XLOC_012598 (gene) - C. hemisphaerica

Overview
NameXLOC_012598
Unique NameXLOC_012598
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000421:21920..32370-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012598 ID=XLOC_012598|Name=XLOC_012598|organism=Clytia hemisphaerica|type=gene|length=10451bp|location=Sequence derived from alignment at sc0000421:21920..32370- (Clytia hemisphaerica)
CCAGCTTTGGACTATAGTAGTACCCCCGTTTGACATTTACATGACAAATT TATTCTTACCACATCTTGGATTACTTTTCTCATTACAATAAGTGATAAAC TGCTCAGTCATTGTCCTGGTCTTTGAATAGCGGAAGATCAGAAAGTAGGC TGGGATCCTGCTGAAAAAGCAGGCTGCAGGTAGCCATATTGGAATTTTAT GTATATACCAATATCGAGTTTAGGCTTGCTAGTAAATTCACTAATATTGG TCAATTCAAAAATTTAAATTCGTGCCCATTTCCTTTTTAAGCGGGATGTT GCCGAGCGCTGATTGGCTTTTCTTTGCAAAGCACATGAGAAAAATGAAAT CAAAAGTGAAACCAGAGAACACTAATTTTTAAATTTCTAAAATGGCGGGA GAAGTGAAAGGATTTTTGTATGGATGGGTTGGAAAAAACCTAAAAACAAT ACCTAAATTCGAACCGAACCCTAATGGTCCACACCGATTCAACTTCCAGG TAATTTTTTAAACCTTTCAAGCCGAATTATATCATATTTTCTTTAATGTA CCTTTTGAAAATGAAGTTTTATAAAACAATCAATGTGGATCCTGACGACT TGTAGCAAAAGGTCTGCGGCAAGAATTTATGAGAAATTGGACCCCTTTTC CTTCCTTTTAAAGATGAGGTCTAGCAAACTGGATGAAATTCAGCACAGAA TCTAACTTGCTTATTATTTACATTTTGGAAGTTATCACACTGTACCGTAG AGTCGTCTAATCTCGACATACGTCTTGCAATCTCGACACCGGATCTGTAA AATAATCAAAACAAACCTTGAATGAAATTCTTGGTATCATTCTTATCGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCCAGTATGGCGGTCACATTAAATTCAAAAGGA AACCGGGTTCTTTTTATTATTTTCGGTTCACGGTAAAAATGTCTACTAAA ATATTCCTCGCGTGCAAAATGTTGTGTTGTTGTGATTTGGACATCTTCGT TGAAAGTATATGCTAATTAGTTTTTAGCGATTACTACATCGTTAAAGTTT TCTTTTCAAATATAAAGTAATAACACTTCACATTTCTCATATTATATTAA CAATCTGTGATGTGATAGAGAGAGAGAGTACATTTTAGTGATTGATTGAT AACTTTGGTATGTATTTGTTTATGTTTGATTTTTTATTTCGAAGACCAGC CTCCAGCCTACAGCTATGTCGAGATTGCAAGACGTATGTCGAGATTAGAC GACTCTACTATACCAGACGGTACTAATCGAATGTTCGGAACGTTTGATTC CAGACCCGATCAATCGAACTTGTCGAACCAATCGAATAATCGAACTAATC GAACTCCATCGAACGATTAAAGTTCGATTAAAAAAATTAATCGAAATCTA GGATTTTTTAAAAGATTGTAAGTGTTCGATTAAGTTCGATCAATGGGATC AATTGCAGGATATTTTTAATCAAAACTCTTAATTACATAAGCAAAATAGT CGTTTGGAGATCTAAAATAGCTTGAATTTTGGGAGTCTATTCAGGTCTAT TGTATAAATTTAAGTTGGTGGAGAGGAAAAAATTAATTTGGGAAATTTTG GGTAAATGCTTGATCGATTTATCTTGCTTTAACTTGCTTACAGTAATGCT