XLOC_029770 (gene) - C. hemisphaerica

Overview
NameXLOC_029770
Unique NameXLOC_029770
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_116:155889..162255+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029770 ID=XLOC_029770|Name=XLOC_029770|organism=Clytia hemisphaerica|type=gene|length=6367bp|location=Sequence derived from alignment at scaffold_116:155889..162255+ (Clytia hemisphaerica)
gggtggaaaatgtttaaaaaattaattagcgccccccccccggctattag gtacccaagagtaacACTATACTGAACCGTTAGTAATGTTTTTTCAGcta aactataaaaaaacaatgTATCGTGGAATTTTCTTACTGGTTTTATGCAT ACTCAGCACATATGGCAACTCGTCAATCAAACGTGTACCGATTCCTAATT CGTTAGATTTCACAGAAACCGTCATATACGATTCATCGTCAAATCAAAGT AATATAACTTGTCCACAAAACCAAATAGCTCTTCTAGATGGACAAAAACA GCTTCAATGTACAGATCCAAAGACTATTAGTAGTAAGTGTttgcaaaatc taaaaataccCATTGTTTACCCCCTAACCTCAGTGAAAATATCCCTTAAC TAGATTTTTATGCCTCTATTTTCAACCCCATATGTTTATTTGTTAAAGTA CGTTTATTAGGAACTTGAGAGTATTCGATTATTTTTCTCTTTACCAGATT GTATTTTTCCGCTGTCTACTGTACCGGTTAACTGCAAATTGTCGTCCATT AATGTCCGGAATACCGACCAAATATGGGTCCCTTTTAATAAGGGCTGTTT TACACTGAACAACAAAACAAACACAATAAAGGTAAATATGTAATATTGTA ATATTGTTAACAGTTTTCACCAGTCACGGCGTGTAGTTCGGAAGGACTTT TGGAGAAGTTTGTGGGGAAATTataaattctttgaaaattttggttttcT TACCCTGGTTAGGGTACAAGCATCAGCAGAAAACTCTGACCATCTGTCAT AAATGTTTATTGGCTAAGGTTCTAGAAATACAACATCCACTTTGTACTTT TTAGAGTTCTTGTGATAATCTAGGTGGCTGGATATTCAAAGCTGATTTTC TGTGCAGTGATGAGAAAAACGATACAACATGTTTCGTCTTCAGTTTCCCT GGATTCGTCGAGAAAGGTAAAAAGTTAACCTCAGTTTACCTCAGATGACA CTTTATTTATACTTGATGTATGATTCTTGGTATTAAAAGTGTCAGCTTCA ATCTACTagattaaaaaatttgaattaatttctttcttttctgaaaactt tCAACTTCGGTGATTTCAATATGTATTTAGAAATTCTTCATTACTTTCTT TGAGATAAATGTGTCACAGGTTCAGCCTTGTGTTGAACACCGTTCTCCAA GTATCTAAAGGGTTGCAATAGTTGTCTGTCCGTTGATTCGTGCTCCCCTG TACTTAGGACCTATTCCGAGATATCGGAGGGCTTTGTATCTATCTTGGAT GAAAAGTTACAGTTGAGGTCATCGAGACAGAGGTATGAAAAGAATCCGTA ATAGGAACGATATCACTTCCTTATAGATTTGTTGGATCAAACACCAGTGC AGACAACAGCTTCTACGACTTTCGTAAATGCAACAACAGCAGCTACAACT AATTCAACACTTTCTACGACATTTTCAACATCCAATCAAACAGACTCAAC AAACTCATCGACCAATGCAACAGTTGTAACACCATCTCCTTTATTAACTA CAATGGAACcaataattgaaaattcaacAAAGTCGATTGTAAGTAAAACA CCTGCAATCTCAAAGATCCCCGTTAGTTTTAAACGGTAACAGGGCCAGAA CCATTACTTTCCTTAGATATCCAAGCACATGATTGTCTTCACTAATAAAT AAAAGTAGGAGGTGTTTTTAAGTGATATTTCCAATTCTGTAAAATCTGAT AAATTTAAACCATAGTATGTCTAAACTAACCACAACCTGCCTAACCGTTG TTAATTATGACTATttcataaggcattgttaaccgAAGGGACTTGTTTGA GCTAAGGAGACATTagagttatagaggtttgagttaaagagactaGCTCT ACTGTATCTTTAGGCTCGTGTCACTTTGAGAGATTTGTACCAAGAAGGTA GCTACTTTCCGAAGGTGTGACCTTTGTAGAAATTCAAAGCCactatttat