XLOC_029159 (gene) - C. hemisphaerica

Overview
NameXLOC_029159
Unique NameXLOC_029159
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_10:234643..238805+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029159 ID=XLOC_029159|Name=XLOC_029159|organism=Clytia hemisphaerica|type=gene|length=4163bp|location=Sequence derived from alignment at scaffold_10:234643..238805+ (Clytia hemisphaerica)
gtTCAATTTTGTTCTCAATTTATTTTGTACTTTACTACAGTGAAAGACAG ACGATTTTGTTTCacttcttttttcttaaaagaatCATCAAAGTCCAAAA CTAAAGTCGAAGTTGAAAAAAACGAtcgagaattttcaaaatgatgcAAA GTGGATTTCAATTCGAGATTGCAGGACCTGGACTAAAGGAATTGGAATGT CCAATCTGTTTAGGGATTGTTCGAAATGCAACAGAGCTTCCCTGTGAGCA CTTGATGTGTAAAGCATGTTTGGAACACTATGAAAAAGAAGTAACTGATA AATTAGAAAGGTACCGTTAAAATTGGTTGGAAGAGGGGATGCTTATTTTG AACGTGGCTTTAAGGGTCATTTTGGTGGTAGCTTAAGGGTCTTTTTTCAC TTTGGCTAGTTTTCCAGGAGTTACCCAAACATTTTATGGTTAAATAACTT CGCTAAATTATTATTAGCACGTTAAAAAATggtaaataattcaaaaagaa ggAAAGTCTCaaatataaatttctttcaGACTCAGGCTAGCAGTACCAAA AATGTGTGTGCAGCAACAGCTAATTAAAGCTAATTGAAATATGTTTCATT GTATATTTAGAGAAAGACTCAACAACGACAACAGCAGCAACAACAATGTT GTGTTCAGATGCAGTGTTTGCATGACACCTTACAAAGTAGAAGATGTAAG AacattttcactttcactttcaaacTAAATTTTCATAACCCCAAATTTGA TACACTAGGAATGAGGGTTTTAATTAAAGCCCActagaaatatttcaaaa cattgggccatttcattttttgaccatacaggggggtggacgaacatttc cagggggtaatccgagaagaatttccagggggtctaaagaagtttttttt tcattttttccaggggtaaaaagttattcctgaatttccagggggtgaac aactgattttagttcgtccaccctcacttttggtggttcttttgcaaatt atgccattttccagggggtatctacaatttttttttacttgaaaaggttc gtccaaccccctgtatggaaattttatggaacagcccattacCCAGCTAT TTAATTTAActgtttaaaaatgtttttcgtaaATGGTTTTAGAAAAAGTC GGTGAAGTCCATGGATAGAATAGCACAGACATCCGTACATATCAAATGCT TACAAAAATAATGTGACTGGGTTGGCTGTATTAAAGACTACACAGTAAGT TCAAAACTTCCaacaaaattttctagcttACAAAAAGTGCCTGACAAAAA TGAACGACTGAAGTTAAATAACGTAAACAGCAAAATATGAGTGtcgaatt attttcattttactttaatcggatttaTTTTCGTGAATCAACAAAAAGTC TGTTAGAAATGGCCCTGAATACGTCAAATATTTGTCAAGATTCGATCTTA AAATTTCGTGTGAATTCAATTTTGCGAGTCAGCAATCTCACTGTcaggaa aaagacaaaaaatcgtgaaaacgattctcgccaaatttaatataattata taagaaatcaaaaagaataaaaatcttTATCTTTCATACAGGATCACGAG AAGAAATGTAATTTCATTTGGATCCAATGTCCATTTGCTCAACTTGGCTG TTCTACTGATGTAAGTAAATCTCGTACACTtttcaaatcacattcattga CCCAGATAAATTTTCTCGAGATCTTAATTgttttcacaaatttttacCAT TCTTGCGAAATTTTCTAAATCAAATTTCAACGTAAAATATATCTTAAATA TGACATTTTGGCGTTTACaggacaaatttaaaaatattttgacagaTTCC GAAAATTAAATCcacgtgaaatttttcaaaatgctattcgcgaaaataaa atcTAGAATATTTCGGAATTTTCCGGATTGCGAAAATTACTTTTCTTAAC CATTAAAACGAGAACCCTGCCTCGAAAAggaatttctattattttacaaa aaatattacaagcCAACTATACATTTTATTTCAGGTTCTGAGAGGAGAAC TTATGATGCACAATGAAACCAATCGACTTGCCCATGATTCATTAGTTCTG GCTGCACTCAGCTCCTTTGCAGATGAGAGAAAAACATATCAGCATAAAAT