XLOC_012392 (gene) - C. hemisphaerica

Overview
NameXLOC_012392
Unique NameXLOC_012392
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000405:157192..165759+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012392 ID=XLOC_012392|Name=XLOC_012392|organism=Clytia hemisphaerica|type=gene|length=8568bp|location=Sequence derived from alignment at sc0000405:157192..165759+ (Clytia hemisphaerica)
GCGCATATGTCGCAATTTCCAGACTGGCGGCTAGCAAAAGGTCTTGTGGA
AATGCGTGACTTTCAAGGTCAATGCGAAAGAGTTGCCACCATCTCTCTCT
GTTCTgaaattcattcaaaaaaaaaaatttaaaacaagaaaaatcttaac
TCTAACTGTAAATATAACGCCTAGCTATTTGAAATTTACCTGCTGGGGCA
TGTCCTGCCAAAGTTGGTTCACTCTTTGGGCTGGACATGTTTGTTTAGAT
GATATGGTCTTGCTGAATTCTTCGATTTTGCACTCTCTAGTTCTTCACTT
TTCCCTTGATTTTGCTAGCGTTGGGATTTTCCACACGTTGCCTTTCCTCC
TCGCTTACCTATCAAATAGCTAATTCGTCTAGAGTTCTCCGACGGCTGTA
TCAAAGATAGTTACTCCCAGTATTTCGGCTGAGTAAGCATTTCGAGCGGT
AAGACGTTAAGGATCAGGTTCtatgaaaaaagtaaacaaagccTGTGCTG
AGTGAATGATTCAGTCGGCCCTACCCTGAACATGGCATTCTTCGATAGTA
AACATGTATGAATCGTATGAATCTCACATTTACTTAAGTTGAATCCGAAT
Ggatgaaaaaaattacagaaaatgtcagattcaaaattttttttattcag
attCATGATTGCATACCGCCGcttcattcttcaaaaagaaaTATCCAATG
Tatactttttccaatttttgttttgttttaattataaattgttgtttcat
atttttatcCTTCCTCCCTCTGTCTGTCTGTCTCTTTGcagtttgatttg
aaaattttctgagCTGCTCTCAGGCTGCTGAGAGGATGTTTTTTACATTG
ATTTCGTTATCTTGCTGTTGTAGGTATTTTATTTGCAGTTTTTTATGTTT
GATTAATGTGTGTGCATGGGCTTTATAGCCCTGActcttcatataaaatt
tatgGAAAACACATTTGGCAGCAATTGTGAAAATATGTTGCGTTCGGGGT
CGTCCGACCGactgtttatttacaagaaaacccGATTCAGAAAGTCGGTA
AAATCGTCGGGTTTTTTGGGCGCTGTTCCCAGGTTCAGATCTTTCCCATA
ATGGCGGGCACGGGCGAACGGAGTAtgtctttgaatcattattCTTTGTC
Agtcaggtgtttaagataaaaactgcaattattgctcttttcggaaatta
ttgccgaaaacagcaatttttctAACGATGAAAtgttgaatattacccag
gaatcagccattcgattgagatttgattacgttcgacaatcgaatcgcaa
ttattcgattgcgttcgattacgtttgattggttcgattgcgattttttt
caaagttgttcgattgacaccgtctggacacTCAAAAGCAAAAAGGGTAT
ATACCCttccttgccgaccgacgggggtgctccgctgaggttgaaaaatg
gaccctacatGGGACTTGTATGGAACGCCATAGCTGCCATAAGTGCTCTT
TTTATGTGCTCTTTTTTCATTGAGAtgcgctcttttcattcgctcttttC
TTTCGGTTCGCTCTTTTATTCGCTCTTTTGGTTCGCTCATAGTCATACGC
TCTTTTCGTTTGCTCATTTGCTCTTTTCGTTTGCTCATGTGCTCTTTTTG
TTCGCTTATATGTGCTCTTTTATTCGCTCTTTTGGTGCGCTCTTTTAATT
CGCTCTTTTATTTGCTCTTTATGTTCGCTAAATCATTCAGTTTGCTCTTT
CTTTGCTCTTTTAATTCATTGATGCACTCTtttattcgctcttttcattt
gTTGGTGCGCTCCTTTATTTGCTCCTTTCATTCATTcactcttttcattc
gctcttttATTCGCACATACACTAGAGTTGAGCCCAGTGTGCTTTAGCAC
GTTACAGTTTCAATGCGTCATatgtgtaaaaaccaggtgcGTTGCGCTAG
AGGTCGCACAGCTTTGGTGTGAGTTGTTTgattcaaatcctaccaagagG
AGATCAACAACCTCGTCCttgtgtattccaggctttgtttacgttactga
ttgacgccagagaataccctggtgttagCTGATGCAAGAGGAGAAACTTC
