XLOC_010897 (gene) - C. hemisphaerica

Overview
NameXLOC_010897
Unique NameXLOC_010897
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000326:324585..334158+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010897 ID=XLOC_010897|Name=XLOC_010897|organism=Clytia hemisphaerica|type=gene|length=9574bp|location=Sequence derived from alignment at sc0000326:324585..334158+ (Clytia hemisphaerica)
TTCTCATAGCAATTCATCGCCGGCTACAGATTTGactttttgggacaatt
tgggTCAAAGTTGTCATTTTGGTTTATGCTGACATTTGCTTGGAGATGAT
ATAAAAATGCAATCATTAGCTGTTTTGTTATAGTGAGGTATTTTTGTAAC
GTTTGAAGTTTTtgcatttctttatttttaaaaaagctttgtcatttaaa
acattttttgtttgattggAGTGTTTTCAGTTGTTTGCCTGTTATTATAT
GAAATTGGGAGAGGGGTCTCTTAGATTCGCGACTACTAGAGAAACCGGGA
CATTTtggtagaaaacattacgtcatgaatatcattaatttttcaattcg
atTTCAGGCAAGACACAAGATGTCAGAACAAGCATTGCGAACCATACAAG
AAGCATACTCTAATGGCACTTTGAGGCCGAACGTCCTAGATCAAAGGGGC
CTGTCCCTTCTCCATTATGCAGCCTTTGATGGCCAATTATTGTGCGTCAA
ATGTTTGATTAATTATGGAGCTGATATACATGCCAGGTTAGTTGTCCATC
AGGTGCAtatacacgtttgttttttttattagaacacccaaaatttggct
gagcctggatgtgcttattttttagcaattttcagcctaaaatgttctta
aatgcgttcttaatttttcagactactctaaattgataatatcaagaaaa
ataaagagcacttaaaattggtacaatttggacaatatttgagtttcgat
tttagaaaatccatgcctaagttgggttaaaactgcttgaaaagaggaaa
aaattgtagtttcttgtcatttttttccaaaccgaggctgggcatgttct
tacaatgttcttaattttttgacgaatttcagcctcaatgttcttataaa
gtgtattcttataaaaaaaagcgtgtacatacactacacagtacagtgtg
tcccaaaaagtGGACACATTTCTTTAAAAAGTAAAATCCTTATGATTTAT
TgcgaaattttatgacttgtataCTTAATGATTTCGGTCCCGAAAACAGA
CCAATAGCCAAAGGTCACTGATATTATCaggaaatgtttattttatCACC
AAATCCAGGTCTCAGTATGCTTAGATAtttatataaaaagcaaaacatGT
ACGGCCTGCAAGCTGCAAAACCATCTTGCAGAAACCTTGTATTTGGCTCT
TCTAGTTCTAGAAAGAAATGAGAATAATTCTGACCCCAGACAACCAGTTC
GACCCTACCCCCTGGAACAATGGATTTTCTCTTTGAAGGTTTAAATTTCT
GAAAGAGCCCATCGTTGTAAGACAACATTTCTTAAAATGACAAATACTAA
AAAACAGAACTACTACTACTAGCTttttcagaaataaaattgaaagctCC
TTACTCACCCACACTAGGTGTCGGTACCGGTATATCAGGTGTCGAAAAAT
GAGAAAGGATATATTTACTTTTGTATCTCTTACATGCATACAATTTCTTA
CCTGATTTCAGATCTCGAGAAGGATTTGTTGCAGCACACTACGCGGCCGC
TGGCGGTCATCTACCGATACTTCAATTTCTTTACGAGCGTGACAAAACTT
CTGTTACTGTCAGGGTAAGAAGGTTTTCCTTTTTATTGTGAAACTAAAAC
CGAATGGGTTCACGCTGCATTgagatttccaaaagaaattgaatataatt
tacctctcccccggacattgtgacttttgaccccggACAGCAGGTTTAAC
ATCCCGACAAAGCATGAGTTGACcgcctggacattcaaaattaccctcaa
acagagaaAATTACCTCCAAACAGATAAAGTCTACCcctggacaaggcaa
attttttaaatttttccccccccccccggaaaatttttcacccccccccc
cccctggacaaggcaaattttttaaatttttccccccccccccggaaaat
