XLOC_018428 (gene) - C. hemisphaerica

Overview
NameXLOC_018428
Unique NameXLOC_018428
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000937:5186..10463+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018428 ID=XLOC_018428|Name=XLOC_018428|organism=Clytia hemisphaerica|type=gene|length=5278bp|location=Sequence derived from alignment at sc0000937:5186..10463+ (Clytia hemisphaerica)
agtattttaaattttgtggtTTTTAAATCCTACTTTATCTCTTCTTACAT TCAGTGTAAGGTAAGAGATTATATTTAGAAACTGACTGCTATTTATACAA GAAGTAAATTGCGGTCGATTTAAGCATAATGTTTAAACGTTTATGTCTTA GATCAACAAAAAGGAGCTCTGAGACCGATGCTAATGAATCCGGTGATGAG ACTCGACAAGCACCACCCAAACGTAGACGATTTGAGCTTAATAACGAGAA TGAAGCTGCTTCATGGGAGTTGACTGAACCTATGAAGTTGTACATAGAGA AATACATTGCCACTCATGTCCAAGAAAAAGACTTGAAAGAGCAGGTCTAT AGTGAACATCCTGTCCCAGCTAACCTAAAAAAGGTGCCAGAATTGGACTC TTATATGAAGACATTATTGCAAGATAATTCAAGATATCAAACATTGAAGT TTGAGAAGACTTTAAAACATTTGAATGATAAGATACAAGCTGTTTATGGC CCAGTCTCAAAAATCTGGGCAGCTTACGAGGAAGAGAAAGAGAACTGTAG TGAAGAGGAATTAGAAGAAGGCCGGGAAAAAGCACAATGCTTCGAACAGG CTATTATGCTTCTTGGCCAAGTGTCGAACTCAGTGATGTATTACCGCAGA GAAAACGTCTTGAGTACACTCATTGAATCCTCAGCACAAATTAAAGAAAT ATTGCAGAATCAATCGAAAGACATGAATGATCAATCCAATTCCAGTCTAT TTGGTGAAACCTTCGAAACGAAACTAATCAAGGATTCCAAAGCTCTGAAA AAGTCAGAGGCATTCTTCACCGCCCTGAAAAAGCCGGCAAAGACACAATC CTCATCTGCTACCGCTGCCAGTTCCAACCAGCCCAATCGCAGGGGCTCCT TGCTTAGAGGAGGAAGAAGCAGGGGGCAGTTCTCATTTAGAGGTAAGACC TCATTCCTTTCAAAAATTAGTTTGTCCAAAACCAGAAAACCCTCAACTGA CAATAACCTGTCTTCTAGACTTGGGAAATCAACATCTTTTGTCCCATGTT CATCCCTCAGTAAAAGATTTATTTCCCCAGCAGTTAATTCCAAACTTACT TCCTGCcgggaaattgaaatttttcagccAGAACTGGGAAGTCCTAACTC AGGACCCCGCAATTCTGCAAGTGGTGAATGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNAGACTTGGGAAATCAACATCTTTTGTCCCA TGTTCATCCCTCAGTAAAAGGTTTATTTCCCCAGCAGTTAATTCCAAACT TACTTCCTGCcgggaaattgaaatttttcagccAGAACTAGGAAGTCCTA ACTCAGGACCCGGCAATTCTGCAAGTGGTGAATGGCTACAAGATACCATT CACATCCGTACCTGTTCAGAACAAATTTCCCCATCAACCTCCCATGAAAT GGGAGGAAGAGTTGTTGATAGAAGCAGAGATCCAGAAAATGCTACAAAAG GGTGCAATACAAAAAGTACAATCCCCTTCTCCAAATCACTTCCTAAGTTC AATCTTCCTGGTACCAAAATCAGATTCCGGTCACAGGCCAGTCAtcaatc tgaaaaatctaaacaaatatGTTCCCTATCTTCACTTCAAAATGGAAACT TTGGGGCTACTGAGAGAACTGCTGGTAAAGGGAGATTTTATGGTCAAATT AGACTTGCGAGACGCATACTTCAGCGTCCCCCTTCACAATCTTTCTCGGA AGTATGTAAGTTTTCGTTGGAAAGGGAAAATATACGAGTTTCTATGCCTT TGTTTTGGCCTGGGTCCTGCGCCAAGGATTTTTACCAAATTGATGAAGAT TCCTATAGCTTTGTTAAGACGGCTGAACGTTCGCCTAATTATCTATTTGG ACGACTGCCTATTGATGGCCTCATCGATAGAGGAACTCCTGATGGCCAGG GACACCCTCGTATTTGTACTTCAACACTTGGGGTTTTCCATAAATTTCGA GAAGTCGGTAATGGATCCAACTCACAACATTCGCTTCCTAGGGGTAGAAG TGAATTCTCTAGACATGATAGTGAGCCTTCCCCAGGACAAGGTAGCCAAA CTAGTTGCCCAGTGCCAAAAACTACTAGTACCCCCAAAGGTTTCGTTGAG GGAGTTAACCAGTTTGTTGGGTCGCCTCTCTTCTTCAGCTGTGGCAGTTC TGCCAGCCCCCCTTCGTTACAGGGCCCTTCAGAGGTTCCAGATACAAGAG TTAGCATGTCACAACAACTTCGAGGCATTAGTTGTCCTGACGGAAGAAGT GAAAGAGGAGTTGGATTGGTGGATTCAGAACTTAGAACTTTCCAATGGGC GTTCTTTAATAACAGCCCCTCCTCAGTTAATAATAGCTTCGGATGCTTCC