XLOC_013582 (gene) - C. hemisphaerica

Overview
NameXLOC_013582
Unique NameXLOC_013582
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000478:215609..223708-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013582 ID=XLOC_013582|Name=XLOC_013582|organism=Clytia hemisphaerica|type=gene|length=8100bp|location=Sequence derived from alignment at sc0000478:215609..223708- (Clytia hemisphaerica)
CCTGGTTTCACGTTTATGATTTCAGTTTGACAAAATTCTCCAGTCCATCC AGAAGGGCAGATGCATTCATAATTGTCGACCAAGTCTTTACAAACACCTC CATTTTGGCAAAGATTGTTTTTGCATTCATTAATGTTGACTTCACAATGT CTTCCCTTCCATCCATTTTGACATTTGCAAGCATATCCATTTGTCAAATC AATACATGTTGCATTGTTGACACATTGATTTTCCCAGCAATCATCAGTGT TGATATGACAAAATCTTCCTTCCCAACCGCTGATACATTGGCATTCATAT CCTCCAAGTTTATCGATGCATTTTGCATTATTTTGACATTGGTTAAAAAG ACACTCATCGATTTCAGTTTCGCAGAATCTTCCTGTCCAACCAGGTCTGC ATTGACAAGCATATCCGTTCAATAAATCAATGCAAGCACCATTATGCTGA CATTTGTGTCCAAGTAAACAGTCATTAATGTTTGTCTGGCAATAAGTTCC AGTCCATCCAGACTTACACTTGCATTGATATCCATCTAATGTATCCAAAC ACTCTGCATCATGTTGGCATAAATTATTGTTACAATCATTGATATTGACT TCACAATATTTTCCAGTCCAACCTGGTTGACATTTACAAACATATCCATT GAGAATATCAATACATTTTCCGCTTTGACATTTGTTGTTTGGACAGTCGT CAATATTTGTTTGGCAATAAACACCTTCCCATCCTTGTTTACATTGACAC TCATAAGCATTGACTTTATCAACACACTTGCTTTCGTGCTGGCATTTGTT AGATATGCAATCATCTATATTGATATCACAATATTGTCCTTTCCATCCAA CTTGACATTTGCACATGTAGCTATTGATCCCATCGATACAAGCTCCATTC ACACAGCTGTTGTTCAAACATTCATTGATGTTGATTTCACAAAACTGTCC TTCCCATCCCGGTTGACATTGGCATGTATAGCTGTCTATACCGTCAATAC ATTTTGCATTGTTTTTGCATTGGTGATTGATACAATCGTCTATGTTTTCG TCACAGTATGTTCCGTTCCATCCAACATTACACTTGCAAGTGTAGCTATT GATACCGTCAATGCAGTCTCCATTGACACAGGTGTGGTTGACACATTCAT CGATATTAGTCTCGCAGAACTCCCCTGTCCATCCTGGCTTGCAATGACAT TTATAATCATTTATTAGATCTTCACAAATTGCGCCATTTTGACAAGAGTT GTTTCTGCATTCGTCAATATTTATCTCACAATACTTTCCTGTCCATCCTT GGAGGCATTGGCAATCATATCCGTTGATTCTGTCAATGCAGGTTGCATTA TTTTGACATTTGTTATTCGGACATTCGTTAATGTTTTCCTCGCAGAATCT TCCAGACCATCCTGGTTTACATGTACAAGTGTATGAAGCAATTCTGTCGA CGCAAGTTGCATTGTTCTTGCATTCATTTTTCACGCAGTCGTCAATGTTC ACATCACAATATTTGCCAGTCCAGCCCTTTTGACAGTTGCAGGTATAGCT ATTGATTCCATCAATACATTTTCCATTGACACAACTGTTGTTGATACATT CATCGATATTATGCTCACAGAGCTTTCCTGTCCAGCCTGGGAGACAATTA CACTTGTAGCCATTCACCAAATCTGTGCAAGTTGCATTATTTTGGCATTG ATGAGTTTTACATTCATCAATGTTGACTTCACAGTATCGACCAGTCCATC CAGGTTTGCACGAGCAGGTGTAATTTGCAATACTGTCAATGCATTCTGCT TCATTTTGACATTTGTTTCCTTCACATTCATCAATATTTGTTTCACAAAA CTCTCCAGTCCATCCTGATTTGCAATGGCACTTGTAGTTGTTTATCCGAT