AGTCATAGCTATGACAATGCACTTTAATTTTAAATTTGAGGGTTGCAGGT TCTATGGGAAAAAAAATTTTGTATGGAGCCCAAAGAGTAAAATAGCAAAT TTCTAGAGCTTATATATAATTGGATATTTTCATGGAAAGTGGATTTTTAA CACATTTGGACTACATGAAATCATTCTTTCATTAGATTTCCATTCAAGGT GTCAATTACATTGGAAATGGTGGTGGTAAAAACAAGAAAGAAGGAGAAGC TGTGGCAGCCCATAACATGCTGAATCATATGGTCCAAGCTGGAATCATAC CAAGAAATGCTGTCCCTCCAAATATGCTTGTAAGATCCTTCTTTTACAAG TTTATTTAGGGATCTTCGACAAAAAAATTTCGAATTTTTCATCGACATTG GGCCAATAAGGGGGTGGGGGGTCCAACTACATACCGATAAAAAAACAAGT ATTGAGACGAAAATCCTTTCAGCCAATTTCTTTCTGTTTTCGTCCACAAA CTCCACTGAAAGCATATGATTGCACTTGCTTTCACCTTTGCGCACAAATT CACAACTTTAAAAGTACAGTTTTGAACTAGCTTTGATTTCATTGGCCAGC GCGCTGCCTTTTCCTTCAAAATGTTGCGACTTCATCCCATCATTTTAACT TTCATTTTGATTAAAAATATCAATGCGGGTATGAACAAACTCAATGTTGG TGCACAAATGGACAAAAATTCAACGGTGACGGGTCGGGTGGGAAGGCGAT GGCGGACAAGATTGGAAGAAATTGTGTTTTTGAAGATGTAAAAGTTGGTT TTGAAAAATAAGAGCAAGGGGGGAGGGGGTCTGAAGCTTATCAGCCCAAT GCCGATAAATAACCCGAAAGCTTTTTGTCGAAGACCCCTTATTTTAGCAT TCTCTTTAAAGGTGGAAGATGTTATTCCAAAGTACTGTAAAAAAGATTAG TTTCCACAGGAAAGGACATTTTTGTAATTTTTCACTGCACTTTTTAAGAT GACATTAAGAATGTGAAAAAAAGTGGCTATTAAAAAATATATTTTTGTTG GTTGAAGAGAATGCGCCAATTTTCTAATGTGAAAAGAACTAATTTTCTAG CTTAACCCTGTGGCTAAAAAAATAATTTCATATTCTAAAGCTAGCTAAGG TGATTTTTTGTGGCTAGAAGTCATTTTCAAGCGATAAATTGTGGCATTGA ACTTTGATCTTGATAAAATTTGATGTAGGGTTCAAATAACTTTTAAGTAA AAAGTCTCCGGAGGTGACTATGTCGCTCAAGAAACAAACTATATATAGAA ATTTTGTGAAAAAAATGTGAATTTTTGTGGCAAACTTAAGGCCTTATTAA AGAAACATGGTATTCTAATCATTATAGTGTGACTACCTTACTTTTCCAAA TTCCCAAAAACATACTTTTAAGAGAAGCCCAGATCTAACTCGATAAGGAA TAAGCATCCCTGAGTGTGAATTGTTGTGGCTAAAGAGAAACTTGCTCTGT GAAAAATGGTGGCTTTTTGCTGAAAATTTACATTTTTTGACAGGATTTTC AACTTTTGAGCTACTTTTACTAATTGGTTGAGTTAATTTAGATGAAGGGA TGTAATGGATTTCTGAAAACAATAATGTTAGCCACAAAATGTCACCTGTA TGACTCCAAGCAAACTGCAAAGATTCAATGAATTTCTTAAACTGTTTATT AAGGAATTGATTAAATTGAAGGACTTTATGGTATAAATTGATTTTAAAGA ACAAATTTTCCAGAGCTAGTTAACCACATTTAATCACAATATTAGAAAAT GGTTTTGGTTATCAAAATAAGAGTTTTTTGCTAGTTTCATTGGACAAAGC CTTGTAGGTATCTACTATCTAAAGATCTAATAGAATTTCTATTCATTTAA TATTCATTCATTAATAAGTAATTTTTAGTTATTTTTTATTAGGGAATATT TTAAAATTCTACATTTATTCTTGATAGCCACTTTCCATCACCTCTCTTTT GTGTGAAACAGGTAATGTTATATATCAATAGATCTCTATTTAGTTATAAA