XLOC_022075 (gene) - C. hemisphaerica

Overview
NameXLOC_022075
Unique NameXLOC_022075
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001607:27902..35087+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022075 ID=XLOC_022075|Name=XLOC_022075|organism=Clytia hemisphaerica|type=gene|length=7186bp|location=Sequence derived from alignment at sc0001607:27902..35087+ (Clytia hemisphaerica)
attttagtcacgtgactctggtaggaaatccttccaaagatgagcttcac tttttgaacaaagctgcaaatctagcccttcgggctttacagatatctgt gcgtgggaccagttggtttcagaaagtagaaggtataaaataaattttat atttcataGAATCCCTCTAATATGACTGACAAAGTATCCTCTAGTGATAT TAATCAGACTTCAAATGAAGTTAATATTCAGACTACTATGAAAGTTGATA AAGGAAAGACTTCTCTAAAAAGAGATTTAAAAGGAAAGACTTCTCTAAAA AGAGATTTAAAAGGAAAGACTTCTCTAATAAGAGATTTAAATGAGAAAAG TGAAATAACAGATATCCACTTTTTGAATGCTTGCAGATTGCAAAGCTCAG TTTATACTTGTGCTGTTGACTCAtttcttgaaataatctttATTATTCTG AGAGAATTCTTTCAGAACTTAGAgctcaaaagtgaattttttagaCTAAT TGATACGTGTTTAGAACAATATGATGCATTATTGAATTTGAACTATTATA ATGATGGAAATGTTAATAATGAAATGCTCCTGTCTCAATTTCGTCAGCCT GTTTGGGATTTCTTAGCTGAAAAATGTCCATCATTTGCTAATCGTGATTG TAATGCGcagttttcagaaattttttcagaCAACTACATGTTGTGTAACA TGAccgatgaagaaaaaaatatattccgcGTAGGTTATACATTGAAAGGT CAATGTACAGATTGCAATAGAGTCTTATCTGCTCAGGATTATGATATGCT AAATTACATAACAGGGTATCATTTAAGCTTGTTAGACAACATTAATGATT GGAAAGAACTTTTGAATCCACTACGTGAGAAAAGGTTGCGCTGCACATGT GGCACAATTTGTGAAGACTTATTTTTAGATTCCTTTACACATCCAAAGgt ttttttagttgaatttcACTCAGATATAAatcaagttatattttttgatg agcAAATTTTGAttcaaggaaaaaaataagttcTAAAAGGATTAGTAAGA AATCAGGGGAAACACTTTGTATGTGCTGTTTCTAAAAATGGGCATTGGAG TTATATAGATGACTGTAAAGAATACATTTTGATTTATAACGATTTAGCAA GTCTTTATAATAGCCAAAAAAATGGCTGGGTTTTCTGCTTTTATGTTAAA GATGATGATTGTAACAGGATATCAGATGCCTCTGAATCAAATatacattt ttcagtttctagACCAGTTGGTAAAAGAAAAAGTTGTGATTCAAAAGATT ATCCGTTAAGAAGCAAATTTAGTAaaggaaataaagaaaaatctgaaatt gATAGGGATTATCGTGagaagaataaagaaaaattgaaacaagctAAGAA AGAATATCAtgaaatgaataaagaaaaagaaaaagaatatcgtgagatga ataaagaaaaagaaaaagaatatcGTGAGATGAATAAAGAGAAAGCAAAA GAATATCGTGAAATGAATAAAGCGAAAAGTAGCAATTACGCGAAAGAATA TTATGAAAGAAATAGAGAATATATAAGAGCAAAGCGACGTGAGAGGTATA ATACAAAGAAGAAAACTGATGCTCATAGcaataaaaaattgaacaagAAA