CTTCACAGGTTCCACCATTTCTGCAAGAATTATTTTTACATTCATTAATA TTTGTTTCGCAATGTCTTCCTGTCCATCCTGGTTTACACCGACATTCATA ATCATTGATCTTGTCAATACATGTTGCATTGTTCATGCAGTTGTTGATTT TGCACTCGTCAATATTTCCATCACATAATTTTCCAGACCATCCTGGTTTG CATGTACAAGTGTATGAAGCAATACCATCGATACAAGTTGCATTGTTCTT GCATTCATTTTTCAAGCAGTCATCAATGTTCACATCACAATATTTGTCAG TCCATCCCTTTTGACAGTTGCAGGTGTAGCTATTGATTCCATCAATACAT TTTCCATTGACACAGCTGTTGTTGACACATTCGTCGATATTATGCTCACA GAACTTTCCTGTCCAGCCTGAGAGACAATTACACTTATAGCCATTCACCA AATCTGTGCAAATTGCATTATTTTGGCATTGATGAGTTTTACATTCATCA ATGTTGACTTCACAGTATCGCCCGGTCCATCCAGATTTGCATGAGCAGGT ATAATTTGCAATACCGTCAATGCATTCTGCTTCATTTTGACATTTATTTC CTTCACACTCATCGATATTTTTCTCGCAGAACTCCCCTGTCCATCCTGGC TTGCAATGACATTTATAATCATTGATTAGATCTTCACAAACTGCACCATT TCGACAAGAGTTGTTTCTGCATTCATCGATATTTATCTCACAATACTGTC CTGTCCATCCTGGGTGGCATTGACAATCATATCCGTTGATTCTGTCAATG CATGTTGCATTATTCTGACATTTGTTATCCACACATTCGTCAATGTTTTC CTCGCAAAATCTTCCAGACCATCCTGGTTTGCATGTACAATTGTATGAAG CAATTCCATCGACACAAGTTGCATTGTTCTTGCATTCATTTTTCACGCAG TCATCAATGTTCACATCACAATATTTGCCAGTCCATCCCTTTTGACAGTT GCAGGTGTAGCTATTGATTCCATCAATACATTTCCCATTGACACAGCTGT TGTTGACACATTCGTCGATATTGTGTTCACAGAACTTTCCTGTCCAGCCT GGGAGACAATTACATATGTAGCCATTCACCAAATCTGTGCAAGTAGCATT GTTTTGGCATTGATGAGTCTTGCATTCATCAATGTCGACCTCACAGTATC GGCCAGTCCATCCAGGTTTGCACGAGCAGGTATAATTTGCAATACCGTCA ATGCATTCTGCTACATTTTCACATTTGTTCCCTTCACACTCATCAATATT TGTTTCGCAAAGCATTCCTGTCCATCCTGGTTTGCAACTGCAAGTGTAGT CATTGATGCCATCAATGCACTCTGCTTCATTCTTGCAACTGTGGTTTTTG CATTCATTGATGTTTTCTTTACAATACCCTCCTTTCCATCCTGGCAGACA TTTGCATTTATAATCATTGACCAGATCTACACATGTTGCATTGTTTTGGC ATGTATGATTTAAGCATTCGTTGATATTTGTTTCACAGAATGGTCCAGTC CATCCTGGTTTGCAGTTACACTTATAACCATTAACCAAATCTAAACATTC GGCATCATTTTTGCATTGGTGATTTTCGCACTCATCGATATTTTTACCAC AAAACTCCCCAGTGAACCCTGCTTTACATTTGCATGTATATTCATTGATA CCATCAATACATTCTGCTCCATTCAAGCATTTGTTGTCTTTACACTCATC AATGTTTTTCTCACAGTAGCGACCAGTGAATCCTGGTATACAGGAACAAC GGTAATCTTGTAACAAATCAATACATGTAGCATTATTTTGACACTTATGC TTCTCACAGTCATTTTTGTTTGTTTCACAGAATTCACCTTCCCATCCTGG TTGACAGACACATTTGTAACCATTGACTTCATCCAAACAGGTTGCATTGT TTTGGCATTTATGATCCTTACATTCATTGATGTTTTTCTCACATCGTTTC CCTTCCCATCCTGGTTGACAATGACAGTTGTATGAACCATTTGTATTCTC ACACGTTGCGTTATTCTGGCAAATCTTCAAGAAGCATTCATCTACATCTT CATCACAATTCTTTCCAGTCCACCCACCCTTGCAAATGCATTTATAATCA TTTAAAAAGTCTTTACAAGTTGCTCCATTATGGCATGGTGAAGATGCACA CTCATCGACTTCCTTATCACAATTCTTTCCCTTCCATCCTGGGTCACACT