AATACTTCTTCTTAAAATACCCCTCCTTTTTTTAGCCACAAAACATCACA AAAGGACTTTAGGCATAGATCATAGTCAATTCATACAAAAGTATAGACTT CCTAGGTTAGATTTCCCTTGAAATCACATCTTTAAACAGGCTAGTGTTTT TTTGTGGATATAAATTGTAAAGTCTGAGAAATTGCTTTAAATTGACATAA TTAGCCACTAACTTTCACACATATGAAAATATCAGTATTTTACGACATTA GCGTATTCTAAGCTATCATTTGAGCATTTCTATTTTTACTTCAAAAATAA TTTCAGCTTACTTCGAACCACAAAATTTCACTTGTCTCTTTAAAATTTCC ATCACATTTTCATTACAAGATATCAATCAACATTTCAACAAGCTAATCTA CATAACCTTTTTAAACAAAAAGTCAAAGTGAAATTTTGAGAATACGTTGA AAAAACACAAGAAAACCTTGAATATCAACTACAATAATTAACAAAAAAGT TTTTTAAACTATTGAAAAGCATCAACCTACAGGGACAAGCACTTTTCTAG AAGTTGTCAACTTAGGACTTAGCATTTAGTGAATTATAATATGGTTTTTC TAAAAAGACCACTTTTTGTAAAATTCTAAAAAATGTCCTTTCCTGTGGAA ACTAATAAAAAGAAAAGATGATTTTTTAAGTTAAAGAATTTAGGCTTATA TAAAATTACCAAGCGCCAATTTAAAAAAGGCAATCAACTTTTGGACCTAC CTTTAATAAGGGGGGTCCTATAAATTAACCAGTGTAAGTCTGTCCGTCTC TTATTAGGTTTCTGAGGATTGGCTCATTCGATTTTTCTGATTTTTTGCTC AATGATGCAAAATGGTAATTCCCAAAATGTGACGGAGCCCGATTTTCAAA ATTAAAAATTTTGGGTAAATTTTAGCCAAAAAACGGCTAAAAAAGTTTTT TTTGACTTTGCTGGACTTTGTGAAATATTAAATCATTAATCTTTTCTGAT ATTTTGCATGAAAGTAGGGTACCATCATAGGTGAAAGATGGCTCTAGCAG ATTTGCGTAAAAAAAGTTTTTGGCTCAAAAAATGCATCTTTATCTATAAA CATCACTATCTATAAGCATACATCTGTTCTTAGCCAAAGCACTCAATTTT CTGATGAGATGAGAGAGATGTTTTTTTGCTCATGAAGGCTTAATTCTGAA GAATATTTGTGTTGAGGCATGAAATTTTGGTTGCTAGACGTGTTTTTATA GAAAAATGGGTCAAATCTGGTCAAATTCAATATTTTTTTAAAGCTCATTA CCAATTAATTGGTTATAAGATTTTCTCGAGATTTGCTTATTCATTCTTTG TGATTTTTTGCACAAAGGTGCATAACTATAAACCCTTGAATATGAAATTC CAGCTTAAAAAAAAGACTAAAAAAGGGCTTTGGACTTTGTAGAAAACTGG TCCATCTGGGACCATAAATTTTTCCTGATTTTTTGCATGAAAGTAGGGTA CCATCATTGGTAAAAGATAGCTGAAGCAGATTTTCACAAAAAAATTGAAT TTTTATCCCTAAGAATCATATATTGTAGTTGAACACCATTTAAAAGAGTG CTTGATAGAGCAAATTCATAAATTTATTTCAAAATTTCAATGTTAAAAAA AGTACATTACATTACTTCAAGTTTCATGTCATGCTCATGTAGATATCGAT TATGCTTTAAATGCATAGCCAGGTAGGTCCAAAAGTATCATTGCTTGTTA GACATTGAATTGCTTCAGTACTTATTTTTTGACTGTCCAGCCTGTATCAG CAGTTAAATAGATTTGGATTTAACTCTTTACTTTCTTACAGAATTTTTCA GTGCCTGCAGAACCTCAAACCAGTGGATCAACAGTTGGAGCACTAGGAGG ATCAAATGTTGGGAGGTCTCTTCCCAGCTCTGGTCCACTGGCTCCTCACC AGATTTCTCCTGGCCAGAGTGGACAACAAGACCAAAAACCACCTCAAATG ATTCAACAGGCCGCTCCAAGTANTGAAATATTAAATCATTAATCTTTTCT GATATTTTGCATGAAAGTAGGGTACCATCATAGGTGAAAGATGGCTCTAG