tttcttttttcatttctctAGAAAGCAAACGCGACTGCTATCAAACCGTT GATAACATCAACAACAAAACATCCAATGACAACAAAAATAACGTCAACGG CGAAAAATGGAACAGTCATCATTGTTACCATAGCAACCACTATCGATTCC ATTACAACCATAAGCCTTGGTAACGAAGAGGATGATAAGAACAAAGGATT ATTGTTATATATTTTGATCCCAACATGCATTGCAGTTCTTATTGTTTTGG GATGTTGTTTATTTGTAATCTTCTGTCGGAAGAGGTAAGGATTAGAAACC TATTAGTGAAATACTCAAAAGGGAAACACATACAATGAAATCTCTCTAAT CGAACCTCTATAaatagactatgctatagtctaagacaaatcaccaTCTA AGAAATAGCccaagccgaagaaaattcgcaaactgttttttttgccgaaa agagtttacagccggtagagtttgccagtcttcgaaactctcccgccaat tttttttcgtaaaccgccataccgccatattttcccgcttttaatatcac tgtaacggacgatgtTACTCTATAAGTTGTGTTCTCCTCTAACTCCAAAA AGGAAAGCAAACCCTCGCACAAGCTCGTCTCCGAAGCTCAAGATCGAATA CCACTTTTAAGTGTTATTTCGAGTTATTGAAACTTCATTAATTGAAACTT CATTAGATATCCATTGTCTGGGTATAATACTACAACTTAGTCGTTGCACT TTTCTAGGCATCCAAGCTGTAAATCATTCCCTTATTTGATGTTTCTGTTA TATTCAACTCGGTCTACCTAGATGCTTATAAACCCAGGGTCGACAAATTT TTCGGTTTGCACAATATTTGAATTGACAAAGTATACATactcttgtgtgc ttaattgCCTTCTGATATTGGAATGCAATTTGCTTTAGGGACACCAGgct gcaaaacaaaaacatcaaaatatttaagTTTACATCCTGATCCGGGCTAA AATAAACCGAGGCAATGGATTTAGTCAAAATCTAACccatatatttattt ttaaattttcaggtgCTGGAAAAGAAATCGAGATTCTCGTaagtttcaat ttcaatttttacaaaattttttgaaaaacttttaaatggaCAATCTGATG GTTTGAGATCTTATGTCACCTTGAGATTCCTCCGAAGGTCCTCAGAAAAA CctttctatatttttttttctaaactgtTTTTCTATTCAAGATgcaagtt tttgatttttgcagCATAAAAACCATAGAATTTAAATAGGCATTTCTCGA CTCTGGAAAAGAGTCCGTTTCTTGAGTCCTGGTAGAATCTACGAGTTTGT GACAAATTTACTGTTATACTATTTTACAGTGCCCTTACTAAAGATCAACC CTGGTAGTCCAGTTGATGAAGACAACATTGAAGAACTTTATGCAACTCCA AccaaaaagaacaaatcgaagaaaacaaaacaaaagaaaactagTGACCA AGAAACACCTCCAAAACCTATATGGCCTGATTACGATGAGGTAATATGAG TTTCATTAACTATCTATCATTTTAGGGGCCCCTccaagcggtttgcgtga atgcgtgaatgggatTTCTTCATatgcgtgaatgtgtgaaaatttaaaaa aaattgcgtgtgtgcgtgaattggaaagctttgcgtgaacGAAAATTGCG TGAGTTGCGAAAAAACATTGcgcgaatgcgtgaattgaaggtccgctgtC AAAACATATACCAGGAGCTTATGATTTCAAAAAGCCTGTAAAAATACTGT AATCCAAAATTAGACATTCCAAAATCATCCGGGAGAGTATTTTGAATCTT TGATCATTGAGTTTCGTTGAAGACACTCCGTTGTTATCATACAGTGTCCG AAAGATAGAATCAAGGCAGGTTAAACGTTCtcgaattaaaattaaaaaaa aacagccaaaagtGAATCATTTAATCCTTGAGCGAGTATTaagcatagat ttataaagcccgaagggataGATGCCGTGCTTTggcagagttaaaactct acccttccaacctaacttagagcacttccaaatcgtttgtggttttgaaa attcgtttgaaattcccttttttctaaagtattacgaccatgattgtagc tctTAGGGCTTCATGAATTTGTGGTATTAAGGTGACACAAAGGatatttt ttactatttttttagGTAGGTGTGACCATTGAAGGAGCGTACGAAAAACG GGAGAGTGCGAACATAGAAGACATTCCAAACTACGGAGTGAGCGCCAAAC TTTTGCAAGCGGATGATGCTATCAAATCACCAACCAAAGATGAAAACCCT TACGAAGCATTAGGTCGTTGTAATTCTTTCAATCCTAAAAGCAGAGctga