XLOC_017492 (gene) - C. hemisphaerica

Overview
NameXLOC_017492
Unique NameXLOC_017492
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000825:57815..62246+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017492 ID=XLOC_017492|Name=XLOC_017492|organism=Clytia hemisphaerica|type=gene|length=4432bp|location=Sequence derived from alignment at sc0000825:57815..62246+ (Clytia hemisphaerica)
TTTATATCTTGTTTGCTGGATGAAATAAAATCAAGATAACAGAGTTTTAT
CCATTGTTGCACAACTCGAAAAGCTTTGCTTTGTTGTCTTGATTTGAACT
TTCTATCTAAAATTAAAATGGCTActttcaaattgaatttcttttaaacA
TACAGGAACAGATCAACATATTATTACTTATTTATGGCAGAAAATAATGA
TGGTGAGTAGCAGTGTTCCTCACAGCCATCACAGTCAAAGCGACCAAGAA
AGACAAGTAAGTAGTTTCTTCTTTgtgttcaacattttcattgtcACATT
TTGTCAACATAAGGAGGCGAGTGGTggaaaaacaagtttttgtgattgtt
ttttaacgtcctgtcagcaccttgaactgactacccaattcccctcacat
ggcatgggttgactctggcgaaggttcattcacttgccaagtgaaccact
gcgagtgggaatcaaacCTCAGTCCACAGTCCACAGCGCCTAATTTTTAT
GCATTTACAAGCATTAACCACTGAAAGGCATGATAGTAGATTGTGATCTG
ATTATGAGATAAAAGTCAATATATCAATCAGGAAgaactcaaatcaaaac
acaTACCGtaacaaaaattcactttcgtCTTTAAAATGTACATTTATTGC
TATATTCAGCTATATTCCATAAAATACACAGTGCAAAGGTTTATGATGGC
AGATAGCGCAATGTACTGgggatcaggtaacttgcatcagtggaggctaa
cgttttgcctgtatatttacataaattgtGGTGACAAGGCAAGTGACTGA
ATATgcctgaatatttgtggataaatctgaaaaagaaacactGACTGTCA
GCATCAAAGAAGAATCGTTTATGGTCCTTTGTTTCCAAGTTAtccaagta
agtaagtataaaaATTTGAACCTGGGAGCGAAATTGACTGATTATTAATG
ATTGAATTGAAATTTCATTGTTGTTAAGGTTTGGAAATtctgaatttttc
aaaaccaaTTTACTCTCGGAAATTCTGTGTCGTCCGCCCTCCCCCCCCAT
TCATGGACAAAacctggaatggcccattaaaATAtaacattaaatcaaaa
caaaaatggtagagtagagctgcgtagttcatttgttttgaaaatttgct
gctttgattgatcagtcatttgatggctatgcaagtttccctccactgat
gcaagttacccgacttcacgatATCACCTATCCATGGTACTCTCTTTAAA
GGTACACATCAATATTTGAATTAAGATTATTTGATTAATGTATGACCATT
ACTGCATATATAAAACACCATACTGTGTCTTAAAGTTTTTGGTTTGAGAC
AATGTTTGTTTGCTAACTCAGCTTTTTTGAATTATATACAAGCTCTTTAG
TACCGTCGAAGAGTGATACATTGCGCTTTTCTGCCATACTTTGCACAGTG
TATTTTACCAAATAACCAATATGTACATTTTAAAGACGAAGGCGAATTTT
TGTAAGGTTTAGATTGTAATTGATCACATGTTTCAATCTGTAAACAAGAG
ATTCAATTTGATGACtggaattttgagtaaaacAAAGGGAAAAAAATGAG
TGAAAAGTATGGCAGAAAAGTGCAATATATCACCCTTTGATGGCATTGAA
TAGATATGAACGTGAAGCAATCTTTGatcgaaaacaaaaagaaatccaaa
atatttgtttacctCAACCAAAAAGAGAAATAGACCGATATCtggtctga
tatgaaacatgaaaACCGATATCTCAATCTAAAAAATGAGTTTTATGTAA
TTTAAATTTACACAAGAATGATTTAAGACCTTAAAAAATTATCATGTCCA
ATCTTAAATTTaaccacaaaaaatattttgtccaagTACCAAGAAACCTG
AACTTTTCTAAGACGATGTCATAGAATCCCGAAAGCTCTATTCAATCTTA
AAGATTAATTAAAAATCTCTAAGATTAATAATAACCTCCTTtaaaaaaca
taactttttaatGGAACTAATCATAAaccaattttttagaatttaaaaga
aTCAAACTTTGTTGCTCGATAAATTTCTATTAAGTTTTGTTGTCATTAAA
CTTAATTGAACTCACAATTTTATATACCTGATTATTGAGTTTGATTGAAG
TAATCAATGTAATCGAACTAACAGaactaaaaaactgaagaaaTAATGCA
CATGATGTGCCTGTTAAACTGATGGCCACTACTCAAAGCTCTAAAGTCTC