ttttcacccccccccccccctggacaaggcaaattttgtagatttttcgc
taccccccggacactatatcctcccccccccccccccgatgtataaacat
tttctgaaaaaactcATTATATACTTGATAACTAAAGCAGGGTAATTTTG
ATCTCAGTAAAAGCACAAAAGCATTACCtgatacctctctgcttgatgct
cagcaattaagaaaatgatcgagggtaagtggagaaatccagggaggaGT
AGTGGCGCCCtgccctaccttcgggtagatagctatcgaaaagGGAGCCT
GCGGGTCGCAGCTAGATATTTTAAAAAACTTGTTTGCgctgattttttaa
atataataatGGCTGTCTTTGACCTGTTGTCTTTTATAGAACGAGTTCGA
CTTGACGCCGCTGTATGTCGCCGGTAAGAATATGATCTTTTTATATGTAT
GTTTAAGAAACATTTCTCTATACCGTCGAAACACCTCTAATGTTATCTGG
AGTAGGCAGGAATTATTtgaggatttttcaaaatattctgttTTAAAtcg
gtcaaaatttttcttgcttATATCGATGAACTTTTTATACCCTGGACACC
AGGAAAACAaaatctgttttgttttgttaccCTAATGGCGTCACTACTCA
ATATGGGTGAAAACGTTTATAAAAGATCAATATATAGATTAATCCAACCA
TAGGTCCATTGTGGATATAGCTTagtttagattttatttattggCTCACA
TTAAGTTTGCTTATGGTCAAAGTTGTCCGAACTGAGTCTAAACGTAAGTC
AAACGTCCAATTATGCTCTAATACGATACATGATGTAAAACTCTTCTACC
CACAGCACAAGAAGGCCAACTGGATTGCCTTATTTGGCTTAACAAATACA
CCCGCACTGTCCGTTACTCAACCagtgttgaaaaaatgaatgccGCCCTT
GTTGCCGCCCAAGAAGGGCGTTTAGATTGCTTGAGATATTTAGTAAGAGT
GGAAAGAGAATTGGTCAAAGCAAAAGATCGGAATGGGTTTAATGTCATAC
ACTATGGTAagccagctggcacacaacgttgtttcaacgtttatttattt
aacgttcacaacgtccatataacgttagatgaacgttgaaacaacgttgt
gtgccagcttggaaGCTTCTTTTAGCTTTTAAAATTGATCACATGTTTTA
AATTTGCAGCCTGTCAAGCTGAGTGcctttattttgctctaaatggCCTG
GTTCTAGTCTAAAATGATTACCTTATTTTAGGGGGGGTGTTTAGAGGACC
GATTTCCGACCCCCGACAATTAGATCcgccgtttattaaaatttaaagat
ttttccagcTCTCCTCCCCTTTATTTGGCACCTGAGAGCACCATCTCTCT
GCAATCCATGGACaaaaattatgagaaaaaaagaaaatttcttgcTATTT
CCCCTTCCCCCCATTTGCAATGCCCAATGAACGATGACACGTGCACACTA
AACATTGCAGTTGGGGAAGGGGATCTTCTTTCTAAATTTCTGAAGTAAct
tccagtgtttttctcaaacattctTGTCCGTGATTGTACTCTCACATTTA
TAATATTTTGCTCTtattctttcactttttttcagctGCGAGTGAGGGGC
ATTCACGTGTTTTAAAATGGTTGATTGATCACTGTAACATCCCAGGAGGA
GCGCAATCGAAAATGGGACAAACTGCTCTCCATCTAGCTGCTATTGGTGG
GCACGCAAGCTCCATAGAAATACTTATTAAATGGTAAGATTAATTGAGTT
TTGAGTGCTACTGCTAGAGGGAAGACACAAATTTAATAAATAGATCTTCG
ATAACATTGAAATTCCCAATCACATACATATTAACTTTCGtgtaattttg
aattattttccctCGTTcacattttgaacattttgaaatttcaaattatc
aaaatttttaaaatttttgaaagtgacATCGGGAAATAAATCTAGAATTT
CCATCAAAGTGAAGGTAGAAAGACCGTCACCATTCTTCCCTAAAAGTCTG
TAAtcgaaaaattcacaaaaactCTAATGGTATGGTTCTGAGTGataatt
ttccattgaattACAAATGGGAATGAAAACGAAGtcaattttgggaattt
tccTACCGGGGATGGGAAATTTTTAGCcatattttccagtggggcggggg
tcctaccgggtctgtgaaatAGGGTTGTAGATGTAGTACCGTATCGGTAA
ACATGAGACTACTAGTATATGTTTATTACTACAGGTggactctctttaat