TCCAAtgagatttttgaagaaaagaacaAAACTGATGATTGTAGCaatga aaatttaaacaaaaaatccaataagacttttgaagaaaagaaaaaaagtg atgcTTGTAATGAAAGATTGAACAACAAATTCaataaaagtttagaaatg ACTATAACTCAGTGCAAAACGTGCAAAGAAGCTTGGCCATTAACAGCGTC GACAAAGTTTACGCCAGATAATTATGAATGTACAAGGTGTAAGAAAGAAA AATGCTTACCGAAAAAGTTTAGCGAAGAAAATGATATGATACCTAGCACG GTCCCAGTAGAGCTTCAAGGTCTTACGCAAGTTGAGGAAATGCTGATTGC CCGTGCTTTTCCTGTTATTCAAGTTTATACGAAGCCAAATGGTGGACAAA AAGCCTATAAAGGACATGTGTTAACTTTGCCACACGATGTTCAGAAAATT GCAAATGTTTTGCCAAGATATCCCAGAGATATACCTGTTAtagtttttaa atttgatggGAAGGATAATAAATCTAAAGAGCTCAGAGTACGTAGACAAA AGGTTGTTGATGCTTTAAAGTGGCTAACCGGTAAAAATGAGAAGGGTGAA CCAAACAACATCAGATACCAAGATGTCACTATTGATGAAAATAGATTTGA TAGTTTACCTGAAGATGATTTTCTTAAAATGCCTATGaatgcaaattttg aaaattatgaaaaagatatttttaatgatGATGACTGTTGTAGTGATGAC GAGGTTCTTCCTGATATGGGTCCTATTCCTgaggaaaatgatgaaaaagt tTATGACTGTAATACTGAAATGGGAAGTTTTAGTTTTATTCCAACTAAGA TTAAGTCCAAAATGGAGAAACATATTTTAAATGATTCAGTTCTTAAACCG GAAGCAATTGATGTTGGAAAAGAACCATTAAATGAGTTCACCACTGAGTA TTTAGCTACATTAACATTTCCAACACTATTTCCTGATGGGAAAGGAGACC CCACTAGATTTAGCACGAAACGGTCTATAGCAAAAAGTGATACAGAATCT TTCTCAGCAAAAATTAAACATTTGATTAAATTTGGTGAGTTTATTGATGG TACAGATTTGCGGCCCATTCTCGTTTTGGATTTTGGGCCTATAATATGCT ATATTGCAGACGACTTTTAGGACAAGGAAGCTTTTACTTGAAGCAAAATC CAGGAGAACCTAACTTGACTATTGATGAGTTACAAGAAATGATTAGAGCT GGTACTTATAGTAGtgttatgaaaaaacttttgagataTGCTAAGAACAT TACAGGAACAAATGCTTATTGGAGTCAAGCTAAAGAGCAGTTAAAAGCTA CAATAAACCAAGTTGGCTCACCAAcaattttttggactttgtcttGTGCA GAGTTTCACTGGCCAGAGTATCATGCCTTATTTTCTACTGATGAGAAGGC TGATTCAAGCACTTTACGTGAGAATATAATTAACAATCCACATTTGATCG ATTGGTTCTTTACAGTCagagttgaaaattttgttaagCATTGGCTTTAT GAGACTCTTGAGGCTGAATGGCATTGGTACAGATTTGAATACGCTGTTAT GCGTGGTTCAATTCATTGCCATGGTGTCGCCAAGCTTAAAAATGATCCAG GACTATGTAAACTTACACAAAAAGCCTTAGAAGGTCATCTAGCTGAGAAA AAATTGTCTGAAACTGAtgatgatattgaaaataatagAGTACAATTACA GGTTATTGTTAATGAAGGTAAAGCTGCAGCACAGCAAGTTTGTGACTATG TTGATACTTTGGTAACTGCTTGTAATCCATGCACACCTGAGGAACAGCTG GGTAAAACCAAAAGTTCATCCTTGTAAGAGAAAGCTTGAAGACTaaaatg atgatgattttgataATGATTATGCTGATTTAGTTAATTGTGTTCAGAGA CATACTAAATGTAGCTCAGCTTACTGTTTACGTAAGAATGACGGTGAACA ATATTGCCGGTTTAAATTTCCGTTTGAAGACTGTGATAAAACTTATCTTG