XLOC_011803 (gene) - C. hemisphaerica

Overview
NameXLOC_011803
Unique NameXLOC_011803
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000377:117592..125203+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011803 ID=XLOC_011803|Name=XLOC_011803|organism=Clytia hemisphaerica|type=gene|length=7612bp|location=Sequence derived from alignment at sc0000377:117592..125203+ (Clytia hemisphaerica)
AtagaattgaaaacaaataaCAAAATATGACATAGTGGATTGAGAATAAC
AAAATACTTAATAAAGCAATGCGATGGGCGGCCAAGCTGGTATCAACGTT
TCCAGAAAGCTTCATCTCGAAGAGAAGACTGTTAACGAGTTTGTTGCCAA
GGAGATGTTTGTCACGTGatgtaaacaaaataaaagcCACACTTTATGTT
CATGTAAGAATTGAATTTTGTTGTCACAATGATAAACTTAAGCACAACAA
ATAGTGTGGCTGTCTTTTTTTCTTAAGCTTAGGCCTCATTTGAGCCAAAG
TTGGGCTGATGCTTGAAATTATACTATTCTATAANTTTTCTTTCGAATGG
CTGATATTGATCTTTATTTATTTCTCCTTAtagaattgaaaacaaataaC
AAAATATGACATAGTGGATTGAGAATAACAAAATACTTAATAAAGCAATG
CGATGGGCGGCCAAGCTGGTATCAACGTTTCCAGAAAGCTTCATCTCGAA
GAGAAGACTGTTAACGAGTTTGTTGCCAAGGAGATGTTTGTCACGTGatg
taaacaaaataaaagcCACACTTTATGTTCATGTAAGAATTGAATTTTGT
TGTCACAATGATAAACTTAAGCACAACAAATAGTGTGGCTGTCTTTTTTT
CTTAAGCTTAGGCCTCATTTGAGCCAAAGTTGGGCTGATACTTGAAATTA
TACTATTCTATAACAATAGATATGTTTTCAAGCTCAAATCACAACCTGAc
aatgcttataagcgttatgcttatttTGTTCAGAAGTTTACTACTCTTGG
CCAGGGATTTATATCGAAACTAAATCTATCATGTTTGATTTGCACCTTTA
GACTCTTGTTGTTATATATTCTTTTCCCCCGAGCGAGGTATTGAAGATTC
ATTAGGCGGTACCCTCCATGACATCCTCTGTTTCGCCCCCTATCTGCGGC
AATCTAGAGGAGACGATGGAAGGGGCACCTCCCTTGACGTATCGAACCAA
CGTGGTGACTGACTCTTCGTCTATACAACGTCGtcctttaaattttttct
ttcattattttgttttagtggCCATTTTGCAACAAGTTGTGTCCTTATTG
TGACTTCAACAAATATATCAGGTAAGAACAAATGGGCttctccagaaaaa
aaccgtatacccctgttgaggaggtccgtTTCCGTttcaagggggtaagg
tttgatatgtggcggaattccatagggagatacaaaaatatgtcaaaaat
aactggaattccatggNctcagtacagccctcactaaccggtcattattg
tattagagtTGGCTATaatccgtgtaatacagtaatatgggtgttttatg
ataatacgataactGTTACGGGATATTATTGGTTTGTATATAACAACTAC
AATTTACCGTTgttattttttacttattctacATTTTGNtttttaaatcc
tactaaaattcagaattccagaggggttgaaacctaaaattgcctggaat
tccaggggtttgcagcatttccagccacaaaatgatgcacctcctcaaca
gggggtatacggattttttctggaaaagcccaatactgCCATCCCTATGG
ACtgttgttaaccggttactttttcgaagcgggctacatggctttttgcg
caatgtaattggttcttttcgcatgacgacgggcctacattgtccagagt
tgcccgtcgttaggaaaattcattgtgacgtcaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNACTtgtgactttaatacttcaGTACCAGTAttgattgg
gtttgaaaaggaagattttagtcatttcttgtaaccagagcagttttcga
tgcaattttagtcattgagccaaagaaatttttgcactaaaattattcga
agtaatacggtagtcGAATGTGAAAGTGGGACTCTGATCGAAAGGTTGTT
GGTTAAAGAGCACCACTTAAATAAACTAAACTTTATATTATACTCAATAC
ATTGTATTAAAGATTGATATATTTACTTTAGACGGAACATCAACGAAGAT
GAGATGATAGGAGGCTTGCAAACTGATCTTGAACATTTCATAAAGGACTA
TCATATTGGTGAAGTCAAATCGGTCTATTTTGGCGGAGGTATTTATTTTC