TCAAAACTATATGtacgtcataaaaaatctgacgtcaagttacactgcaa
tgcaatgCTTTCAAATCcaagaacaaatgaaatctgacattttgtttttg
aattgcatAATCTTACATGTTCGAAAAAATTGTTGCCCAAAAATTCTTCT
TGCCTTGGGGCAATGAAACTATTAATATTACTAATATTTCTCGAGCTTTG
TctaaacattaaaaaagcaCGTGATgagcaaaacaaaaacataataGCTA
TTTACAGgatatttttttagaatttcctTTCGGATAATGATAATAAAAGA
GCGCATCAATGAATTAAAAGAGCAAATAAAAGAGCAAACGGAATGCGCGT
TTAGCGAACGTAAAGAGCGAATAAAAAAGCGAATTAAAAGAGCGCACCAA
ACGAGCGAATAAAAGAGCACATANNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTCTACAATTTAATCAAT
TGATCTTTCATCCTCTTATATCTTTTCGATCTTTTAATCTATTATGTACA
CAATAACATAATGACAAACTTCAATAGGCTGAGTAATGTTATATTATATT
GTTTTTGAAGTTGCTACCCATATTATGTATGTTATGGTCTATGGATATGG
CATGGCTATGGCTATGGCTAAATAACAGATATATCTTGTAGGTTATATTG
AAGTTATTTGTCTACTCAGGTAAATTAATGCTTGTCCAAATTTTCGgtaa
tttttcctgtttttttatGCCATTTGtagatgacgtcataaaacaaaaaa
aatgatcTCAAGAACTAGCTAACTAAACTTTgtgaaactttcagcaatga
tatACATTTGTGAGTCATTTTGTGATCTTCTTTctcctttctatcaattt
tggactttttctttGTATCCTTGGTTGTTCTCGCTGGAATTTGGCTTTCA
CATTTTGTTCAAGAAGATTTTGTTACTCATTTCTAGGATTTCTTGTGATC
ATCATGCTTAGTTTGTCATTTCAGTTAATTGGATTCAGATCATTTTTCAG
TTCCTTCCTTTCAATTTCatccaagaaaaaaaaaatgcattGAATTCTGA
AAGAGGTTCTGGTTTGCCATCATCATTTTGAAATCCCCACTAAAATTTAT
GTTTGTGACAGGATCCAGGGCTAAAAGGGCAAGTTTTACACCTTTCAGTG
GtgtttgaaaatcttttgctaTTGAGGAATTTCCCATCATTGCTCTTGTC
CTTCGGTTATCTTTACACTACTACTGTAGGATTGCTAAGTTTTTAGTGCT
TGAGTATAACACGAAGAAGTTCTCTTTCAAACTGGTTTTTTAAAGCTTTA
GAGCTTTGACCTTTCTCTTTACaaagaaaatatattattttgaaattaac
cagccctttttctttaaaagcctattttttcaaactttttaccTTTCGGC
CTATTAGTTCATTGTAACCAAAACTCATCTGGGCACAGACCAATGTCTTT
TGTCCTTTTAGGTGTCATCTAATAAACagggattttgaaaaatattcaaa
tttttagtcaaATAATAACTTACATACTTTTAATAACTTAAATGAACATC
TAAAGACagccaaatatattttgaaaaattaacaaatagAAGGCAATCAT
TTTAATCATCCAAGACTCTTGGACAGCTTGGGGATCGAGAATAGACTTAC
AGTATTAATGCAATTTCTATATTTTGTAATATTCTACTGACATTCAACGT
TTGAGTTTAGGTTGGCCTCATTGGTATGATTTTGAAAGGTACAATAGCAC
TTAATTGTCACTTGATGCTTGATGCTTGAATAAAAAAAGAGAGTTGTTTT
TGGTATTTAATCCCGTTAATCTGGGTTAATCTGTTTCTTACCTTAAAACA
TGGCATATAAGTATACTATCTTGATaaataaatagttttatacattatat
ataattattttataaaaCATTCTTTAACAAATAATTTTTGTCTCCTTAAA
AAGATGTTTCAGCCATATAGAAATTTGAACCTGCTAGTAAAGCGTTGTTT
TACATCATCTGTCACTCGGCTAGCATATAGAGATGTTACCAAAGATCACC
CGGTTATTGTTGGATCAAAACAACTCAGAAAACTGTTACAGGTGAAgagc
ttttttaaaacatatgCTATTAAATATGAAAAGTCAAGCAAATGGTTTTG
AGAatgtattttcaaagacaaattATAGAcgagttgttttttttatttac
tgtTGCTCTGCTTGGAAATGGTGTTGTTGGAAATAATTGTTAGAGTTGAT
AAATATTTGGCTATTGACAGCTAGACATATTTTAAAGCTTGGTGCTCACT
GAAaaataataccttaagggaagaaatttttgcagaaagaaattttttgt
ggAACTTCATTTCGCTGTTCACAGCTCGAAATTCTTCAGATATTCTTAAC
CTTTGAGTTTTTAAAGCCTAAAATGtcctatttttttattttcgccatta
