XLOC_018124 (gene) - C. hemisphaerica

Overview
NameXLOC_018124
Unique NameXLOC_018124
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000903:55744..61445-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018124 ID=XLOC_018124|Name=XLOC_018124|organism=Clytia hemisphaerica|type=gene|length=5702bp|location=Sequence derived from alignment at sc0000903:55744..61445- (Clytia hemisphaerica)
ACTACTGAGGAAGCTGATAAATTAAAGCAATTACTCAAAAATGATTCTGA TAAAGTCAAATTGTTGGAGCTGATTGCAGATTTGTCTAGAGTTGGTGAGT GTTATCAATATGTAATGTTTTGACTGTGAAATCAGAATAATTCAAATTAT CACAATTTTAAAAGATCTGTCTGTAAAAACTTTATAAATTGCTATGAGAG CACCTACTTTTAAATAAAAAGTAAATTCATATGATCTATAGAATTGTTAT CTCTTTTTTTAATCTTTTTCTTAGAATCTAACAGACAGAAGTTTACTGAC AAAACTTTTTTTGAAGACTTGATTACCTTTGTCAATAATGACAAGCCAGA TCTGGTATTGCAAGCTATCAGATGCTTATGTAACATTAGCGCTGAAAACG GTAAACCAATTTCTTTATTATTTTCTTTTCAAAGCTAGCTTCAATTGCTA CTGTTCAAAACTAGCTTTAATTGCTACCGTTCCTTCAAGATAGAGCTAGA TCATTCAAATTTTGTATAGGCTTTGTCTCAGAAATTATTTCTGTTGGTTG AAACCTTTAGTTGATATTATTTTTAATTATTAATTGTACATAAATAACTT CTCTATTTGGAACTTCTAGAGGATGCAAAATCTATATTCTGTGAATTTGA GGGTGTGAAGAAACTCTTGTCGAAAGCTGAAGAGATTATTGATAAAGATG ATGCTGCTTGGAACAACTTGGTATGTCCTGCATGTAGTTGTATTCAAAAT CTTGTTGTTGACAGTGGTAAGTGTAAAATGCGAAAAATGTCCCGTACTCA AATCCAGGACTGTAAAATTTTAGAATAAGATTTTCTTGATAGGTGCTATG TAGTAAATAAATGAGGTTCTCTAGCATTTCGTCGAAAATAATTACCATTA AGCTGAAAAAGTATCTTTAAAATTGTGGAAAACTCAAAATCTCTGGTATC ATTTTATGCTTCTAACGTTTTCAGACCTCTTTATTTTAAAAACATAACAT CAAAAGTTTTATTAAAGCAAAATTATCAATTCGTCCTAAAATCTTTCTTT TTTCCATAGAAACTGTCCATAAAGCATTTTTGAATGAAAATGCAATGAAT GTACTGTGGAGATATCTTGCAAAGTTTCATTCTAAAGATACAAAGATTGC ATCAGTCACTCTCTCAGGGCTATCTTCGTTAGGAGAAAATGGTATGTAAC TTTTTAAAGCACTTAGTCCCATCCTCCTTATTTTATAAACTGATGTATAC AGGACGGGTTTGGGCTTAAAAAAGTTTTCAGTAGGAAATTCGAATTTAGC GCTGTCCTTATGATGATCAAACTGACTCAAAACTACACTTCTTTATCTTT TTATAGATTATGGTTTACAGAATTTATACGATAGTGGTGTTCTCAAACTT GTTGTTAAGTTGCTTAATGTAGCATCTGATGAGACAACAAAACTGATCTT TCAAAATCTCTTAAAAGAAGTATCTAACCAAGGTAGTTTTTTTTGCTATA AATAAATCTCAATGCCAATCATTATATCATCTCACATGACCCTCTTATCT TTTTTAAAACTCTTAACCAAGTCATAAGGAACATCTTAGTTTGACCTTTT GACGCCAAATCAAAGAGTCAGGATGATATGAATTATCACCAATATTAGTT TTAGATAATTAAAAGACCTGACGACTTGAGAGTAATTGTCGATTCCAAAA AAAATATAGCTTCCTTAGATGTATTCCAGATAATCTATACATAGGAAAAT CATCAAGGGGGGTTCCCTGTTGAAAAATTTCCCTAGGGGACTTGAGAGAT TTTTAAACTGGTGCTTTGTGCGGTAGTCATACACAGCATTGCACAATCAT