XLOC_029990 (gene) - C. hemisphaerica

Overview
NameXLOC_029990
Unique NameXLOC_029990
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_120:191261..195284+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029990 ID=XLOC_029990|Name=XLOC_029990|organism=Clytia hemisphaerica|type=gene|length=4024bp|location=Sequence derived from alignment at scaffold_120:191261..195284+ (Clytia hemisphaerica)
ttcaaattttttctggaaaagcccaacaGAGCCCAATTcgatgtcttctt ttttcaaaaaaagatatatctagactctctaccttcattCATAGAGTGCA ATTTCATTTATAATTTCAGATTGAACAATATAATTGTctaaaaattataa gaaagGAAAAATGACTACACTTCTAATGCCACTTGCATCTGCAAGATCTC TTCTACCACCTTTTGTCATATTTGGTGTCACACCCCACTATTACATCAGT AGCACATGCCTACGACTGATGAAATTTGCTTTACCACAAGACACTTATGA GAAGATTGATCACATGATGTATCACAGTTATCAATCATTAGTAActtact tttttgagacctacACTGGAACAAAGGTAAGTAGATTTCAAAGATTCAAA ACAAGactaaattttcaagttttcaaaacTAAATAAAACCAAGAGATACA ATATTGGTGAAAGAGTTTCAAAATcctgaatgaaaaaagaaatttgaatt gaaGATGATTGTTGAATAAGTTCAAactattattgtttttatttaatttt aagtaGAGAATACATTACATTATTATTAACCCTATATCTTTGATGTCAAA ATGAAGAATGAATCTCCCTTGATAGAAATTatttaccttattacacaaat attactaggaaagtatttaacggccttgaatATGACACAATCtgaaatta acacaaatttttcTGCGTTTTTAAGGAGAcagcggctggttttaattaag ggggtttttattaacacaaaatttttcaattcgtgttaataaaatgacta gtaatatttgtgtaataaggtatatcATAACAGCTAAAGTAAGTGTTTAA TGTAAGTAAtaattcaatttcttttgtaaTATTGTCGgggaaaatcaaaa tataatagccgcattctttttcaccgttcaacacattcaatttcttttgc AGGTATACTTTTATGGCGAAGATCTTCCTACAGACACTACTGAGAATGTT TTATATATCTGCAACCATCAATCTGCAAGTAATTTGattcagaattttga aaatatgcttaatattttcactttacTCTATAAGGGAATACAGTTTAACA AAAATAAGtactattttttttaaatcaattttttgtataaaaagaaGGTT TGTATAGATTAGTTCAAGGCTTAATAagtcttttctatttttcttttgaa ttttagttGATTGGTCTTTGGCAAATTTTGTTGGTATTCGTCAGAACTCA ATTGGTCAAATCAGATATGTAATGAAAGAACTGCTGAAATATTTACCTTT CTTTGGTCCTTATTTCATGCAGGTATGTTTTTATCTTAAGAATTTGTTCC CTACagtaaaattattcttataactTTTAGTTGCTAAGTTTgatattctt tctttttaatgacATATTCTAGTTTTCTAAGCAAGATCTATCTATACCTC TCCAGGCCACATCTTCATtcttcttgaaaaaaattcttttatgTTATTGA GTTACGTCTATTTCCTTTAGCACGGTTGCATATTTGTTCGACGTGATGGA AAACAAGACACAGAGCTGAGAAGGTTTGTCGAATTTTAGTCAATTCCAAG TAAGATCTTTAGCAAAAGAAATTTGGAACTGCATGGAATCATtaactttt ctttatttttctcattaaaGGAGATGGATACGATTCCATGATGACAGAGT AAGAGgggtaaatatgctgaaaatttaataaaaatagtTCTATATGAGGT CCAAGGgctttgaaaaataactattgaTGGTTTGAATTAAACATGAGATT TGTTGGACTTTTGGCATCTCAAACTCTACGATCGTAATCTTTGGTCCTTT GTCTTTTAGTATTGGATTGTGATATTTCCTGAGGGTACTCGATATACTTC AAAGAAGAAAGCTTTGATTGAAAAGAGCGAACAAGCTGCACTAGCTGCAG GTAAGGgttttattgattaaaaaagaaaccattttcaacaatatttcaaa atatcttcaGGACATCTTGATCCTTGTATAGAAATCTATACAAAGTAATT TGTTACAACATTTCTTTCAGGTTATGAACCATTTCAAAATGTACTATTTC