XLOC_009594 (gene) - C. hemisphaerica

Overview
NameXLOC_009594
Unique NameXLOC_009594
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000260:4518..11480+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009594 ID=XLOC_009594|Name=XLOC_009594|organism=Clytia hemisphaerica|type=gene|length=6963bp|location=Sequence derived from alignment at sc0000260:4518..11480+ (Clytia hemisphaerica)
ttatagaTGAATCACTAATTGATATATAGATATAAACTGATAATTGTATA ACAGAAATGGAAATTCAACACAAGCTTATGTTGCTGGGAGTATTTCTATT ATGGAGGAGAGAATGTCAAAGTACTCAACTTTTCAACAATATTGAACCCN ATTATGGAGGAGAGAATGTCAAAGTACTCAACTTTTCAACAATATTGAAC CCTCAGCGTGTGGTTTAAACCaatattttcaattctccaGTTTAACATGT GTTGCATGTGGTGAGTTTCAACAGAGAAGTCCAGATTTGGTGTCTTGTAC ATGTCAACCAGGTGCTAAATTAGTATCTTATTTTGGTGGGCCAGTGAAAA CATGTCAACCTTGTGCACCCCCTAAGGTAATTTTATGGTTCATTTGAAAC TTGCTTTTAGTTTTTCAAACGCTTTTGAAACAATGGAATTTGCTTAAGTG TGGTGCTTATTCAAAAATGTCAATCTTTATTAACTGAAGAATATCATTTA AGTAAGAATGTCCTAGAAAAAATCACTCCCTCTACAGTCACTCTCTTATT TGAACcttttttattcgaatctttctatagttCTAACTAAACACCAGTCC TCTCAGCTGAAAAGTCGTATAAAATACTCCCTGTAGTCCGAATCTTTCAA TAATTCGAAGATTTCCCGTCCCTacaagatcgaattagagagagtcaatt gTAATATAAGATAAATAACTTTGGTTTCTAAAAAATAGtatatgaaatta tttttaacaaCTTTCTCTTTATATTGTCTCTTTTTTTCTAGGACACTCCA CTGATTCTTGTTTTAGATatgatttttaactttttttgctttCGAATGTA GCAGTTTTTCATacttttctgactgatttttgtATAGAAAGCATCTAAAC TCTGTTCTTCTTTCCTTTAACACTCGCCCTTTACATCTCCATATCAGCTT CAATAGTGAGGtcaagtaaatcggtaaaatcacgacgaaggacgaaaatt taacaggctagtgagtttcaaccaatcaagtttcgtattttcactagcct gttacatttctcgtccgtcgtcgtgattatccagTATTAAATCTTCTTTA TCGACAGGTAGTAACAAATGACGGTTGGGGATGTTCTGATTGTCCAACAG GGAGACCATACGACTCTACATTAAAGAAATGTGCATCCTGCGTATCACCT TTACAACACCAAACCGATCGCTCAGAAACAGGTTTTTTGTTGACAAGAAA AACTTGCTTACAATGTCAATCTGATACATCGCCTTCTACAAATGAGGGTG TTTGTAGGAGATGTCATTCACAAGTATTGAAAGTGACTGGTGGTGCCTCT TGTGCATGTCCCACTGATGATGGTATGTTCGattctttttccaaaataat gGTGTCACGATGTGTGTCATCGCAACACATTCTCGTACTTATTTCTACCA TATattgtgtagatatgtagaatCCGTATATCTACCCATATTGTGTAGAT ACGGTAAATGCTTAACATAAGGACTTATTGTAGTTTTACATATGTACACt tatatggtagatttacggattctacCTATCTACATATAATATGGTAGATT TATGGATGTTTACATATCCacacatatggtagaaataagtgcgAGATTGG CCTGGTCATCGCACAAAAGCCTAAAAGTAAAAGATGCTGGCCAGTtctgg catccactaacagattcttgctccttattcttgatatgcgtaagtcattt ttctagcggaaacaccctaaaaaagccgggatttgacctctctctgttac taaaaatagaaacacggaggtCAAAACCGGCCTtttcgggtgcttccgtt aaaaaatatgacgtcatcttgacttacgcatatcaagaattttatATGCG GTTGTTCGGtggtctgtgattcagactagtCTAAAAAGTGGAATATTGAC TTTTCATTAAACTTTCCAATTCTATACGAGCTTCTTTCACTCTTCAAGTT TTGTTTTAAATCTTTTAAGTATGTTTAAGGTTCATTCATCCTGTGagttg caatttttttcatgttttttgtaTTTGCATCTTAGCCCATTGTTACATTC ATGTATAatatactaggtcacagtgtggatgtaaaccacactgaaacgac cgccttccatcacgcatctcacgctcgcgaaagagcgcgcgcacattatc aACGCCTACAtatcatctccagtacattttagattattcattgaaaatag