TACATTGGTAAGCATTCACGTAGTCAACGCATTTTCCATTGACACAAGGA TCTGGATCACACTCATTTATGTTAACATCACATTTCTTTCCAGTCCAACC AGGCTGACAAGAGCATTTGAAATCATTAAAAAGATCAATACATGTAGAGT TATGTTTACATGGGTTTGGTTTACATTCGTTAACCTCACTATCACAATCT TTGCCTTCCCATCCTGGTTTGCAAGTGCAATTGTAATCGTTTTGTCCATT CAAACAGGTGGCTCCATTCTTGCAAGGTGTTGATTTGCATTCATCGACAT CTTTGCCACAATCTTTGCCTTCCCATCCTGATTTACAAGTACAATTGTAA TCATTTTGTCCATTCAAACAGGTGGCTCCATTCTTGCAAGGTGTTGATTT GCATTCGTCGACATCTTTGTCACAATCTTTGCCTTCCCATCCTGGTTTGC AAGTACAATTGTAATCGTTTTGTCCATTCAAACAGGTGGCTCCATTCTTG CAAGGTGTTGATTTGCATTCGTCGACATCTTTGTCACAATCTTTGCCTTC CCATCCTGGTTTGCAAGTACAATTGTAATCGTTTTGTCCATTCAAACAGG TGGCTCCATTCTTGCAAGGTGATGATTTGCATTCGTCGACATCTTTGTCG CAATCTTTGCCTTCCCATCCTGGTTTGCATGTACAATTGTAATCGTCTTG TCCATTCAAACAGGTGGCTCCATTCTTGCAAGGTGTTGATTTGCATTCAT CGACATCTTTGTCACAATCTTTACCTTCCCATCCTGGTTTGCAAGTACAA TTGTAATCGTTTTGTCCATTCAAACAGGTGGCTCCATTCTTGCAAGGCGT TGATTTACATTCGTCGACATCTTTGTCACAATCTTTGCCTGCCTTCCCAT CCTGGTTTGCATGTACAATTGTAATCGTTTTGTCCATTCAAACAGGTGGC TCCATTCTTGCAAGGCGTTGATTTGCATTCGTCAACATCTTTGTCACAAT CTTTGCCTTCCCATCCTGGTTTGCAAGTACAATTGTAATCGTTTTGTCCA TTCAAACAGGTGGCTCCATTCTTGCAAGGTGATAATTTGCATTCGTCGAC ATCTTTGTCGCAATCTTTGCCTTTCCATCCTGGTTTGCATGTACAATTGT AATCGTCTTGTCCATTCAAACAGGTGGCTCCATTCTTGCAAGGCGTTGAT TTACATTCGTCGACATCTTTGTCACAATCTTTGCCTTCCCATCCTGGTTT GCATGTACAATTGTAATCGTCTTGTCCATTCAAACAGGTGGCTCCATTCT TGCAAGGCGATAATTTGCATTCGTCGACATCTTTGTCGCAATCTTTGCCT TTCCATCCTGGTTTGCATGTACAATCGTAATCGTCTTGTCCATTCAAACA GGTGGCTCCATTCTTGCAAGGCGATAATTTGCATTCGTCGACATCTTTGT CGCAATCTTTGCCTTTCCATCCTGGTTTGCATGTACAATCGTAATCGTCT TGTCCATTCAAACAGGTGGCTCCATTCTTGCAAGGCGATAATTTGCATTC GTCGACATCTTTGTCGCAATCTTTGCCTTTCCATCCTGGTTTGCATGTAC AATCGTAATCGTCTTGTCCATTCAAACAGGTGGCTCCATTCTTGCAAGGC GATAATTTGCATTCGTCGACATCTTTGTCGCAATCTTTGCCTTTCCATCC TGGTTTGCATGTACAATCGTAATCGTCTTGTCCATTCAAACAGGTGGCTC CATTCTTGCAAGGCGATAATTTGCATTCGTCGACATCTTTGTCGCAATCT TTGCCTTTCCATCCTGGTTTGCATGTACAATCGTAATCGTCTTGTCCATT CAAACAGGTGGCTCCATTCTTGCAAGGCGATAATTTGCATTCGTCGACAT CTTTGTCGCAATCTTTGCCTTTCCATCCTGGTTTGCATGTACAATCGTAA TCGTCTTGTCCATTCAAACAGGTGGCTCCATTCTTGCAAGGCGATAATTT GCATTCGTCGACATCTTTGTCGCAATCTTTGCCTTTCCATCCTGGTTTGC ATGTACAATCGTAATCGTCTTGTCCATTCAAACAGGTGGCTCCATTCTTG CAAGGCGATAATTTGCATTCGTCGACATCTTTGTCGCAATCTTTGCCTTT CCATCCTGGTTTGCATGTACAATCGTAATCGTCTTGTCCATTCAAACAGG TGGCTCCATTCTTGCAAGGCGATAATTTGCATTCGTCGACATCTTTGTCG