CTAGAACTAAAGCCTTTGAGGTAAGTTGAAATTGTATCACTGTACAAAAA GGGTTTCCTTTTAAATTATATATAAACTACTTCTGCCACTGCAAAGATTT GTTGTACTTGTCTTTAGTATTTCGAGatttctcaaaacttttaatGCAGA TGtatatctttttaacaattcTTATTAATgcagaaaaactgttttatgat tcatttttttctgtttaagtTATCACTCGAGTACTTGGGGGACTTGGACG CAGTGTACGATTTAACAATCGCTTTTAAAATCCCATGGTTACCTTTGAAG TCGAAACAACTTGGACCTAGTTTGCTAGGTAAAATATCAATAATGCTCGG CTCAGCAATCCCTTTTGCTGCACGACCCtacatttattttgaaaaccaaa taaAACTCCCTATTAAATGGTAAATAGATAtgattcaatatttttattcg tAGAAAAATAGACTTCGCATGTTTTTAAAGGCTCCAATTTTCCCTTATGT GGGGCTTTTgctgaaaatcttttaaaatgggTCTGTTTCTTGCAAAAAGA CTAAGCTAAGGAGACTCAAGGATTCCGTTTTTTCTGGCAATTTTTGCCGT TAAAATACATtttatgtttgaattttttgaaatcaaaatattacaagCTT TCGAAACAGTTTTAAGGCTCAAACTTGACTCACTTACCTGAGTCAAATTA AGTTTCAGTGAAATTAGCGTTTCAAGAACGAAATATTTTAACTTTGATGA AATTTCGAGGTTGCGGGCATAAAATCTCGCCCTTTGTAATCTTTATCAAT TCTTAAATTATTCTGTATGTAACTGTTCATTGGTTTAATATCTTAGAGTT TGTGTCAATTTTTGGGAGGGAAGTTCACATGCATTTTCGAAGAATACCAG CAAAACAAATAGACGGAGTAAGTGTgcttagaaaattttaaaatcttaaa gttttatttaattctaATTATACTTCTAGTCAAAATCAATTTGTTTAATC TGTCTTTCATCAACGTTATCAAATTCGAAAGCAAAATGGACTTGAGATTA TATcccaaaaaaaatgtaaatcatTTTTCTCGTTTTTCTTTCAGAGTGCG GAACAAAGGAAAAAATGGCTCTATGATACCTTCAAGGAAAAAGACAGGTA TAAACtgttattttaaaaagtttccAAATGCAAATCATTTAAAATCATGC GTAAGTTTACTAAAGATCTGTAACTGGAactcttcaaataaaaaaagaat ttgttttgatatcttTCTATACCATAGGCTGCTGGACCATTTTTACAACC TTCAATCTGGTGGGACGTTCCCCGGTGAACAGCGAGAAGTTCCTTTGAAG CAACACCAAGTATATCCGTATGCCTTTTTCTATTCTGCTTTACTGGGCGT CACTTTAGCTACTGAAACAGGGCGGTATTACTATGCCAAAGCGTGGCAAT TTGGTGCCATCACTTGGATACTTACGCCATTGCTGTATCGAATTTCTGAA CTTTTGGGATGATCAAATTACATAGTAGCGAGATTAAGGAATGTTTGTGA CACTAAACGTGTGTCCGTAGCCTAGGAATTTAATTGATCTAAAGCAAAAC TGCTCAAAAACTAGCCAGTTACTATAAATGTTATATGTCATATTCAGCTT TCCTCTAAATTCTTGAAGCTTTACACACCAAAACCAAATTATTTCAGTAC AAACATGTTAGGCCATAGGTAGTTTgcatataaaaatcaaaactattTTG GTCTATTCTGAGCTACGTTATTATTTGCCGATGCTTATTCGACTTAAAAA TTCATTTATTAAGgttaggggccgtccacatagtacgtacgcactaaggg ggagagggggagTCAAAAGCGTATgattgcgtacagggggaggggaaggg tcaaaggaaaatgtacgtacgcag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047003TCONS_00047003Clytia hemisphaericatranscript
TCONS_00047004TCONS_00047004Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047003-proteinTCONS_00047003-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_120supercontigscaffold_120:191261..195284 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AGPAT51-acyl-sn-glycerol-3-phosphate acyltransferase epsilon Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.24 11.5 2.54 0.87 10.47 8.82 10.51 10.57 8.13 9.13 7.76 7.11 7.28 6.71 6.74 6.72 7.06 7.53 3.91 6.21 5.81 6.7 18.47 17.16 7.67 9.46 4.76 3.22 10.02 10.43