XLOC_026945 (gene) - C. hemisphaerica

Overview
NameXLOC_026945
Unique NameXLOC_026945
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004034:1361..7781+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026945 ID=XLOC_026945|Name=XLOC_026945|organism=Clytia hemisphaerica|type=gene|length=6421bp|location=Sequence derived from alignment at sc0004034:1361..7781+ (Clytia hemisphaerica)
CCACAATGCATCGGGAAAATTTCTCTCATACTTTCGAAGCGGGAGACCGA
AAAACTGAAAACGTGATTTGCATGAAAACAAGAAAATGGCCGAGTTGGAA
GAGGCAGTTGGTTTTGCTTTTACTTCTGGAATTTGCTTTGTTTAGAAAAG
AATGCTGAGTAGGATGTCTGTAAGTATAAATAGAGTctccaaattaaatt
tcaagaaatttgatCTTCCCAACCATATCCAAAGATTTCCAAACCATAGA
TGGTTTTTTGATGACATCACTTGATTATATTTTGTTCCAAGTTGCCTgta
aacaaatgatttcatCAAGAATACATCTATATCAAAGGCCAAAGCTGTAC
AAGCAATATATACCTGAGTTTTCAGTGGGCAAGTCTATTTTTGTCAATGG
ACTAGACTTCACCCTATAAAGCCCTTGCTTGGAAAAGTTGGCTAGCCATA
AGTCTTAttaggcagttagtcacactaggaaatcaagctttcaaaaaaaa
caatatcagtcatctacaggatgtattagAAACAataaggatgagagtta
cctgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgcacatgtaaatgggtcagtgtttgag
gtccggcaaaatttccgggaaaaagCCTATCCGACAGTCCGCGGATCTAG
ATGGGTCCGGTCTCCcttgtagatctttttcttgggaattttttcttcaa
attagttttcaatgTTGGCTTGGCGCAAACTTTTTCATTTATGGCTCaaa
atttaggtaatttttcacagtttttgaaaatatttgtttcgtTAAAAAGC
GCTGGGTTATTTATTCACAAATGCCTTCAGGAGTTTTGCAGCGCATCTTT
TTGCTTGCGAGtgaagtaaacgatatagcactttcgcagcattaatcttt
gatatggaTTTCCGCGGgaagctagtgtgactaactgttagcGGCCAACG
TCTATATTCAAATCGACTGATCGAACTATCATGATACgggtttcaatgtt
ttgattttgcccagacccgatcaatcaaactaatcgaactgatTTTCTAA
TCGAACTTGATCAAACCTCATCGAACGATTAGAGTTCGAtcaatcgaact
gatcgaacctaATGGAACACTCACAACTTTTGATAAAACttgagttcgat
tagttcgattaggcaaaaaagttcgattagtccCGGATATTTAGTCCGCA
CGAATGCCCTCCCTTGCCGCGCGAACAAACTTTTTAAACCCGCGCGGTAA
ATATTGACGCCTGGTGGATGCGCCCGATCCGATAGCGTTACTGGCGCGAA
TTTACCACAGGTTTCGGAAAAGGATATCGGGAATAGTTTTCCCAATTTTG
AATTCTGACTTTAAATATGAATGTTGAATGGTACGAACTAGTCGAACAAG
TTAGGTTGTCAAACTAATCGAACCGTAATTAGTGATCGAACTTAAGGCAG
CAATCGcaaatatcttcgttttgcGTCGCCCAACGGACTcttgaaaattg
agtagaattgagtcggtgagtcagTAAATTTCTCGGACTTTTTTGTCGTT
GACGGTttcttcgttcaaaaattttattattgccgattttttgcaAGCGA
TTTCTAGTGTAGCGCATTCgcggcattttgactttgtttatcattacatt
ttGGGTCAAAGGTCACAGTCTTCAAAGgttataatttgaaaccacccata
aaacacgcggttgttttggctgctggatGGCTAGCTGTTTCTTTCGAGAA