AATTTGAAGAAGTAACTTCTAAGAAATACGGTAAGCAATTTAGACCCAAG ATTGTCTTGAAGAGAAATGATTCCAGAGTTAATAGACATCAGCGGCTGCA ATTGCAATCATGGAGAGGTAATTGTGATATACAGCCAATTATAGATTATA ATGCATGtttagaatatctcgcaaagtATGCTTCAAAAGCTGAAAAGATT TCTAATGTTGCTAGAGATGCATTTGTCTCGGTCCCGTCTCGGTAGTTGAA AATCTAAAGGGAACGGAACAAATGAGATCAGTTAAGCTAAAATTGATTAT AAAAGCTGTCGGTGAAAGAGATTTTAGTGTACAAGAGGTAGTGCACCATA TATTGTCACTGAAACTGATAAGTTCATCATTTCAAGTATTCAATGTCTCT GTTGACGGTTCAAGAAAGATTGAAATTAGCAATGAAGAAATTGTCACTGA AGCATCTACTGTAGACAATTATGCTAACAGAGAAAATCTTCAAGGTTGTG ATAGAACTATTTTGGAAAGTAATTTTGTTCAATTTGTATCAGACTACACA GTGACAAAAGAagttataaaaagaagaaaaaagcctGTAATTGTTAGAGC ATTCCCAAGTCCTCCAGCAAATCCAAAAGGACCTAATTATGGTGCTTTTT GCAAATATCAATTGCTTAAATATAAGCCATGGAGGTCCAGGACAAGTGAC GCTTGGGATAATTTAGATGGCGAAGATTCTGAAATGTTTTGCCTGAAATG GAATGAGTTTTTGCAAAGTGAACAAGGTCAAAAACTTGTTCCGAACTGGA GAAGAGAATTTCATAATGCAGAACTGTATTTTGAAAGATCAGAACATGAT GATTATGAGGAAAATGTCGAAGGTGAACGAGAAGAGTGGATGCACTTGGC TGACTTATGTGCTAATGATAATGATTCAGTTAATGATGAGACTAGTGTCA ATAACATACAATATTGGCAGAATTTTAGACAAAATTATACTGAAGAACAA ATTGGCAATATGGTTTCTTGGCTTGATAAGAAAAAAGCAGAAGTGTctga aagttttgatttatgcTTTGAACTTAATGTTGAATCACTCAATGAGGCTC AAAGAAGGGCATTTGACATTGTACTTGATCATGAGAAAAATCCACATGAA CAATTATTGATGATGATAACTGGATTAGCCGGAAGTGGAAAATCATTTCT AATTAATAATATTAGGGCATTATTGCAAGAGAAATGTATAGTTTCAGCCT ATTTTGGAATAGCTGCATTCAATGTAAAAGGCAAAACTTTGCATTCATTG TTAAAGTTACCAATACGAGGTAGAAATCTTAAAGATTTGAAGGGTCCTGC TCTTTTACAATTACAGGAGAAATTAAATGGTGTAAAATATATCATTATTG ATGAATACTCTGTTGTCGGCCAGAACTTACTAGGTTGGATTGATAAGCGG TGCCGTCAAGGCACTGGTGATTCAGATAAACCATTTGGAGGAATCTCAAT AATTTTAGTTGGAGATATTGCTCAGCTACCACCTGTTGGAGATAAAgttc tatatcataaaaaacCTAATGGTGAAATAGGCACTATGGGGTTTTGTATG TATAGAAAATTTACTAAAGTTGTTAAACTCACTGTTAATGAAAGATCAAA AGGTGATAATATTGAACAAGAAAAGTTTAGATCTGCTTTATACAGATTAA GAAATGGAGATTCAACTGAGGAAGATTGGCAGATGTTTTTATCTAGAACA CCTGCCAACTTAACAGAAGAAGTTGACAAGAAAAGTTTTGTGAAATTgtc attttcaaatgaaaaagtagcTTGTGATAATCACGAGGCTTTGATGAGTT TAAATGTACCTGTAGCACAAATAAATGCAAGGCATAGTAATAAAGCTTCA GCTAAGTTATCATCAGACGATATGGGTGGATTAGAACCAAAGATATTTTT GTGTAAAGGCTCTAGAGTGATGCTTACTAGAAACCTATGGACTGAGAAAG GGCTTTGCAATGGATCAATGGGTTATGTGAAAGATATAATTTATCAGGAA