XLOC_011715 (gene) - C. hemisphaerica

Overview
NameXLOC_011715
Unique NameXLOC_011715
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000373:151893..156780+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011715 ID=XLOC_011715|Name=XLOC_011715|organism=Clytia hemisphaerica|type=gene|length=4888bp|location=Sequence derived from alignment at sc0000373:151893..156780+ (Clytia hemisphaerica)
AAGTTCGAAGCCAAAAGTTAAATCACTTTTTACGCTCTTTCTTTCAGTTT GCAGCGCAGCACAACCTCACCCCCATCAACCCTGCCCAGACTCCTTATGT GTATGGAAATCAGTTGGAGATATCTTCGCATATAACGAGCACAAACCATA TTATTTTGTGACTTGCACAAACAGTGGTCCAGTATGCAGAAGATGTGCTG ATGGTTTGGAATTCAACGAGAAAAACAAAGCTTGTGTTCGATCattcaaa aaatcaacaacaacgacaacaacaacaactacgACCACCCCAACTACAAC GACCACCCGAGCCATCGACACACCAGAATGTAAGTATTGTTTCAAATTGA ATANTACCACAACAACTACGACCACCACCccaactacaacaaccaccCGA GCCATCGATGCACCAGAATGTAAGTATTGTTTCAAGTTgaacaaaaatca ttttcttcttcagcaTATTTATTCTTAATAAAGGCTGTCATTGCTAGTTT CTGGCTTTTGTTAAAGTTTAAAGAATACTTAAAACATTTAAGGAGCAATC GTTAACTTAATCTTGGAAATGTCTATTAAAAGctctaatttttcttttct cattttcttttctCACTTTAGGCAACGACTCTTTATGCAAATGGGTTCCA AATGGTTCTTTATTCCGATTGGACAACAACAAACCACAATACTATGTTCA ATGCAGTAATGGAATCGCTTCTTGCCGTCAATGTCCACCTCAcatgtatt tcaacaacaaatttGATGTCTGTGTTCGACGCACTGTACCAAAAGATTGG TAATTTATCACCCAACAAGATGTCGACTGCCCGTTCCTGATTGAATAACA ATCGAAAGAGTTATTCATTAACCcttattgtaaatttttaataatcttTA AGAATAAATATCTAccatcagaaaatcaaaataattgtcTGCTACTAACT CAAATTAATTATAGGAAAATCTTCCAAGGGCTGAAATTTTCTATTAATAT CTTTCGTTTAAAAATACCCCATTCTTGACAAAAGATAGACCCTTCGTGTA TCATTGGATTGGGAACTTGGAACTTCTCCGACACACAAATCAAATCTTAA cgatacagggggggggggtgggaaGGGCTCCAGTTTTACTAGGGTTGAAT GTGTATTTAGTCATTATTAAGTATAAGTGTACGCAAAATGAAATATGACC CCACTACAAGTTGACCCAAAGCAGTTTGACAGTTCCATACTGAGTCCTAa aggttctttgtttttattgctGAGAATCTTGATCAGTTAGAAGAAGTCaa tttaaaccaaaaaaataatttcttcaaaaaaaattttagacaGAGTACAA TGTTTTCAAACCATGCAGGTTTTCCGTTTTTTAATCAAAGGTTTAACTAT AGCTTTAATACTGAAAAGATCCGGTCTGCTTTTCtttgaacttttaaaaa tgattttgcaTAATTTTGGCAGCTcctagttgtttttggaaggtataaaa ttgatgtttttaaatataattGGGCATTCCACATCATTAATGTTTCTCTC CTATCCTCCATCTTGTTAGTGCCTCTAGTCTAATTCACTGAACTCGGCAT AATAAAAAGTTACCAAAAAGCAAAGTCCCAGcaagaagtagactctagtc tatgtCTAGGTTATAAATTAAATATGGCCTAAATATTACCCCGACCCTAG AAGAGGAAGAAAAAACGCCTATTTCTGAAAGCGGTTCTGACTACTTTGAT ACCCCTTGCCTATCCATCTCTTGTCAGTTCCTTCTTGAAAGAATGGCCTT GAAGCATCCAAAAGAAAGGAGACCCTGAATCTATCCGAGGAGCTATCTAT GATCGAATTTTAGATTATCTTCAGAGTCTGTCGTAAAAGTGTGTAAACAT TTTCTTAGCCCCCGCTTATGATGCGCCACacacccactgggaccccagcN GGCCCTGAATCTATCCGAGGAGCTATATATGATCGAATTTTAGATTATCT TCAGAGTCTGTCGTAAAAGTGTGTAAACATTGTCTTAGCCCCCGCTTATG GTGCGTCACACACCCACTGGAACCCCAgcccaatgaagtataacccgaag ggctagaagcgaatctccttggtaggatttgaagccaacaaatcctacca aagttgcgcggccaaGCGCggcccgcctggtttttacacaaatgccggat tgaaactaaagtTTACcgctgaatttcgaaaaacatATCACTCAAAAATA AAGGagtcgctagattcaatccgtcgttaCTTTTTCTTACCTGAGAAAGG TTatagattcgcttctagcccttcgggcttatacttcattgcatCAGCAC AACTGGAAAATTTGttcgaaattattttgtttcCGGTGGGAAAactaccc tacaatttcagccccagtgggaaatcgactttgattttatccccattcga aattcaaagtATAAAatttgtactccaaaaccactGGATTTCTTAAGcat