CAGATTTGCATAAAGAAAGTTTTTGGCTCAAAAAATGCATCTTTATCTAT AAACATCACTATCTATAAGCATACATCTGTTCTTAGCCAAAGCACTCAAT TTTCTGATGAGAGAGATGTTTTTTTGCTCATGAAGGCTTAATTCAGAAGA ATATTTGTGTTGAGGCATGAAATTTTGGTTGCTAGACGTGTTTTTATAGA AAAATGGGTCAAATTCAATATTTTTTTAAAGCTCATTACCAATTAATTGG TTATAAGATTTTCTCGAGATTTGCTTATTCATTCTTTGTGATTTTTTGCA CAAAGGTGCATAACTATAAACCCTTGAATATGAAATTCCAGCTTAAAAAA AAGACTAAAAAAGGGCTTTGGACTTTGTAGAAAACTGGTCCATCTGGGAC CATAAATTTTTCCTGATTTTTTGCATGAAAGTAGGGTACCATCATTGGTA AAAGATAGCTGAAGCAGATTTTCACAAAAAAATTGAATTTTTATCCCTAA GAATCATATATTGTAGTTGAACACCATTTAAAAGAGTGCTTGATAGAGCA AATTCATAAATTTATTTCAAAATTTCAANGAAATTTTCACAAAAAAATTG AATCTTTATCCCTAAGAATCATATATTGTAGTTGAACACCATTTAAAAGA GTGCTTGATAGAGCAAATTCATAAATTTATTTCAAAATTTCAATGTTAAA AAAAGTACATTACATTACTTCAAGTTTCATGTCATGCTCATGTAGATATC GATTATGCTTTAAATGCATAGCCAGGTAGGTCCAAAAGTATCATTGCTTG TTAGACATTGAATTGCTTCAGTACTTATTTTTTGACTGTCCAGCCTGTAT CAGCAGTTAAATAGATTTGGATTTAACTCTTTACTTTCTTACAGAATTTT TCAGTGCCTGCAGAACCTCAAACCAGTGGATCAACAGTTGGAGCACTAGG AGGATCAAATGTTGGGAGGTCTCTTCCCAGCTCTGGTCCACTGGCTCCTC ACCAGATTTCTCCTGGCCAGAGTGGACAACAAGACCAAAAACCACCTCAA ATGATTCAACAGGCCGCTCCAAGTAGGTTTAATTAGAAAAATTCCAATTT CTAGTATCAGAATTTTTACTCAAAGAACTCAGAAAGTGGTTAGTATTCTT CACATCACAGTTAATAATCACTAAGTAGGATCTCCTAGCAATTACAGCAC TACTTACAGACTAACTATTATTCTATGAGCAATGGCCTCAAAAGATTTTT TTTGTAGATTTGAAGTTAAATGTCTGAAGAAATTTGATATTGTAAAAATG ATAAAGTCATAAAGTTATTGTATTAGAGTGCTAGATGCTTAGCTCTAGTT TAGACGGCCCACTTTTTGCCCTGCCTATTCTAATTGTGAATTTAAAGTGG GCATAAAGTGGGCTGTCTAAAATGCATTGCCCTCTTTTGACGTCAATGCA ATGACTTCTTTCAATCTTTTTCAAGCAAAGATTTAAGCTGCCAACTTTAA TTACCCAACTTCTGCCTACTCTAACAATTAGANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNACACCATTTAAAAGAGTGCTTGATAGAGCAAAT TCATAAATTTATTTCAAAATTTCAATGTTAAAAAAAGTACATTACATTAC TAACTTCAAGTTTCATGTCATGCTCATGTAGATATCGATTATGCTTTAAA TGCATAGCCAGGTAGGTCCAAAAGTATCATTGCTTGTTAGACATTGAATT GCTTCAGTACTTATTTTTTGACTGTCCAGCCTGTATCAGCAGTTAAATAG ATTTGGATTTAACTCTTTACTTTCTTACAGAATTTTTCAGTGCCTGCAGA ACCTCAAACCAGTGGATCAACAGTTGGAGCACTAGGAGGATCAAATGTTG GGAGGTCTCTTCCCAGCTCTGGTCCACTGGCTCCTCACCAGATTTCTCCT GGCCAGAGTGGACAACAAGACCAAAAACCACCTCAAATGATTCAACAGGC CGCTCCAAGTAGGTTTAATTAGAAAAATTCCAATTTCTAGTATCAGAATT