AAACCAGCAAGGTGAACAAATACAGAACTTAGAAAAGCTTCTTCttaaaa atacccaaaagatcCAATCAatagaagaagaaaacgaaaagcTCAAATAC AAAACAGACCGGCAGGCCATGGTTTCCAATAAAACCACAAATGatattga aaatttggaaatgaAAATTGATGGTCACGAATTGACTGTTGGTAACTTAA CTGTGGCTGTAAATGATATGAAAACNTCTGTTAGAAATGGCCCTGAATAC GTCAAATATTTGTCAAGATTCGATCTTAAAATTTCGTGTGAATTCAATTT TGCGAGTCAGCAATCTcaggaaaaagacaaaaaatcgtgaaaacgattct tgccaaatttaatataattatataagaaatcaaaaagaataaaaatcttT ATCTTTCATACAGGATCACGAGAAGAAATGTAATTTCATTTGGATCCAAT GTCCATTTGCTCAACTTGGCTGTTCTACTGATGTAAGTAAATCTCGTACA CTtttcaaatcacattcattgaCCCAGATAAATTTTCTCGAGATCTTAAT TgttttcacaaatttttacCATTCTTGCGAAATTTTCTAAATCAAATTTC AACGTAAAATATATCTTAAATATGACATTTTGGCGTTTACaggacaaatt taaaaatattttgacagaTTCCGAAAATTAAATCcacgtgaaatttttca aaatgctattcgcgaaaataaaatcTAGAATATTTCGGAATTTTCCGGAT TGCGAAAATTACTTTTCTTAACCATTAAAACGAGAACCCTGCCTCGAAAA ggaatttctattattttacaaaaaatattacaagcCAACTATACATTTTA TTTCAGGTTCTGAGAGGAGAACTTATGATGCACAATGAAACCAATCGACT TGCCCATGATTCATTAGTTCTGGCTGCACTCAGCTCCTTTGCAGATGAGA GAAAAACATATCAGCATAAAATAAACCAGCAAGGTGAACAAATACAGAAT TTAGAAAAGCTTCTTCttaaaaatacccaaaagatcCAATCAatagaaga agaaaacgaaaagcTCAAATACAAAACAGACCAACAGGCCATGGTTTCCA ATAAAACCACAAATgatattgaaaatttgaaatgtgaCCAAAAACAATTG GAAATGAAAATTGATGGGCATGAGTTGACTGTTGGCAACTTAACTGTGGC TGTGAATGATATGAAAAGTAAGACACAGTCTTCGGAAAGCTTGGTCAATA TTAACAGTAATGAGATCAACAATCTGAAAACTTTTGCTGTTAGAATGAGT CAATTGCATATGAAATTGAGTGATACGAACATACACaacgaaaataatat tttcaattatCTTGAAGAATGGCAATATGTTGATAACGAAGACGTCATCT CTTGGAATATTTTTGTGGATAATTTTTCCGAAGAGATTGAAGAATATCCC TACCTAGACACCCTTGAAAAAGCTTCCAGGAgatacaaaaatacaattta tCCAAAATACTGGAGTGAGAGGTTGAACAAATTACGCCAATATTTGGTTT GCGGTGTTGTGGCATGGAACTATGTAAAACTTACAATTGGACCACTAAGA AATATATTTGTTACCATCTACGAGACGCTAGCAGAATTTAACGAAGAAGT TAGCAAAGCAAAATATTGTAGACGTTCGGCGTTGACAGCTAGCTATCGAA ACTATGAAGAAAGTTGTCTCTATATTGCTGTTTTTTATTATCGTGCGATA GAAGATGTATGGGTTTTGGACTGGGAAGACATAGAGATGAGCAAGTCTGT ACTACCCGGAGAGATGGTGGCTTTGGAGGCCAGCAAACATTGGGAAGGAG ACGTTATTTTAGAAATCAACGAGGCATAATTCAAAATGTACTAATCTTAA AATTGATCAACTTTAAATATCTCTAACGTTTAAGGAAATGAAAggatttt tctcaattttcagGACATTATTCGGTTATACGAGCAGTGAAGTTTAGTTC ACCTATATACTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045603TCONS_00045603Clytia hemisphaericatranscript
TCONS_00045604TCONS_00045604Clytia hemisphaericatranscript
TCONS_00045605TCONS_00045605Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045605-proteinTCONS_00045605-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:234643..238805 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3 0.25 0.64 0.62 0.27 0.43 1.57 1.58 1.16 0.8 0.77 1.56 8.28 8.05 5.76 7.89 6.12 7.72 7.22 5.09 3.45 3.32 2.05 2.02 3.5 3.18 1.29 1.04 1.87 2.19