aagagagaaaaataaagaacaaatagAATTGAAAGAAAAGCCCACCAAAA ATGATCCGGATAGTAGAGAAATGAAACCGGACATGGGTGACGAGGTTGAA TTACCGTATGTCGGAAAAGGTAAAGCACCAATGCAAATGTCTTCTTTTAA ACCGGGTTCCAGTATGCGGAAAAAACAACAACGGACCTCGATTCGAAAAC CAAAGCGAGATGACGATACATCATCGGAAACTCACGAAGAAGTCACAATC ACTCCTTTAccgttaaaaaaaaatttcaacgaaAGTTTGAAAACACCGGA ACTTGAATCGGGTAATTTATCGACTCATTCGAGTTACGAACGATTACCTG ATGAACTTGATCGAACGGATTCATCCAAAGTTGATGACTCGACAAAACAA CCAGTGGAAAATGTTGATGTAGCAGGTACGAACGAATTGGAACAAAATGA AAGCAATACGGAAGAACCGGAAACCGAAAACGTTGTTGACAAAACACCGG AAAATGTAAACGGCCCCACAGAGCCTGATGAAAATAGTACAAATTCTACA CCACCACCTAAACCTCCCAAATCGAATTATGCCGATATAGAATTCATGAA AGCTACAGAAACTGATAAAGACCCGATAATTATTCAAAATGGTAACCATG CGCCGAGTGGAAATTATACTGACGTCATTATCGACCCGTGATGTTACCAT TATTTGATTTCTAAAGCTTGAAGGTAAGCAACAAAGTGATTGATGAATTG TCTTGAATGAGTTAAACATTAAATTTGTGTTCATGGTCAAGAACAACGCC AAGTTACAGCATcaatataaatcaaaaattgCAACTTTCAAAGCTTGTTG TGGCATGCTGAAAGAATGAGATTGAAAATACTGTATCAAACCTATGAATC GGTACACGAGATTATTTCTCGCCTATCAAACCTCAATTTTCAAGGAAATC GAGTCTCTTAAGGTCAAGTGAAgtcaaaaaatctttatctgTAAGGACAG TAGACAATCGCTTATAAGTCTAGTGTGAATCGGTCAATCATCCCATGCAG CACTAGGGTTCGAGACCATGGCGCTCTAAATTAATTTAGAGCGTCAtttt taggacccattttcatTGGGTGTGGCATCGCAGGGGATTATATTTATTGA TTGAAACATCATTTGTTTGAGAAAacactattattattattattatttaa aattttagatCTTTTAAAGCTTGACTACCTAGGAATAATATTTACAATAT TTAAAATTGACATATTTTTATACAATCTTTTATATCACTGagcattttaa aaaaatttatggaaatcttttgacaattttcttatttttgataaaaaaac tgaatttttgaTTCGagttaaatatttaaaattaatGCCATTTTAATTCC GAATGACCTTCCTAGAATTTCTATATCAAACCATAACCTTATTAAAACCT ATCTATGTTTGggatatattcatgatattcgtgACGTATTCTTTGATACT GAAATAAAGGCAAGTTTCGATGTTTTTCAGTAACGCCTGCCACGAATATC AAGAATTACGAAATGAGACCTTCTATAGCCTACTATACAAAattatttac aatttacaaATTTAATTACAAAGAAATTTATTCAAGTGACTTGACTTGAT AGAACACTTCTCATTCACAACCTTTTGACAATGAGTCGATCCAAAAATCG AAACACAaatcaatttgatttgatttcggGCGTTCTCTAGATGgcaaata agtggcttcattttccatccaggagtctcgagtctagccctttgggctcg TAAGTCAATGATTCCAAGTGCAATCAGTTTATCTTAAATAGTGGGGCAAG CGAATACGACATTGTTTCCATCCACGCTCCGCTGGAAAGTGGTATCTGGC GTTCCAAGCATTTCCAGTTCAACACATCCTTCAAAATTCTTGGTTGTACT TGGTATAGATATGCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046637TCONS_00046637Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046637-proteinTCONS_00046637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:155889..162255 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.28 0.38 0.2 0.83 0.65 9.92 10.07 4.53 12.6 2.31 6.43 8.34 8.37 10.2 6.47 3.65 6.71 14.42 19.06 2.28 2.47 3.64 3.45 5.33 4.62 117.78 69.41 8.78 10.68