attacAATATAGCCATTTTTAATGTCTCGATTATTcgattccgaataaaa gacattcagagaaaaaaaaagagaaacacctgggtaatctagttaaaaaa accgaaagtaaatggtagacaaagtaacgagccaaggcaaaacgagatta gcgtaccactatgaaagaaaccgcctccggcggtcgaaaaTTTTGTACAG TTGTACAAATCTTTTAAGGTGAATATGAATTTCATTTCAGTATTTACTGG TGGAGTTTGTTTATCAAGGACAAGTGGGATACCAGCAGACGATACTACAT CATACATCATACGACACAAAAACAATTTCATGTCTGCTTATTTCAAAGAA TACTTTCGTGCTGCCAAAGTACTGTGTCAGGAAAATCAAAACTTCACTGC ATGTCAACAGCTTGGTAACCTGTGTGTAATGCTCATGTACAACGAAGATA ATTCAAACCGCGCGGCCACTGATGCGTGCAAAGAATATCTGATTCTAGTC AGAGCATCAACAGACTACGTGGATGGAATTACAGATTGGCCTCGAAATAT GCCTTGGTTGTACTACAAAGACGACGGCAGTACTGTTGTTTTGGAGAAAG AAAACGTCCCACAAGCTTTCACGCGTGGTGAGATTCTCAAATTCAATCTT GTTTCTTATCGTGTAAACGGGTCCTTCTTAGACATCCGTAAAGACCCATC CATATTACAATTATGTCCTCAACCAATGTCAATGACCGAGAAAGCATTTA CGATGACAAACCAATACTCTATCAAATGTCAAATGTCAATTGCTAAACTG TTGCAACAAGACACTGTCTTCTTTGATATGTTTTTACGTGTCGATAATGA TAAATCGCAATATCCCGTCCCTGTACTTGTTGACAACGTACAAACTCGTG GTACGTTCGTTAATCGGGACACGGAACGTAAAAACTGGAAATTAAACCGC CGTTTCTTTTTAATCGATAAATATTCCGGGCTTGGAATAATTGACGATTC TGTCCCTTCCTTTATCCAATACGCATCAAGTATcgagttaaattttcaat tgatcGATAATGGGAAATTTTATCCACCATTATTGAAAATCCACTATGAT GTCCATGATGTTGATCCGGTTACCATGGAAACCGATTTGGtgaacattga gtttaaagtgACGTATACGATGGATACAAGCCAACTGGATGAAAATATAA AGGTATTATACCTTAtcgagttttatttagtcggggttttttttcgttgg agaaaaatttcgtcacctagaggtattttcgtcactttcacccgaccaaa atttcGGGTAAAAGTtctggtcggggataaaaaaatcgggtaaaagtttt ggtcgggtgataaaatatcggggaaaaaattcatcgaggaaaatttcgtc accccctcaaaattttcgtcactttcccccgacatttttttccccgataa ggtttTATACTCCTcatttatcattattattatgaaaagtgttaaaatgt tctttaataAATTCGGCTTGAGTTTAGTCTAGCAATTTcatcctgttttt ttttgtctgttGCTGTATCAGTCATGTCTATTGGTTCGAGTCTGCGTAGA CCTTTAAGCACTACAAATTATTCACGTTTTGTGAAAGGTATTTTTCGTTG AAGCTAATTTCCTAACTCCAATATAATATTTTACAACTTAGCGATAAATA ACTGGTTGTAAATAAAAGTACATATGACTAATGAAGAAGCTAATAATTTA CTTTCGTTCTCTTTTTAGATCACAGTGGGCGTGTTATCAGCATTAGGGGT GGTTTACGCCCTCGTTAAAATCAGTAGCTGGCGTCGACGAGAAGGAATAG CAGTGTTAGACTGTACATCATGTATGTTGTTCATCGTTTACGTTTCCAGT GCCTTAGCTCTTATTTTCTTGGCTGTTATCTTCGTTACCTGTATTCAGTG GCAATTCTTTTTTAAACGCCAGTCGACCGTTATTCGTGTTCTACCGACCG CCGATCAAGAGCATTTGATTGCTAGTCTATTAGTTGCTGCATTCGTTATG AAGTTCTTCGATGTTGTTTATATCTTATACAGTCAAATTTACGTTGatat ctttttcattgattGGGAACGTCCACGTGGTTCACAAGTGACTGGTACGG ACGGGCATACAGTGACTACTCCCGTTAGCGTCATGCGGACTTTATTCGTA GCCAATGAATGGCGTGAGATACAAACGATAAGACGTATCAAACCAACTTT TCAAGTCATTTTGGTAGTTTTATTCCTACAAGGATTTGGTTTCCAATACT GGGCAACTACAGATCCAGTTAATCGCTTATCTGTTGATCGGAACATTGAT TACGTCGGCgaaacaaatctttgtttacgtATTGCCGTTGTTAGCTTACT TTATTTCGTGATTGCAATCATACAGTGGATTATTTATGGTTTCTTGTATG AGCGATTTGTAGGAGATGCTATTGgtgatttcattgatttttgttCGATG AGTAATATTAGTGTTTTTGTTATGTCTCAGAGACAGTACGGTCATTACAT ACACGGACGTTCCGTACACGGCCGCTCCGATACTAGTCTTTACGAACTTT