ATTTAAATGTTATAATGTCAATTTTTAGAACCTGGTAAAAAGTATTTGAA CCAATGTGATAGTTTTACTGAGATTTCAAAGATCATTGAAAACAGGGCAA ACTTCAAGGAGACAGAGATTGATGATGTAACTAAGGAAATGGCTGATTTT GTTGTGGTATTAACCTCTGGGGGTACGTGAGAAAAAGACCTTTGTTGTAT GATTTACTGATTTTTACAGATAGATGCTTGTCTGTTTTTATCTAGTAGTG TGGGGGCAGGAGGGGCAGTTGCCTCCCCAGTTTGCCCAAATTTTGGTCGA TCCACCACGCTACTGTTTCTATCATGGAGTATTCGTTTGTGAAACAGAAT CAAGTCTGTTTCTGACATTTTTTAAGGGGCTAACTTTTGGGTAAGCAGCA CTTAATTTTGTGACCTAAACACTAGTCACTTTGGTGTCTCATTATCCTCC AGGCCTGATTATCCTCTATATGATTTGTTTTTTCTTCTAGAGGAAAGCTT TAATGTATTGAAGAAATCTGACCCAGACTTTTTGAAACGCTTTTCCAGCT GGATTCAATCACCCAATAAGCATATCCAAGTATCTGCTGGTTTGGCTCTA GGAAACTATGCTAGGGATGGTGAGAGAGAGCACTTCGTTTTATTTTCTGA TACTATTTGCTACTTTTCTGACTGCCTTAAAAATGTTTGTTTTCACCAGA AGAAGCCTATTGATATTGATGGGGGTGAGGTCTATAGAGAGCTGAAAAGT CAATTCAGTGGAATTAATTCTCAATGGTTTTGTCTTTCTTTTTAGGCGAA TGAATTTCCAGAATCTCTTTCATTTTTCAATGGACCTTGAAAATTCTCAT CAAAGTAATGTGGTTCTGTTAAAAAAGGCGGAAAGGCTAATGCTGATGAA TTAATTTATCTTATAATATATTTGCTTACACTATTAATTTATCCCCCATT TTACGAAGATTTAACTCAAATCAATTGTTATTTTAGAGGAGACTTGTAAC GACATTGTGAGGATTGGAATCCATGAAAATCTGATCAACGTTATGACCGA AAATTTGAAAGATGAAGTATAATTATGCTGCTTTGAGCAAATTTTGCCTT TAGTTTCTTCAAAGAAAATTTTAATACTAGCTTTCTAGGATGTGCTATAA TTGTTTTGATACAAATCTACTAAATATGAAATAATTCAATACTTGTACAA ATACATTTTGTTTTCTGATGTTAGGTTATTTCTAAAAGTTAGTGTCGTGA AATTATCTCATAATGCATTTTCTTTTTCAGAGCTTCAGTGATAGAGCACA AGCTTATGGAGCTTGCTTACGGAATTTATGCATACCAGGTAAGTTAAACT ATAGTCTTTTTGTAAAATAATTATTTTGAGTGAATCTCTATTCAAACCAT CACTCGTTTTAAGACGCCACAAAAGAATTAGCATTACGGGACAAGGGTGT CTTTAAGCTTTCATGCAATAATGCAATTTTGAAAAAGGAAAACCCTCGCA TTGCTCTATCAATTATCAAAATTTTGATGGCAATAGACAAGAGTAACCAT TATTGTTCCTATCATTACTGTTCTTTTTTTCTCTTTTCAGTCCACAATAA AAAGATACTGTACAAAGCTGGCCTACACACGATGGCCATATCATATATCA TGGAAAGTGACAGCCTAGCAGCTCAATTCAAAGCATTGGCAATACTTCGA CTCCTTGTACAAGGTATTGAAGAGGTTCTTACGTTTTAAAATTTCACTAT TGGGCCATAACACTGTGTTATACTTTAAAATAATCAGGTATGAAATGTTC AATAACAATAGAATGCAAAATTTGATGTAAGCACGCATAACTGGCTTAAA CTCATAGTTTACCACTTTACCACACAATTAAGGTGTAAAGTACATTCAAA TTTTTTTGGTGCAAATTTGATTACTATGAATATTATAATCTCACAGATTT CATTATCATTTTCAGACAACATTGAATTATCATCTTCAATCTGTTTGAAC AAAGCACTAGTGGACAAAGTATTGGAACTTGCTGGAACATCAGTTGTGTC ATCAGTACCTGCTGAAAGTCAACGTCTCCTGGCTGCTGCAATCAAGTACA GTAGTTCTGAAGGTAAAATGCTACACAAATTAAAAAGGCTAGGGCATAGA TTAACAAAACTGACTCAGAATGTACTGCATACTTCAAAATATATTTTCTC