CCACCGCGTTTTGTATCCCATCTGAATTTGACCGAGAGAGGCATAAAAGG
TTATAATGTCTTTGGGGAAAGAAAATTCCATTCAGCTCATGCAACTTGTT
TATTAATATACCATTTCTGTGCTTATTAGGTCAAGGGTTATCGTTTGCCG
TGATAAGATTatctaaaaaacttttcttttggagatagtaaaaaataatt
gaaacttTGACAAGCTGATTGCTAATAAAAGAGAATATCGATTTTGCcat
tattttttacttcaactGCAAAACATGCCATACCTCCAAGGAGGCCcgcc
cagcggaccctcaattcacgcaatcacgcaatttattttcgaaattcacg
cattcacgcaaattttccccgagtttcacgcaataacccgatctttcaga
aaatcggaaaatgtTCGGGACAAATcagggaaacattggaaaatcgggaa
aactgcacaaNAAATCGGAAAATGTTCGGGACAAATcagggaaacattgg
aaaatcgggaaaactgcacaaaatcgggaaaactgcacaaaATCGgtggg
aaaaaagggaaattcacgtattcacgcaatgaaaaaatgaattttcacgt
tcacgcaagttttttcaattcacgcattcacgctttttttttctattttc
acgGATTCACccaaaatgcccattcacgcattcacgcaaaccgctggggg
ggggggcttcaaGGGTCGCAAAACTTCAAAATCATTTTGCCTAACTCTTA
TCCAAAGTCCACATATTCAAGCTAAGGCTTTTagtaaaaacaatagaatt
ccaaCGTAAGAACCGTGCAAGAacccatttttagaaaattatggtatctc
gactttgggaaaatattttgggtTTTTGCCCAGGACATTAGAAGAATTCA
ACGTGCCAAATATATGAAACCATCTGATCATCCCTTTAGGCTATATATAA
TGAGCTATGATTGTGCCCTGTTTTCAATTTTCCTCTCAGGCACACCCAGT
CTTGCTCCACCTTACGTGGTATCTGCCATTCTGGAGACTATTCATAAAAA
TGCATTCATTGCTGACTCAGCGGAAATTACATTGGAAGCGAATCCAACCA
CGACAGAAGAATCAAAATTGAGGTAATGAGAACGAAAGATTCTATTTCCA
GTACAGTAttccaaaattccaaaaaatgtttcgtTTTCCAAAATACAGAA
ATGATTAACCAAGTCGACTGTAATAATTTACAAGCTCAAGCTACACAGGC
CCAAatgtatttcaaaaagattcaaagattctaactttttttcagaaact
tCAAAACGGAAGGTATCAATCGTGTTTCCATAGGTATTCAAGTGAGTAGA
TTTTGTAATTAGCCCTTTAGGGAAAAGTCTAGAACTTCTGTAAAggtttt
aatttaaatttctttctagAAACCAAACCTCGAAGTAGAAATTTTATAGT
CCTGTTTTGTTTAATTGGCAACACCAAATTGAACCATATCTCTGTTTCCA
AAAAGTATAATGTCCTAAAAATAAGGTATTTCAccaaaatatcttaaaaa
attGACATCCAACCTAATTTCCTGCTCTTTCCACTATTGgctcttaattt
ttttgaaatttcttaaacCCAGATCGTGTATAAGGTTCCAACATTTCCCT
GGTTTCAAATTTCCCTTGCTTCCCCTTACTTTTCCCTTACTTTTCCCTTA
CTTGATAGAGCTAAATTTCCATCATAAACATAAGattttattaatatttt
tatttacagGCCTTAAACAACAAGGATCTGAAAATGTTAGGAAGAGAGCA
TACCTCGGAGCAAGCCATCAGGTAACGGTTCATAGCATAAAACCATTAGA
AAAATAAGATTGatgtttgcagaaaaaaagttatttgacGAGAAGCATTG
GAAAGTATTACACTACTTTAATCCGTATCTTCGTTTATCTCATAGCTGTT
ACAAGAAAGCAATGGAATTATTTGGTGGGAGGGTATCCATTGATTTTATG
TTTGGACGTCCAAAACAATCAGTGCAAGATTGGAAGAAGGAACTTAAACA
AGTACATATTGTAGAATTTTTACTGCGATGAAACTAATTTGGGAGATCAg
cagaaattcttaaaaatctaaattttacgaagctatttttgacaaattgg
ctcctttttgacaaaaagttagcgtttatttaaaaaaagattttggcaAG
ACTTTTGGTTTCCGATCGGTCGGGTCGgaaaaaatggttattttgacGAT
TTATGAAAGTTTACATTTGGGCAATTTTGTGATGAAAACGGAAGAGCTTA
AACTTTTGGAATACACTTTTCCCAAAATCCACTTGGTTGATATGATACTT
GAACGTCGTCAGACAGttatatcaaaattgaaaacagtCTTTTGGGAAAA
CATATACTATATGTGCAAATGTCATTTGAAGTAATTACTTCATTTGAAAA
CGAGACTCTTAATGCTGTTGATTTATCTTGAGAAGTGTGTATTTTTAGGG
AACTAATTTCAATTTCCAGGCGgttaaaagttattctaaaatttccgaaa
ctttattttataaaaatctttcCAAAGGGCTATAGAATctttttttcaag