TCACAGACCAATTTTGagaaaacccgaaaatttttatgaCCGACTGACTC
Accttttagacccaacgaggacgcgaaaatgaagatatttgtgattgtca
CCTAATCGAACAATCTGGaagctcgattagtttgattgatCAAACTCTAA
TCGTTCGAtcaagttcgattagttcgattaaaaTATCCGTacgattagtt
cgattgatcgggtctggttttGCACGGGCGTGCAATCACGCTGGATTACT
GGAGGCAAAAAGACTTAATTTGTTTTTATGAAGGCGAGTGAACATCGATC
AAATTTTCGATAAGTACTTGTTTTTGTATCTCTTCGAAATTTATGAATGG
TAAGCCTATGTACCTCTTAGAAAAGAGACTTAAAGCTCTTTTCAAAAGTC
CTACCAGAGACTTCCTCACAGCAAAAAATTTGCTTGCCTCCAGCTAATGG
TATGGTCTTTTTGCCTCCAGAAAATCAGGCTGCAAGTCACGGCGTGAGTA
AACAAATGACTTATCACAAAAGCCGTCTATTTTTCTTGGGTATATATACC
AGGGGATGTCGATCGGTTATGATCAAATTTGATCGACTTAGCTTCGATTT
ATTTACGATTGGTATTGCTGTTTACGCGACCAACNAAGTGATTAGTCGAA
TCAAACGAAGTCGATCAAAGTGATTGTCGAatcaatcaaagtcaatcaaa
acttcaaaaaaatgtaaatctcCGATTGATTTCGATCGGTTATGATCAAA
TTTGATCGACTTAGCTTCGATTTATTTACGATTGGTATTGCTGTTTACGC
GACCAACTCACTTCAAACTGATTTTTTAATCGAATTAATCAAACTtgatc
gaacctaatcgaacgatTATATTTCGATTAGTCAAACTAATCGAGCTTcc
agattttttccaaaattgtgagtgttcgattaagttcgatcactAATTAC
GGTTCGACTAGTTCGACAACCTGATTTGTTCGATTAGTTCGTACCATTCA
TCATTCATATTCAAAGTCTGACCTCAAAGTGAAAATTGGAATTCAAAATC
GGGAAAACTATTCCCGATATCACTTTCCCAAAACACTCCTGGTAAATTCA
TGCCAGCAACGCTATCAGATCGGGTGCATCTGCCGGGCGTCAATAATTAC
CGTGCATGTTTAAAAAGTTTGTTCACGTGGCATGGACGCTGGCATTCATG
CGGACTAAATATGGCGGTAATCTAATATATGTTCCGTtggcgtcgcccga
ccgactcaccttcaaaacataaatcccGAGTCAGACGAGTCGGAAAAATG
TTGGAAATTTCTAAGTCGAAATACGACGAcgcggtagggccaatacccCC
GTGAGCCAAAAATAAGGTCCACTTTTTAAGGCTAACACATGCGCGCGCGC
ATTTAGTTTGgtaaatcaaagatggcggcaagagATTTTGGAtttactag
atttaaaaaacccgacaaaatttactaGCGACTGGAATTGAAGATATTTT
atgacgcgaacggaacatattttagattgcCGCCTATCCGGGTGAGCTAC
ATATCTGGGTGCGCGAACCAAATATCCGGGAGGGGCAACTTTACACggtc
aaaaataagaaattatgttttctttcgactttgttttgtttttgcccgAG
TGACTCGGTGACTCGTGAGACCGGGGTCCATAAAGGAGAAATTGATAACA
ACATTCAAAACAATCAACAACAACCCCAACAACCTGCTCCCCCTGCTGGC
GCTGCTGTTGACCCTGATTCCCTGATGGGTGGAATATATCAAATTGGAAG
GAAGGTGATAAGGATCTGACATGGCTTGGTGATTTTGCCGGAGAAGAAGG
CTTTTTAATTGACATGCCAGAGAATGTAACTGAGCTGGATTTAACGGATG
ATGTGCTTCAATCAATCACCACTGAGACCAATAGATATGCCAGAACCTAA
CTGGACAAAGCCGATGAACATAATAGATTGAAACCTAATTCCAGATTCAG
ACAATGATCAGAAAATGGtcgctgactctttttaaaaagcgttgatgaca
tctttgagttgtgttttcaacgacgcaaaaaaaaaatcaactttgaatTT
AATCCAAGATCTTAGATTGTTGTCATGGTTACtgttctctgcgttgattg