tcgaacttctattattcgaattttaCTAAAATTAGAACTAATTCTCCGTT
CCCTTCATCAAAGGGAAACCCACTAAAAATAATtactataattcgaatct
ttctgtaattcgaacaatttAAGACTTGCCGATCGACTTGGTAGCCAGAG
TTAACAGTGTAGTACATCTTTCTCTTTTATCAGTGGTGTGTCACTTGAAA
TTGAGGATGACCATGGCAAAACAGCATTGGACTATTCAACAAACTCTAAT
CAAGAATGCAAGGAACTGTTGCAAAAGGTTTGTAAAAAGATACATGTACC
TTTCAAAGAACAACGTTATTGTTTCAATGCCATATATTCTATACTGTATG
GACGTCTTTTCtaagaatgaatttttttaaataaattctgAGTCAATTGG
TGAACAAATTGAAGGTATTTTAAGCAAAACTGAACCTTCTTTCAAAAGCT
ATCGGATGTTCCTATCATCTTgagttttaatttcaaaatattcctatttt
taccattttttgtaagaatttcTGCGCAATTTCTTAACAAAatagggtgt
ttcaaagtttatTATAAAGCCCTAATGTGAAACTAGTTCTTAATATTTTG
GCCATTAAAGCCTCTTGTTCATGTAAGGTTTGTTCTTATAAAAAACGTGT
AGCCAGAAATTTTTTAACTTTTCCGTTTTTCCATAAACTATCACATCATT
TCGATGGAAAGGTAACGGTTCCATTTCACGAGAGCGTTATTTAAGCCATC
ACGAGAACACCCCCTCGAGCGCTTTTCAAAAATTGAAAGATTTGACCTGT
TTGCTTCTAAGGCCCCAGTTTTGCTTTAAATGCCAACACCAATCAACAAa
gagtttaaaaaaagaaagcaGAAGTGTCTATATACTACCGGTATACGACT
TGACCTCTCCTATGAGTATACTAGCAAAGCAGCGAATGTGTTAAGACGGA
ATTGTATAAATTCTTCGTACTATTTCTTGACTTTAGAAATTATCACTCCT
TTGTGATGGCGATGCTGAAAAGAAAGTTCGTTTTGATGAAANTTTAGAAA
TTATCACTCCTTTGTGATGGCGATGCTGAAAAGAAAGTTCGTTTTGATGA
AAGCGTTCAACTCCACGAAACGTTCCCTTCACACCATCACGCAACttctt
ttgataataaaaacacACGTCGTAAAAGGTTTGAGTTTTCCAACGATATT
TATGAGATAGGTCACCCAGTAGACAAGTCTGTTTTCAGCACCTCTATTAT
TCGTTCCGCTTGAAAGTCgttcagaaaaaaattctccGCAATTCGTAAAA
GGTTTGATTTTTCTACTGATATTTAtgaaatgaaactttttttcgcCGGA
GAATACAGAGAAGGATTCGTAGGTAAAAAGGGCTTTAAAATCTATTATTC
AAttatttctgtaattcgaacattGATCCCTTCAACTCGAAAATGGTATA
AAATATTCtccgtaattcgaatctttctctaatttgaataaaattatttG
TCCCAAAAcaatcctatcgtctacacaagctCACTAAAAACGTGAATAAT
TTAGGAGCTGGGTgggtaaattttcattttacccttggatattttgtaaa
tttgtcgAATTCCTCTGAAATTTGGCATATTTGTTCCTTGAGTAAAAATC
Tggatttgtttttcatttttcaattttttttattttcaaggcaataatat
tttcattagTTTTTACACTCGGACCTTTCAATTATTTGAAGCCACAAAAG
TTCGACTATCTACACCCATAGGTGCTTTAAAAGATTTACTGACGCTATTT
TGTTCGTCTATCGGCCATTACGGCTGTAAACACTGCGCGTATATATATAT
TCACGCCTTTTTCATCCCTCTGACGGGCGATAATGTACTACAGCTCTTCT
GGCTATCTCATTAACTCTCCCGCTTAGCGCCCTTTTAACGCCCAATAGCG
CCTTCCACGTTCCAGGTCCTAGGTTTATAATCATCCTTTCATTTGTAGTT
AGAATACACGGCCCTATGGgcacaaacgtcttttggacgtctaatgtacg
tttctaggacgtccaaaGGTCTCAAAGCCGTCCATTGAATGTCCATAAGA
CGTCGCGTGCCCAAAAGGGGGCTGCAAAATTATACCAATGCAGTCAAAAC
GTGTGATTttttacttgctttacaacttacagctgataactttattagtg
tcaataaatttgaaccaatcagaaataaatgtcatgtaaaaAGCACataa
aatttcgagtaaaagcgtgatttgtcttaaTTTTGCAACCTCTTGCAGAG