AAGGAAGGCTGGGGAGCATTTTGCAAGGGTCAGGAAACAGGGGGCCCGTG GTCATCTCGGGAGGCAGAAATGCATATCAATGTTCTGGAACTGAAAGCAG CAAAACTGGCGATTCGTTGCTTTCACAGGGAGTTCCCAAATATCCAGTCG ATACATTTGCAAATGGACAACATCACAGCCCTAGCTTACTTGAAAAAGAT GGGGGGAACAAAGAGTCAAGCCTTAATAGATTTGAGCAAGGAGATCTGGG ATTATCTACTAGACCACCAGATCACGATTACTGTGGAGTACCTCCCTGGA GTTCTCAATGTGGAAGCAGACAGGCAATCTCGGAGTGTGAAGGATTCAAG CGAATGGAAATTAGACCCTCACATATTCAAGAAAATATGTCTGCTAAGAG GATCTCCGGACACAGACCTGTTTGCTTCCAGATTGTCTCACCAGGTTCCT CTATATTTTTCATGGAAGATAGACCCTTACAGCAGGGGGCAGGACGCCTT CCAGGCGAGCTGGACACAAATAAGGGGGTATGCATTTCCTCCATTTTGCC TCATCGGGAAAGTTTTAAAAAAGGTACTTTCAGACAGAGCAACCATTCTG ATAGTAACTCCTGCTTGGCAAACCCAGTCATGGTTTCCCCAGCTCCTTCA GTTATCAATCCAAAACCCAATATTACTCCCGCAAAGGCGAAATCTGTTGT CAAACCCAAAAGGGGAATGGCATCCACTTCTGCTGAATCAAAGTCTCCAG TTAGTGGTCTGGACAGTTTCAGGGATAGAATCGAAGCAACAGGCATTTCT AAGAAAGCTTCCTCTCTCATCGCAGCTGCAAGAAGGGACGGGACAGTCGC TCATTACCAATCGGCCTGGAGTAAGTGGAGTGGCTGGTGTGATAAAAGGC AGATTGATCCTATTCGATCTCCTCTAAATTTTGTCATTGATTTCCTCTCT GACTGCTTCGATGAGGGCAAGGAGTTCAATACCATTGCTGGTTACAGATC TGCTATCTCAGCTTATCATGACCCAATTGATGGGGTAAGGGTTGGGAAAC ACCCTCTAGTTTCTTCATTGATGGCAGGGATTCACAACAAAAGGTTTCCA CAGCCCAGATACACTTTCATTTGGGATGTTGAGAAGGTCGTGAGTTATCT TAGTACAATACCTTCACATTCTGAGAATGTGTCAGATAAACTGTTGACTT TGAAGCTGACTATGCTATTAGCCTTGACTTCAGCGGCCAGGGCTCATGAG ATTACATATTTAGATGAACGCTTCCTTGTTAAACATCATTCAAAGTATAC TTTTCACTTTGGGAAACCCACAAAAACTGCAAAAGTGGGTAAACTTAGAC CCCCAATAGAATTTCACCATTTTGAAAGTGATTTGAATCTGTGTGTATGC CGCCACATTGATTTGTACTTGGAAAGAAGTGCTTCATGGAGAAGGGAGAA AGGGCAATTATTATTGAGTTTCATTAATCCACATGGTCCGGTTAAATCCT CAACTGTTTCTGGATGGGTCCTTGAGTGCTTGTCACAATCTGGTGTAGAT ACTGCAACATTTAAAGGCCATTCTACTAGATCTGCCTCAACCTCTAAGGC CAGTTCTCTTGGAATTCCTCTAAAGGAAATTTTGAAAAGGGGATATTGGG CCAATTCTACTGTGTTTGAACGGCATTATAAGAAGGAAATGTCTCAGGAA ATCCCTAAGTTTGATGCCGCCGTTCTCGGGAAGCCGCTTTGAACAGAGGT CTTGAGAGATGACTTTCAGACTCAAGGCCTGAAAGGGCGTATACCAGTAT TAGATCGGGCGGAGATTTTATGCAATGAAATTGAGGATTGTGCAAGGGCC CGAAGGGCCCGCAGTGCAATCCcgattttataaataaaatcgAAGCCAAC GATCTAATACTGCCCACCCTCCTTCCCCTACTAACACCTATCCTCATGAT TATTTTCTTTCAGGACGATACTTTCGAGGAAGACGAGGACGTGGTGGTTA TCGAGGAAACTGATTTTAGCATTTTATGATATAGAATATATGATATAGTC GGAAAAGACTTTGAGTTACATATTTGTGTCATTTCTTGTTTTCACTAAGT TGCTTTGTTTGCGCAAAATTGGTGCTTTtaattatttcaatattttcgac CATTACACATTATTAAAACTGAAATAATAACTTTATAGTGGTCTTGAGAT TTGACTTTCAGACTCTCGGCGTGAAAGGGCGTATACCAGTATTAGATCGT TGGCTTcgattttatttataaaatcgGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00031971TCONS_00031971Clytia hemisphaericatranscript
TCONS_00031972TCONS_00031972Clytia hemisphaericatranscript
TCONS_00031973TCONS_00031973Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00031971-proteinTCONS_00031971-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000937supercontigsc0000937:5186..10463 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18 1.23 1.22 1.1 143.2 118.63 43.59 47.5 18.93 27.13 15.36 13.88 12.62 12.24 8.57 9.9 12.46 8.67 6.84 11.1 8.23 9.64 5.41 6.27 11.86 21.32 8.91 5.36 7.74 5.86