CAATCTTTGCCTTTCCATCCTGGTTTGCATGTACAATTGTAATCGTTTTG TCCATTCAAACAGGTGGCTCCATTCTTGCAAGGCGTTGATTTGCATTCGT CGACATCTGTGTCACAATCTTTGCCTTCCCATCCTGGTTTGCAAGTACAA TTGTAATCGTTTTGTCCATTCAAACAGGTTGCTCCATTCTTGCAAGGTGT TGATTTGCATTCATCGACATCTTTGTCACAATCTTTGCCTTCCCATCCTG GTTTGCAAGTACAATTGTAATTGTTTTGTCCATTCAAACAGGTGGCTCCA TTTTTGCAAGGTGTTGATTTACATTCTTCGACATCTTTGTCACAATCTTT ACCTTCCCATCCTGGTTTGCAAGTACAATTGTAATTGTTTTGTCCATTCA AACAGGTGGCTCCATTCTTGCAAGGCGTTGATTTGCATTTATCAACAACG TTATCACAATCTTTGCCTTCCCATCCTGGTTTGCAAGTACAATTGTAATC GTTTTGTCCATTCAAACAGGTTGCTCCATTCTTGCAAGGCGTTGATTTGC ATTCATCGACATCTTTGTCACAATCTTTGCCTTCCCATCCTGGTTTGCAA GTACAATTGTAATCGTTTTGTCCATTCAAACAGGTGGCTCCATTCTTGCA AGGCGTTGATTTGCATTCATCGACATCTTTGTCACAATCTTTGCCTTCCC ATCCTGGTTTGCAAGTACAATTGTAATCGTTTTGTCCATTCAAACAGGTC GCTCCATTCTTGCAAGGCGTTGATTTACATTCGTCGACATCTTTGTCACA ATCTTTGCCTTCCCATCCTGATTTGCAAGTACAATTGTAATCGTTTTGTC CATTCAAACAGGTGGCTCCATTCTTGCAAGGCGTTGATTTGCATTCATCG ACATCTTTGTCACAATCTTTGCCTTCCCATCCTGATTTGCAAGTACAATT GTAATCGTTTTGTCCATTCAAACAGGTTGCTCCATTCTTGGAAGGCGTTG ATTTGCATTCATCGACATCTTTGTCACAATCTTTGCCTTCCCATCCTGAT TTGCAAGTACAATTGTAATCGTTTTGTCCATTCAAACAGGTTGCTCCATT CTTGGAAGGCGTTGATTTGCATTCATCGACATCTTTGTCACAATCTTTGC CTTCCCATCCTGATTTGCAAGTACAATTGTAATCGTTTTGTCCATTCAAA CAGGTTGCTCCATTCTTGGAAGGCGTTGATTTGCATTCATCGACATCTTT GTCACAATCTTTGCCTTCCCATCCTGATTTGCAAGTACAATTGTAATCGT TTTGTCCATTCAAACAGGTTGCTCCATTCTTGGAAGGCGTTGATTTGCAT TCATCGACATCTTTGTCACAATCTTTGCCTTCCCATCCTGATTTGCAAGT ACAATTGTAATCGTTTTGTCCATTCAAACAGGTGGCTCCATTCTTGCAAG GCGTTGATTTGCATTTATCAACAACGTTATCACAATTTTGTCCAGCAAAA CCGTCTTGGCATTTACAGACATAAGAGTTGCCAGTGTTAACACAACTTCC ACCATTTTGGCATGGGTTCGGTTGACATTTGTTCTTTGTTTCACAATCTT TTCCAATCCATCCATCTTTGCATTCACATTCATAGCCTGCTTTAGTTGCT TTGCATTGTCCATTGTTTTTACATGGCTTTTCTTCACAGGGACTGATACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024211TCONS_00024211Clytia hemisphaericatranscript
TCONS_00024210TCONS_00024210Clytia hemisphaericatranscript
TCONS_00024209TCONS_00024209Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000478supercontigsc0000478:215609..223708 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CRB2protein crumbs homolog 2 precursor Homo Sapiens
CRB1protein crumbs homolog 1 isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.12 0.04 0.04 0 0.01 0.06 0 0.02 0.07 0.13 0.01 1.59 2.37 0.36 2.35 0.99 1.11 4.98 5.84 3.62 5.19 3.14 5.95 16.26 17.19 0 0 0 0