cgcgctcaGTATaatctcgattggtcggcacagttttgaaaaaactttcg
taTAAGCATATGATAAGCATAATGTGAGGCTAAAAAAAAGTTTGCTAAGC
TTAATGAGCCTCAGCCAAAATTTCTCGTATGCGTATAAGTACTTTAAgga
cagaaactttcgcaagcagaaactttcgcctttggtaagaaattaaacct
gaaaaacgcgaattaacttttcataaaaaagggttgctgatacaggggtg
ttttcATAGGGCAATTTCCCAATGGATTGAAActttaatgtatttttttc
cAACAGGGACCTCGACAAAGATGATTTCCATCGGCAGCACCGGCTCTGTG
GTCTTCTTGGTAATATCATCTGTTCTTCATGATGAGTTGAATGTGGTGTG
TTTTATGCATAAACCTCAGCATTGCTTTCCCAGTGTCGTTTGAGTGTCAT
GGTAaacgccatggcttggcagtTCACGTATGTAAAGTCACAGTctctgt
cagcgccgtgattcctactcctttgggactaggacccattccgatacATT
CTGAAGTTCGGGGAAAATGTAGTACATAGCGTGGTTAGCAGGGAGCAGAA
GGGGCTGTCTTCTCGTATGGCGGTTTTTCTCAGGGGGTGTCGAAATGTTG
CGCTATAAGGCCTTTCACAACAAAATTCTCAGGgccattttctttttaaa
tccaaaaaatatGGTAGTTTTTCGAAAAAAGGGAATATTGGTAGAGAAAT
ATCCCCCCTGGTAAAGAAAGTGCGAATTTGTCAACATTTCAACATTTTAT
CTCCAAGTGTTGGTCACCACACCACTGGTAAATGTTTCATCAATTTGGTT
ATTTATTGGCGAATTTTCTTTGAAGAAATCCTATTGCGATAAATAATATG
AATCATATTAATGTGAAGGTAGGTTCGGACGTTTCAAAGAGCCATAAATT
GAATTTAAACCAGTATAACTTAATTATCCGAAATCGTAAACGAACTAACT
TCGACCTGCATTTTTTATACGATTTTATTCAAGATTTCAACAAGTTCATG
TCTAGTGGGAGAAATTTTACAATTGATCGGGtatgtaatttttttacatt
gaatacGGTGTACACAGGTGTACACATAAAAATAATTCTTAAGAAGAGAA
AGATTTGATTAAAGAACTACACACTTAATAATCTACTGAAATTTTTTCAT
AGatcaaatttcaaagaatttgCTGGACATGCATATACTACAGTGATGAC
CCGTGAAAGAATCCAGGgtagaaattattattttaaaaaatgtgtTGCTT
TTCCATACATAAACCTCGCTACGTTTTAAACGTTATTCTAAAGGCCGTTA
CAGTAAAAAGTGtcataaaatataattaaaatgaTTGATCCTCCTGAATA
TTTTAAATGTAAAGTTCAAACGCAGCagcgttttcattttatttgagtaa
aattcaaaacatataatCAGACGTTTCGGTGTCATCCGATCACCATCATC
agtaaaattgaaatgaaattctgTCATAAAATATCATTTCATATTTTAAG
TTGAAAAcaattttaacttttgttttagacGAAAGGCATCATAACCAAGA
AGAAAACGAGCTGCCGAACGAGCTGCTAATTTTTTTATGCATAAAGCTTT
TTATTTTAAGGacaattttttattatatttccaATAAATCATAAAAGTAT
GGGATCTTTTTTTCATTGTCTCGTAAAAGTTTGAATATTAGAAGGATGAG
AATAGTAAAACTCAAAATCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043228TCONS_00043228Clytia hemisphaericatranscript
TCONS_00043229TCONS_00043229Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004034supercontigsc0004034:1361..7781 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.09	0	0	0.2	0.32	1.34	1.23	1.17	0.47	0	0.62	0.68	0.41	1.1	2.61	4.32	3.07	2.69	2.48	1.98	3.16	0.51	1.36	0	0.14	2.67	2.72	1.82	1.18