GTGGAATAAAACTGCATCTTTGATTATGTCATAAAGCTTTATGATTTTGA AAAGAAACTGTAGAATGGATTTCTAGGATCTGGTGATTGTACTAGACTAT ACAATATTGTTCAAAGATGTAAACCTGGATCTTTCTGTTTATCTTTTCAG TTACAATAAAAGGCATCTTGAAGAGTGCCACAGTTTTGGATACCATATTA GCTTTATTGTTGTCAGAGCATACTATCATGCAAAGTGAAGGTTTGATCGC TCTTATCATGATTGCTGCAAACATGCCAGGTATGTTCACTAAGTTTATGT ATGTGTGTTTTTCTGCGACGGAGATGGTAAGGTTCTAATTTGTCTACACC ATGACTGACTGAGGACGACGGTCAATCAGCATTTTTACCATCCTCGATTT TGTGGGTCGCAACTGCGGGTTGTTCCAAATCGCTTCAGTCATAAATTACA TAAACTTGCTATTAAATAGGGTGGGATAACTGATCCTGCATGGAAACAAT GTTGCTATTTTCTAGCGATTCACTTTAAGCTTTAAGGTTCATTAGAATTC ACTGATTTTATGGACATGCACGAGGTGCTTGAATATATTTCCGCGATGAG TATTGAAACACACTTTAAATTTATTATAGATTGTATAGACTTATTTAAAG AAAAAGAATGTGTGCCAAAAGTGTTCACATTGTTGAAAAAACCAGAGGTA CAAGCACAAACTTGCTTCAATGGACTGACTTGTTTTCAAGCTGTCATGAG CATAAGTAAGTTACCAGCTTTTTAATATCGTGCGTAAGCTTAGATCTTGC TTTTATTGGATCACCCCTTAGTAAAGAGGTGTAATCTTTTTCCTAAAACA AGGTTTCCAGGCATTTGCTCTAGTCAACAATATTCTTAAAATCTTTTAAA ATGTGTATCTGTTTGTGTTTTTGTTTCATGTTTCTTGTGTTGTAACTAAA ACGTCATACCAATAACTTTTATGTTTATAGTTAATCCGATGACTTATTTT GACCTACAAGAGATCATACTGAATTTGTTGTGTTCCATTTTCAGATGGAG GAAAAGACTTACTGGTATCCAATGGTGTTGATGAAGTTTTTGAGATTCTC AGCAAACATGGCGAAGACATCATCAAGAATAAGGCAACAGAAACCAAAGA GCTGTTAGATTCTCTTTAACAAAATACAAGGTTTAATAGGGAGCTCGATA ATTTTTCAATTTCAATTTTTTAATGAATATTTATTTAAAAAGTATATAGC AGCAAGATGTTTTGGAGAATGGTTAGGCAACATCTTTCTTTTTAAACAAT CGTTCAAACTCAAATAGAATCTAAGAGTGGCGATTTCGATGCGAAAATTT GATTTAGCATCCGAAATGACAATTGGAATTTATTTAATCCACTCTTAGAT ATAATGCTCTTTTCCGAGACATCTTGTATAGAATTCTTTTGTATTTTTTC GTTTTTACTATAGGTTAATCTAAGAAATTTGTAGAAATTAATTTACGGTT TTAGATATTGGAATCGTCATGATTTTGCCACAACTTTTTTTTATTTTTCG ATCAAAAAATTATATCTATTGTTTATTGTTTACCATTGATATAGCTAGGA TAATTTTTTCAATTTTCAAAAATCTCTTTGCATTCATTTTGATAAAGAAA GC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00031522TCONS_00031522Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00031522-proteinTCONS_00031522-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000903supercontigsc0000903:55744..61445 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAP1GDS1rap1 GTPase-GDP dissociation stimulator 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.89 33.77 4.78 1.99 60.81 43.94 37.4 41.37 28.51 39.36 17.62 14.22 11.05 8.88 27.87 27.41 44.3 29.96 5.08 9.14 12.88 11.06 46.09 42.51 10.26 13.18 31.15 17.59 46.23 37.36