actttttttcgCAAACTTAGTATGAATCGCagaccccaggtagtatagga
gcacaaatccgttagtggatgccagcagccaaCCCGAATTCAAGAATTGC
TTTTGGTTTCAAGGAACAGCCCATTATGGTCAAAATGTGTCCAAATTAGT
TTTCTTCAAGTCTAAAAGCTGGACTGGAAAATATTGGTTTtgccgtcatc
tgaccgaccctacATCAAAACCTATATTCGCTTACATTTTTAAACAGTGG
ATATAaggcttttttttaatttgatgaatttcagaTATGTGATTTGGGAG
GGAACCATGTATCCCTGTACCAGTTGACGATGAAAAAACATACACCTATG
GAACGTGACCATCGAAAGGGTAGAATCGTATGTGGAGTTTGCATTACATA
TGAGTACCTTAATTCCATTAATTTTCGGACCTCTTTTATTTTCGTGCAGA
ATACGTGCGCGAAAATAAAAAGCGCGCGAAATAGGCCTATCTTCGCGCAC
TTGGccgcgcgaaaattaaagggtgCGCGAACTAGTAATCGTTCTGAACG
TGTAGAAATCTCATCTTAGGACTCTTTTAATAAAATGGGACCTCGATTCA
TGGTAAATATGCCTCTGGGATGTAAAATCTAGCTTGAATACACACTGAAA
GCGAGTAAAACTCACTTAAAATCGTCAAAAACACTCCTAGAAATTGCAag
atgcgcgaaaattaaaggatgcgcgaattttctattttatgagctgcgcg
aaaattaaaggcgCGAAAATTAGAGGtgcgaaaataaaaacattgcgaAA
ATTAAGGGAATTAACGTATTTTGATTGGGCGAACAAGGCAACATTTAGAA
GGTTTCTAGCTTCTAGTTTCTAGCTGAGTATCTCATGGCTCGGTCTTCGG
AGGATATCGATACCAACAGTGAAATATCGCTTGAATTGATATATTTACTC
CAAAGTACGAACAAAAATGAGTTGGAAGATCGGTAGATCGTTTTCCTGAA
CACATCTTTTCTTATTTCAGTTCCTTCCTAAAGACGATGCTCTTGCTGAA
ATGTATGATCTCTCAGTTCAGGTAGGTGGATGGAAATGGTTTCACTTTTT
TACGGATAGTTTTTAGAGAAGAAGACACTTTGCAAATTGAATTATAACGG
TCGTGCTATTCAAAATTTGCTATGTAGTTCCAGTTACGTTCTCCTATTCA
ATATTCTCGCTAGCAAAGCcaccatcaacaagaaactctcgtaaatgacg
ctctactattcgatgaaagtcattgggcttttccagaaaaaaatcgtgca
ccccctgttgaggaggtccatttccgttttaaggtttgaaatgcagtgga
attccataagggtagacgaaaatccgtcaaaaataagcggaattccaagg
gggtaatgattgaaaatttgtagaaattcggaattccagaggggtaggAT
CCTAAAATTACCTGGAATtccacaaaaggttggacctcctcaaccggggg
tgcacgttttttttctggaaaagcccattgaagTTCGCATCGAGAACACC
AACTGTAGTTTATTAAATCATCCGATAatcctttcaagaagtttttctcc
aatttttacTTGTTGGAATAATTATTTGTTTGATAATCCAGGCATCGCTA
ATTCAACTCAAAATCTTTCTTCTGTAGATGTTGGATGAAGTTGGATTGGA
ACGTtatgaagtttcaaattttgcaaaattggtATGCATTGCTTTATCAT
TTAATATGGGGAAATAAGATTCTGATTTGGTAGTTATACACACTAACAAA
TTGTTGTGTCATTAGATTGGTTGGGTGGAGGATATTTACTGTCATGAGTG
AGTTAAGAAACGTATTGAAGCTGTTATGGATTGAAATATTCCTTTCGTTA
TTCTAGGGTCATGAAAGTTATCACAATTCGGCTTATTGGAATGACATGGA
TTATATCGGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021033TCONS_00021033Clytia hemisphaericatranscript
TCONS_00021034TCONS_00021034Clytia hemisphaericatranscript
TCONS_00021035TCONS_00021035Clytia hemisphaericatranscript
TCONS_00021036TCONS_00021036Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021036-proteinTCONS_00021036-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:117592..125203 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.24	1.89	1.06	0.98	6.59	4.76	4.99	5.91	5.28	4.17	3.62	4.77	3.75	5.57	4.82	6.39	8.48	9.88	1.25	1.46	2.84	2.73	6.25	6.04	5.6	6.35	3.8	1.8	4.58	3.56