tgaaagtatttttgtccgttttcctaTGAAACTGGGTCTTTTATGGTCAG
CAAAACCTTAAAAGGTTCTTAActagttcttaatattttagccatcaatt
ttatatagtttgttcttaaagaacGTGTATTTAATGTTATAGGAACATGT
TGGTGCAAAGAAGTTTTGGCTTGAAAATATAACAGAACTGTCAAACATAG
ATGCAGAGAGGGCTAAAAAACAAGAAGATCTTGTACCACGCTCAAGCAAA
GATAGTGTACAAGAGGTTATTATTCCATTAGGTATGTGAGATCCTTTCCA
TCAAGGGACGCATCTTGGTCTCTGATATTAAGACAAAACAAAGCAAAGGG
GGTAGCTCAAAAATGTGCTTAAAATCCAGATTGatctgtgaaaaaaaaat
taaaaaatccaaaataacCTCCTTAACATTGGGgtgaatttttcatataa
tAAGCTTTTAATTTCATAACACTACTATTTTAGTgcaagttttgttttgt
tttatattatttttgttattaataGAGTAAATTTAGTCATCCAATTTATT
AAAGTTTTTAACTAGATGATGATTCAATCATATATTGATGATTTAGTATA
ATAATTTATAATTAATAAATTATGTATAATAATTTCACATAAAATCTTCA
CCTTGTTTTTTTAGGTTCAGACTTGGTTCAGCGTGAAAAAtacttaacat
tttacaatacAGTGCGTTTTGGAAAACTCCTTGAAGATTTGGATACATTA
GCTGGGTGGGTtggcttcaaatattttaaaggACCTACTGAAAGAGCTCC
CTTCTCTTTGGTCACAGCATGCGTTGACAAAATTAACCTTCAAGAGAATA
CCATTTCTTCGACTGAGGATATTAAGTTAACAGGCTTTATATCATGGGCT
GGAAGAACATCACTTGAGATTACAAGTTATGTTGATCAGTTTGACCCAGA
AACAGGCACATGGAAACGATTATCAGATGCAGTGTTTGTGATGGTTGCTA
GAAGCTTGAAAGATGGTAGCGCTACTTTTGTAAACAAGTTTGTCCCAACG
AATGataaagagaagaaattttttgaacaaGGAGAACTGAATGTCATTGA
GCGTAAACGAAAATCCGCTGAATCTTTATTCAAACAGGCACCTACTGCTG
AGGAACGAAATCTTATTCATCAAATGTTTTTAGGATCTCTTGATCCAAGC
AAATCAACTTTTTCTAGACGTGTCAAGCCTGATAATACAGTTTGGATGGA
GTACACTAGACTAAAAAATCTACTCATCTGTCATCCACAGGCTCGAAATC
TCTACAATAAAATCTTTGGTGGTTTTCTCATGCGGGAGGCTTTTGAATTA
GCCTGGGCAAACACTTGCACACACATCAAGTCAAGACCCACAGTCATTGC
AATGGATGATGTAATGTTTCGAAAACCTGTAGAAGTTGGTTCTTTACTTT
ATCTATCCAGTGAAATTGTATATTCAAAGGATACCTATCTATTGACACGT
GTTCATGCTGAAGTAGTTGACCCTAAAACTGGAGATATAGACACCACAAA
TGTGTTTTACTTTCATTTCACAAGTAGGAACGAATTTCCACAAGTAGCAC
CTATGTCTTATGGAGAGTATATGTTATACTTAGATGGTTTGAGGCATGCT
AATGCACTTCGTATTCCAGAAGTTACAAACTAGCTTTCGTTATTTTATCG
TAGTTGTGTTGCTTCTGTTTGATTATTGGATATAGAAAATCATGTTCGAA
TTAGAAATTTACAGAAATATCATAATTTTAATAGTTAAAAGATTTAAATT
AAACATACACAAGATTCTTAGAATGTTATGGAATTCAAAATACTAATACA
ACATAGTTGTAATTGTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022095TCONS_00022095Clytia hemisphaericatranscript
TCONS_00022096TCONS_00022096Clytia hemisphaericatranscript
TCONS_00022097TCONS_00022097Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022095-proteinTCONS_00022095-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:157192..165759 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ACOT9PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.9	8.32	3.4	4.21	14.91	11.17	15.87	13.62	13.15	12.35	13.56	9.78	14.95	14.03	15.76	17.6	26.84	30.68	17.09	13.23	21.02	18.37	16.09	18.37	20.49	20.32	16.85	11.61	31.35	31.53