CGTTGTTATTGCTAAATATTCTTAGGTGGGTGCTATAAACATATAGCTGG
TGGAGCTTCAGTACAGTAAAATCGTCTAATTTAACCCTTGAAAATCAAAT
CAGATAGAGAAAcaaatttttcttgtttcttttcGTTTAGGAGTACTGGT
ATTTTTTGGGATGCAGATTTGCAAGCGGAATTTGATTCGTGGAGAAATTC
ACCAAAACTTTCCAACAATCGGAAACAAATGGTGGAACGAAGAGAACCTT
ACTTATTGAACAGAGGTGATAAAAAAGAATAGAATGCTTTTTCCTTGCGC
CGTGGCTAATTGGGCCATCCTATTTTATATCCATGGGGTAGACAAATATT
TCCAGGAGGTAATCGGAAAAGAATTTCTAAAggagtattttttatttttc
cagggtgtaaaaagttattctaaaatttccagcgTGTAAATGACTGAATT
TAGTTCATCAACTCTCACTTTTAAGGTATAAAAAGAATTATTCCAAGGgt
tctttcgcaaattttgccattttccaggggtatccacacatttttaagaa
tcttttttttccttgaaaaggttcgtccatccctttttaaaatttgagtt
tGGTTTATTTTCACAACGAAAATATACTATGGGTATTCGCTTTCTATGGT
ACCAAACAAATAAACCTGTTGTTCTATTTCTAAAATCTCAACCTGGTCTC
CCCTAGTACccaggtttgcgaggtgacgggtatgtccgagccgaaaatcg
aaaatcgaccctttgagagacaacattttggtgattttgggaccctttga
gagactttctcctaaattttggtccattttttccaaattttggtttgatt
ttcaccaaattttggtcaaaattcttgaaaatcgtgaccctttgagagag
aaatttttgatttttgtgattttgggaccctttcagagactaacttttga
atttgtacccctttgagagacttttgaggaaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaatttgtacccctttgagagact
tttgaggaatgagaaaaggtacccttatggctcgcacatacccggcaccc
attttgcctaagtatccccccccCGGGCCTGGTCTTTATAAAAGCTATTT
GTATAAGGGTCTATTTTATCTGGGTTTTAAGTTTTTCTGTTGGATTGCTG
ATGCATATATTTCGAGACGCCACCAAAGGAACTCTAAATTCCGAAACAGA
AATTTTAAGCTTCTCTTTGCAATCCAATTTGTTCTACAGTATGGAGggat
ctaaagtctattcacgataagtgtgcactcttttttcatttacctataac
ttttgaaggaattcttcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGGTATTCgaaat
ctttactttatttcACAGGTCAATCAAAAGTAATCCGTAACTTGCTAAAA
CAGAATCGAACACCGACCAGCACCAACAGTTCTTTATCAAGGGCGTCTAC
CGCCCCAACAACGCCCATCACGCCTTTAGAAAAACCCGACTTGTTGAAAC
ACATAAATGATCAATTTGCCGAAGCTGCTCGaaaagaaaaacgtaaaaaa
gagAACGCACAACCACCTCCAGTCCCCGCCCGTAATAATGGGCGGNgtct
attcacgataagtgtgcactcttttttcatttacctataacttttgaagg
aattcttcaatctttatgaaTTTGGTagcattggaaagatattagcactt
ttctacaagatcttcatttttttcttcttcattttcatcttcatttttag
aatttttttaaagattttcttatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019392TCONS_00019392Clytia hemisphaericatranscript
TCONS_00019393TCONS_00019393Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019392-proteinTCONS_00019392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:324585..334158 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.79	1.1	0.57	0.43	0.45	0.57	1.29	0.89	1.2	1.15	1.78	1.12	18.81	26.21	18.78	11.94	2.12	3.66	14.3	14.06	4.53	4.62	2.87	2.68	3.93	4.5	4.03	1.37	1.13	0.95