TTTACTCAAAGAACTCAGAAAGTGGTTAGTATTCTTCACATCACAGTTAA TAATCACTAAGTAGGATCTCCTAGCAATTACAGCACTACTTACAGACTAA CTATTATTCTATGAGCAATGGCCTCAAAAGATTTTTTTTGTAGATTTGAA GTTAAATGTCTGAAGAAATTTGATATTGTAAAAATGATAAAGTCATAAAG TTATTGTATTAGAGTGCTAGATGCTTAGCTCTAGTTTAGACGGCCCACTT TTTGCCCTGCCTATTCTAATTGTGAATTTAAAGTGGGCATAAAGTGGGCT GTCTAAAATGCATTGCCCTCTTTTGACGTCAATGCAATGACTTCTTTCAA TCTTTTTCAAGCAAAGATTTAAGCTGCCAACTTTAATTACCCAACTTCTG CCTACTCTAACAATTAGATGGGCAGAAAGTCAACCGTCTAAACTAGAGCT TAGACATTTGAGATCTTTCAACCCTGGCAAAAATGTCCTTCTTTTTGGTG TTAACAACAATCCGATGTACAAATTATTCTCTTTCTAGTTTCTATGAGCC CTGGTCAAAAACAGAGTGTAGGAGCCAGAAACTATCATTATAATATCCAT GATTTGAAACGCAAGCTGGATGAGGTACATATAAATATTGAGCTATCATA CTTTAAAAATATTTACAAATTTGACATTCCCAACCTTTTGTTTTAAGCTT GTTTCTATGCAAACTTAAATGAGTGCCCGAAGAAAATTGTGTGTACACTA CAGTTATAATGTAGAATTAGAGTTATGTACTTGATAACCAAAATAATAGG AACAATAGGAAAAAAGCCTTAATCTTTTGGTCGGCACAGTCTTGGTTTAT TTAATACTGTATATAATTTCTGTAAGGAAGTTAAATATTTCAACAAGGAT GATTTTATTTAGGCGGAAGAAGTTGACACGAATTCTCATCTTCATGGCAA CTGGAATATAACAAACGCAAAATCAGCACTCCATGGTTTTCTAAACAAGC GAAATATTCCTGCTGATTTTCAGTATTTTCAAGAAGGTCCTGATCATTCA AGGTAAGCTTCAAAGATGCTCTAAAAATAAAGACATCAGATTCTGACTCT GTAAATATGTAAAAATTTTAACTCTTCCTAGAAATGACTTAATTTAATAA AAGATCTATCTATGGACTATAAAAGCAAAGTTATTTTTGAGATTGACTTT GGAATTTTTACCTTATTCACAACAATTTAAATCCAGTTTTTTTATTCCTA TTTCCCTTTACATATTCAATACAATAAGTTCTTTTGCTGTTTTTTTCTTG ATAGATTTTTCCGTGCTAATCTCAGCTTCTTTGTGAATGAAGCAGGAAGA ACATTGAATGGGAAAGGTACAGCTAGCTCAAAGAAACTGGCTGCTCAGAA TTGTGCATTGAGTTTGGTGCGGCAACTTTTTCATCTTGGAGCAATCGAAG CAGCAGAAGTTGGTCAAGTACAGCCAAAGAAAGTTAAAGTAGAAGAGGTT T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022459TCONS_00022459Clytia hemisphaericatranscript
TCONS_00022458TCONS_00022458Clytia hemisphaericatranscript
TCONS_00022457TCONS_00022457Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022459-proteinTCONS_00022459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000421supercontigsc0000421:21920..32370 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.08 7.77 11.58 11.94 13.64 9.63 13.57 15.64 9.62 11.23 8.19 6.98 9.31 8.91 11.2 14.21 16.24 15.81 5.48 5.97 14.11 13.88 9.98 13.03 16.39 16.62 5.52 4.28 8.58 9.55