TGCACACTAATTTACTGGTCGAACTTTGTGGAACTATAATATTTGTCAGG
TTTGCTGAACTTTCTCTGTTGTCATACTTTGCAGAAGTTCCTTGAATTTT
AATCAAACACTTGGATTTTNGTTTTCTGTTGTCATACTTTGCAGAAGTTC
ATTGAATTTTAATCAAACTCTTAGATTTTTTAAGACAGTAGTCTGGATTA
CATGATATGAGATTGATAATTGATGATTAAATGATTTGCAATATTGCAtt
cagattataaaaatcgGCAATGATAATCAAGGTTTGTTAAATGTCTAATT
AATATTTATTAGTTAATTTTATTGGGTGATCAATAGTGCTAATCTATCAT
TTATCAGTCATCTAGATCATGATTGCTGGTCAagaatttataaatttcaa
gaattttttgagTTGTAACATCTgatatttctgaaaaatatcatCCATGT
AGCATTATGTCTGATGTTTTAGATAAAaccaagaatgtttttttttgccc
ttGGGAATAGGCTTCagttacttttgaaaaacaaagtATTTTAGCTGCCT
TGGACatatataaaaagtattttgcaaagaaagcatgttttcaccatttt
ttttgCAACTAAATTTACTACTATTGACTTATCACCTTGGCTATACaaga
tatgaaattttgaaggtttgattaatttttccCGGGGGCCCCGGGAACta
ggtactaggtttgcgaggtgacgggtatgtccgagccgaaaatcgaaaat
caaccctttgagagacaaaattttggtgattttgggaccctttgagagac
tttttcctatattttggtccattttttccaaattttggtttgattttcac
caaattttggtcaaaattcttggaaatcgtgaccctttgagagagaaatt
tttgatttttGTGATTTTGGGGCCCTTTCAGAGAATAAcatttgaatttg
tacccctttgagaaaaggtacccttatggctcgcacatacccggcaccca
ttttgcctaagtacccccccgggtattttttctatttttctactTTCCTT
AACACTGCAGATCACTGGATAGCATCATTTTAATCactaaaacttttctt
ttaacATGAAtggatttgaaaaattgttatttATTTGTAAAGAGGATATA
TTCATCCCATGGAAAATTGTGAAGGTTGCTAAAAAcctcaaaattacaaa
aattcttTGTCTACACATCACTTTGTTTAGGTCTTGGTTTGATGAAACAA
ATTGTGGCAGTTAACAAATCACTTAAAGCTAAAGCAAAATCCAAGAAAAA
ATCAGAGATTTGCTTTGTTGAACTCAAGAGATCTGCTGAAACTGGTTAGT
ATATTTTGTTTGTGCGGGACAactgaaactctaaattttgtcATCAATAC
AGACCAAAGAGATTTATCcctgtttcaaacttttcagCCTGAATTTTGTT
GcacaaaaacttttgaaaggtTTAATTTTTAGCTAAGCTTTGTTGTCTTG
TTCAATTTTAAATGCATGcattctttctcttttttttggataATCTAGGT
CAAAGGATCTTCAAGCTGAAGAGACCAAAACATAACAATCGAATGAAAAG
AAGAATATCAAATACTGGTAAATGTGCAGTTACATTATTTTATACACTGG
GTAATATTGAGGTACCTAAATCTAAATAGAGTTGTGTGTGTTGtatgtat
tgaaatttcaactctttcttgttattttcatcAGTAATCACTGCAGATGA
GCAAGTTTTGGACATTGATGTAGAAAATTCAAACTGGCAAATTGCAGAAA
ATGTGGACACCATCGATAATGAATTAAATGACATAAATTCACAAAGTGAT
ACAAAAAGTAGGTATCATATCATCCCTTCTTGAAGACAATTAAGGAAAAa
acattgtttaaaattttcactgtTATAAGACTCTATGTAAGATTAAATCC
ACCCTCATAAAAAAGGgggaaaattggcaaaaaaacatttttggtgtTAA
TGTAACAGAGTAATAACGATCAgctattttaatttatttcagtgAATAGT
TGGTTAGAAACGCTTCTTAACTTTGTCAAAACAAAATAGAAGAAGAAGTC
ATGGTTCGAAAGATCAAGATCCTGCCAAGAAGATTGGGATTTGCTGAGGA
AGAATATTTGGAGGACAATGCAGGCTAGGGNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00030509TCONS_00030509Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00030509-proteinTCONS_00030509-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000825supercontigsc0000825:57815..62246 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.05	4.06	1.64	0.68	33.76	31.97	34.89	35.5	18.2	19.94	20.22	16.56	16.35	16.95	10.68	14.87	15.78	20.54	12.31	20.7	17.13	14.73	7.59	12.49	30.62	29.5	26.1	20.76	16.96	16.07