTGATCGTGTAGATGGTAATGATAATGGAGTTGGAAAATCTGCTAC CGCTAGTTGGATTAAATCTATCAAAATTATTGAAAAGTAAAAGATGAGAA ACCGGGACGCTAGAAATGAAATATTATTTACATATTACAAATACATTTAG CAGTTTAGTAATATGAGTAGACAATTTGAAAATAAAATGTAACACTATAT TTTTGTACATAGACATTCGACATTCTGTTAGCAAAGAAGATTTTGAATCT GTATTTTAGCAAATTTCGACCCTGTTTTCTTTAATCTGTTAAAATCTGAC TTTTGGATTTTTCGTTATTATTCCAAACCCTTTAGAAAAAAGAATTTCGA ATGAGTTTCAATATTGGGCTTTTCCAAAAAAAAAATTTACCCCTACTATA GCCTGGGAATCCAAGCTCATAATTTTAGAAAAAACAAAAAATACCTCACC TCACAAAGTTCTAAAATTATAGAGCTTGGTGCAGGTAGATTAGTCTGACA CAGAATGTTATAAACAGTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047920TCONS_00047920Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047920-proteinTCONS_00047920-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:436783..442752 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01 0.08 0.04 0.1 0.11 0.09 10.49 14.41 10.3 7.11 8.3 7.86 39.03 26.19 22.94 60.66 17.97 16.29 0.07 0.07 15.17 16.37 3.39 3.81 3.25 3.67 6.53 1.96 0.09 0.21