GGAGATTCAACTCCGAATTTACCAATAGCTGTTGTTGTTCAGTTTGATGA TTTCTATACAGGACCAAGTATTTGTGAAGACCAGCCTCGCTGTGTTCCCA TTATACCTTTAACTAATGCTTCAGATTTACATGGTTCTTCTCATGAGAGA CAGCAGTTACCTTTGAGATTGTCTTGGGCAATTACTATTCATAAATCGCA AGGACTCACCATTAATAAAGCATGGATTGATTTAGGAAATACTGAGAAAT TTATTGGGTTAGCATATGTAGCAGTATCAAGGGTAAGAGAGCTAAAAGAT ATGATAATTGAGTCAATGACACTAGAACGTTTAAGAGATGTAAAGAATAG AAAAGACTTTGAATATAGAAAAGCTGAAGAAGAAAAGATAACCGACTTAG CAAGATGTTTAAATGAAGGTGTATGAAGTTCAATAATAACCATTGAATAA GCCTTGAAAGGTAACCCTGtcataaaattacaaaatgtaaaTATAGAATA ATTTGTactattattttctttttctttttataatttagGAAATTTATCTC AATTCAAACACAATTCAACAAAGTAACTAAAGCCAAAAACAAAGGTAagt ttaaaattcttttttaatgtttcaatAGTTCTCGAACCACTTTTATTTTA TACTGAAATTGTATAGGATAATATAATGTCGTCTTTCTACGAAAATTACA AATAATCAATTTCGAGGGATTATACTATAGTTCTATAGTTTTAGAGTGTT TAAAGCTCAAAATAAAATCTCTCTTAGGCATATACTATTAATACGGTAAC CCAAttttaaataagtttttttttctcattcagGTTATTTTCACAACATT CAAATCGATCTGAAACAGTAATGTATCCATGCAATATCAAACCATATTTC AAAAACGTTTGGTTGATTTTAAATCCTGTAATTAATGTTGTCCATAATAT GATCAAATTGTAAAGGATATGTACTTTTAGAAGTAAATTAACGTTCGTTA TTGGCACCTTGCTTCTGATTAAACCTTTCATTGAATATAGTATTGCAGTC ACGTATGAAATTTATTAACCCCCGTTGCAGCCCGTTGTCATGTTTTCCTA TTAATGTTCTGGATCCTGTGTCACCTACGCATGTTATTGAAATAGAGTTT AACAACGATATGCATTTGCTGATGACCAAGATATATTTTCTCAATCTTCC AGTTAAAAATTGTGGCTGAATAAAGTATATACATTCTGGCTTAAACATGG ATATTATTGTATTCCCTGGTTAACatcaaaaatacttacaaattGCTGCT GTTCataaatttttgttatttgCTGTTATCATTATATGACGTTGGTTTTT GATTGCAAATGGAAGTTGAATTGTGTTAATAGACAATTTTTACTAGTATT TTTGAATCAATTGCAATTTTCATTTGTTGAATTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037278TCONS_00037278Clytia hemisphaericatranscript
TCONS_00037279TCONS_00037279Clytia hemisphaericatranscript
TCONS_00037280TCONS_00037280Clytia hemisphaericatranscript
TCONS_00037281TCONS_00037281Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037281-proteinTCONS_00037281-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001607supercontigsc0001607:27902..35087 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.77 1.45 0.51 0.71 8.34 4.13 11.48 13.02 9.07 6.88 5.36 8.39 9.01 7.58 4.84 5.48 5.62 6.13 6.1 6.83 17.87 16.93 7.26 8.48 3.15 6.1 7.05 6.73 5.64 3.84