gaaacaatagaatttctatcaccttgggattttgaaagaacattttatcc ccgctgtgggGAGaattttcaccggggctgtgagacaggcttgtttaaaa agttattcaCCTAAAAAAGAAACAACTTCTTTTGAAACAAAGTCGGCTGA AATTTGATAggataaaagaaatattttgtccaATAAGAATTTAGCACTTT GCAAactggtctttaaaatacacGTGAACGTAAGACCACTTGTCCAATCT CGCTGAACTTTTGGTTACAAAGTTGTGTGGTCGATAACTTGTATTGACAA TTAACACAGGTAAAAAGTCTATGACGATTTTAAATTCTCAGATATAAAAT TTATGGCTATAGGGATTAAGAACATATATTTAGCTCAGTCTGTAAATCCA CATTACCACAATCCTCGAGTAAGCTACATTTTGATACTTTTCTTTGTTAA AATGCTGGCTTATACGATCAGCATGCATGCATGCTAATGAAACTAAATTG TTTTTATCATACCATTTCGTTCGAACTGTTCGATAGTTTGATCCTTTCTT CTAAAATATGTACTTCTTACAGAAATTTTCAAAGCAAGCTAAAAACATGA AACTCAGGCTTAAGAGCCACTATATTACTCActtaaatttttcaatcaag TACTGAGAGAAAGTTACAGAGGGAAGTTATACCTTACGTTTCTTAACTTA AGTAATAACCCTGGTGTTGACCAATTTAAATCGTGGTTTTCAATCAAACA GTCTGATTATCTAATTACTTAACTACGCTAAGGGTGTTTTTATTTATCTA AGGTATTCAAAtaattaagaaaatttcaaacccaCTTTTTGAGGTCAGGA AGTAGTTTGTGCCAGGGACCAAAAACTAATTGCTTTTAATTCTACAACAA TTCAAACAGGATGATTCAGCATTTGGAAAATCAGTATAAATAGAGCTGGA AAATATGTGGAAAATCATTCAGTGTTCTCACCaagcaagcaaacaaacaa aaagtttcttgaagaATCTACAAAGTTTCAATCATGAAGATCATCATTCT TGCTGTTCTTGTTGCAGGTAAATTTTAATATCATTTTGAATAAGTTTTGA ATAAGCTTTCATTTTAACATATTGaccactttttgaaaaggtatgAAGCC GGATAATCATACTCTGAAAAATAAGCGTAAAAGGAAAAACAAgaacaagt gaaaaaaattaaatactgaCACATCTAATGCGTCAATTGTTAAATGTGTT AAAGCCaataatttgactttttaatttgttttttcagTTTGCAGTGCAGC AAAACCTCACCCCCATCAACCCTGCCCAGAATCCTTATGCGTATGGAGAT CAGTTGGAGACATCTTTGCATACAACGAGCACAAACCATATTATTTTGTG ACTTGCACAAACAGTGGTCCAGTATGCCGAAGATGTGCTGATGGTTTGGA ATTCAACGAGAAAAACAAAGCTTGTGTTCGCTCATTCAAGAAATCATCCA CAACAACAACTACCACAACAACTACAACCCAGTCCCCACCAGAATGTAAG TATCTCCCAGTGACAGTAACTTACAGTATTAACCTATCAAAATATTAcag ttcaaaaatatttaaatcgtaatttttttcattaatttcatGCATATACA TTAAATCTTACAAATAAAGTCTTAAGTTTGTTTAAGCCTCTCTCCTTGTC TTGGAAAAGAATTTTGTTAAATCTCCCTAGGAAAACTATGAAATTTATTT CATATGGTTTCACTCTAAATAGCATTAAGTTAATTATGCTATTAGAAGAG TCAAAGAGaatgcaaaaaagaaaatattaacctcCTGAATTTGTGACATT ACCATCTAACTACTTCTTTAATAGGCAACGACTCTTTGTGCAAATGGGTT CCAAATGGTTCTTTATTCCGATTGGACAACAACAAACCACAATACTATGT TCAATGCAGCAATGGAATCGCTTCATGCCGTCAATGTCCACCTCAcatgt atttcaacaacaaatttGATGTCTGTGTTCGACGCACTGTACCAAAAGAT TGGTAAACATCCAACCCTAACCAATTGGCCGATATAAGGAGCGGGTCATT GAAACTTCTTCTTTTATCAACTTTTGTAAATTcattttgatagttttttt tATGTAGAATAAACATTATTGAGCATTAATACTCCTGCGTATTTTTTGTG TTCCTTAAAAAGAAATTACAGCtgtgatgctctctaattcgacgctCTAC TAATCGTTACGCTCCatttttcgataatattgaaaaccATTGAACCAACC ATGTGTTTCcctaaacgacgctctactaaaCGATATTCTCCCTTATTCGA GATGTAAttctccttgaaaatcgaattagagagcttcA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020889TCONS_00020889Clytia hemisphaericatranscript
TCONS_00020890TCONS_00020890Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020890-proteinTCONS_00020890-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000373supercontigsc0000373:151893..156780 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.66 0.79 0.58 2.67 1.38 0.49 1.23 0.41 0.92 0.96 0.39 14.51 12.3 8.69 5.73 0.9 0.43 0.33 0.14 0.25 0.36 0.44 0.41 0.54 0.73 0.38 0.18 0.3 0.37