ACGAGCAGTTTCAACGTGAGGAGGACAACTTATGTGGGAAACGAGGTCTG GAACCGAATTCAGAACGACAGACTTTCGAGATGGGAATAACGGTGCGCTT TAGGAATGAANCCTGGAACCGAATTCAGAGCGACAGACTTTCGAGATGGG AATAACGGTGCGCTTTAGGAATGAATATTCGAAGATTTTACAACCGTTGT TATCAAGAGAAACACAAGGTGCTAGACGTGGTCAACAGAATATGTCGCGT CAAAACCCCAGTAAGGATTTTTTCTTTAAGTATTAGTTCTAAAAAAGCAT AATGTGTTAGACTTTCTCCTCCTGTTCCCCTGTTCTCTAAAAAGATTCAA AAGATTTGCGCAATTCGATTTCGTGCATCGGGTTTATTTTTGGGTGTCGG ATTTTGTAGCTAAATTTTCTAAAACCTAAAATTGCGATCTCGAATTCCTG AGAAATTCATTTTCGAAACTTAAGCtccaaagaaatttattttctttaaa atagtaTGATTTCAGCATTAGACGGAAAAAGTTTCACCAAAAAGTCACAA TCTAATGGCAACATAACTGAAAGCTAGTTAATATTTTACGGTTGTTAGCT TActaatgattttattttattttttctcataGATTTACCAGGCAGTAATT TAACACCCGCGTTGGAGCGCAGTGTCAAAGCTTACAACCAAATGAATCGA TATTTGTCCTCCTTCGTAGAGCATGCTATAAGAGAAAATGATTATTTCGT CAAAGATAAATTGTTGTTGGAAAAACTGTTGAAGAATGAATTACAACCGC CTGAAGAGAAGAGTAAGAACAAGTTATTCTTCTATTAGTTTATCAAGAAA TTTCTCGCTGAAAATCTCCTTAAATTTTACGGGgagaattatgtttttca aAGGGCACGCCTACAGTTTAGCCTGTGTTGGCTATCCAGTATAttgaata ccttaaaggaactaATTATCGCTTTTTTCGCGGTTATTTTGCCAAAACCA TGAAAATTTAATTCCtcctgaaaaaactttttcggtcTAAATCAAATTAA NCGCTTTTTTCGCGGTTATTTTGCCAAAACCACGAAAATTTAATTCCtcc tgaaaaaactttttcggtcTAAATCAAATTAAGTTTCAATATGATTGTCT TACttctatgttttcatttcttttagGTGTCTTCTACAACGATGATGGTC GTTCATTCACTTCCATTCTTCTGTACGGTCAAGAATGGTCTTTGTTATTG TTCAATCTATTGTTATTCCTCATCGTTGATTGGTTGTCAGGATGGAACGC TATTTTAGCAGGTTTTATTGCTTACATGGCTGAAATTATTATCACATCAG TACGAGACTCTTTTGGTAAGAAAAATTTAGCCGAAAAAACGATGGTGGAT GAACGATTCttgatttaaaacaaaaactgcATTAGTGATTTACAAGTTTT AGCTGAAAGTTCTGCTTTCTAAACTGTTAACCAAAGTTTGTTGGTTAAAT ATCGTTTACGCTGGCTATAGATtctggatttttttaaataaaggggTCTC AAAAGCGTAATTCTACAATTAAGCTAACAAATTTAATTTGGGAAAAGTGT TGTgataatgaaatcaaaattcgAGAGATTGAGATTTACGATGTTGATGG AATCTATGAAACTAATACTACAATATGAGTAGTTCTTTTAAATGATGATT TATGGTACCTATAAACCCAGTGAAACACTAAATTGCTACATGATGATCAA TCATCTTTCTAACTTATTACATTATTGTGTGTATAGctgtattgggctct tccagaaaaaaaccattcatggggggtggaggatatattgtccaggggta ttgaaaaaaaactgaaaaactgccatgtccatggggtgaatcagcgatgt ccaggggtaaatatttgtgtccagggggtcaatttgatgcttgtccaggg gtaaaacacgtgtccagggggtaaaaaatcgaaatgtccaggggtagatc aaagacaaaataatatatcctccaccccccatgaacgaattttttctgga agagcccattaccCTTTTTGACAGCATTGTTCTAAATGGGTCTTATTTTT TGACggttttgag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017143TCONS_00017143Clytia hemisphaericatranscript
TCONS_00017144TCONS_00017144Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017144-proteinTCONS_00017144-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260supercontigsc0000260:4518..11480 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.67 2.69 1.69 1.32 21.82 15.6 8.56 8.78 4.86 6.98 5.56 4.31 2.59 2.2 2.15 3.43 3.19 3.01 1.82 1.94 2.48 2.28 2.49 3.01 7.01 8.04 2.57 3 2.23 1.85