XLOC_009471 (gene) - C. hemisphaerica

Overview
NameXLOC_009471
Unique NameXLOC_009471
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000254:32037..37239+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009471 ID=XLOC_009471|Name=XLOC_009471|organism=Clytia hemisphaerica|type=gene|length=5203bp|location=Sequence derived from alignment at sc0000254:32037..37239+ (Clytia hemisphaerica)
CTTATCGAGCGATGTTTTGTAAAATGTATTACGCCCAGCACGCCCTTGAT ATGCAGGAGTAGTAAGGGCGGCAACTTGAACGAATTGGTAGACTGTTTGA GAGGGACTGGAGATGAATCACGTGATCAAATTGAAAACCATCTACCAAAT AAGAAGGTAATATTTTTCATCACTTATGTTCCCCTTTAAATGATCATTTT TCTAAAAGTCTTCTAGCAGTGTTAATATAAGGCCataggggggtactagg tttccgaggtgacgggtatatccgagccaaaaatcgaaagttGACTCTTA GAGAGAGAGGAAAAATTGGTACATACTtttataatggtggaaattacgGA AGCTAGGTAACTTTACCAagcatgaaaaacttttttgttttgagctCATT TTTACATaggtgttcccgtttcatatcagacacacatttcatatttcaaa aaaatgtttttcttttttaatttctgatcaatcttgctccacatccgtgt caatccaatgtgaaaaaacttgtcaaacaaaacaaaacctttaactcgTC TTTTGCATCTATTTAGCTTGACCAGACCAGCCAAGAGGACTTACAAATAT TGCACCAGTCATCTTGTGATATTCATAAATTTATCCAACTTTTTCATCAA CCGTACATTTTACTGACCCAACCCGATGTTTCCCCGATATGGTGTCCAGC AGCAAACGATTATCAAATTCATGAAATCCGAAATACAAAAATCGGTGAAA TCGGGAAACACTTGCAATATTTGAAATCAACTGGAATCaagatttttgtt tgtttattgccAATGGTGACGACACTAAATGTTATACACGCAGCTCACAT TGTCGAGGTTTCGAGCGATGACTATTTGTGGATTTTGCTGGAAAAcgaaa tttcgaaatttgatgTTGAATTTGAACCGATCAATGTGTTTTATTTGCAA ACAAAGAACGAAAGTTTTTGTCCAATGTAAGTAAAACATCAAAagacaat ttttatttttaatatacCGAGAGTTCTCCTGGTCCTCCTGTTGTCGACGA ATTCTGGGCTAAATATACGAACCTATAATTATAAAGTACGCATGCACTGT CTACTGATAATAAAATGTAGTAAATCGACTTAGGAAGACCAGGTAGTAAc catgcaaaataaaagtttcCGAAAAGTTTCCCTCCCTGGACACCCAGGCA AGGATTGGAACTGATATCCTATGCCATTCGGGCTGGAACAATATCAGGCG GGAAAAGGGAGCTTAGAATCTAGGTAATCGTACGAAGAGAGATGGAAAGC ACATTTTCACCAAAGTTTCATCACTCTTCAACGAGGCCCATCTTTGATAT ATTCTTTTTAAACTTCAGGTCCAAGTCATCAGAATTGCAAACTCAATCTG tattgacaatcaaacaaaaatcgAAAGATCATCCAACAAGATCCACATTA CAAACCATTGGAAAATTCTctgaaaacaaaattgaaaaatcagaTGAGTT GATTCGATACACGACTAATTTTCGTccacaattttttatcaaatatccTC AAATTCGAATAGTTACTGCAATCGATCCTCCATTCGTATCCTCCATTCCG TTATACAATGAGAAATGTCATGGTCGCAAATGTATGAAATatgtgaaaaa tctacaaacgggagataggaaagtagaaaccTTTTGTTGTGTTGGTTTGT GTATTGATATGATGTCATATTTGGAAACTGATATGAAAGCACAGTTTGAA ATTTGGCTTGGTAGGTGAATTACTGGTGAATTTATGGGATGAGATGAAGT TTTttcaagctcttatttgatttggttggtcgttaaccagtaataaaaca attttgttactttttctaaagaatgcatcatttctaatttctcaaattac caatcattaaagtatcttataaaaactccatctcatctggaaTGTATAAA CAAAACGGGCCCTTCCTGAAAGATGGGGGCTGGAGGATAGACTATTGTCC AGGGGTTATATTGATGTTTTTCCAGGGGGGTTTGACCTTGTGAGGGGGTT AATTTCCAAAAACTATTTCAACACCCACCccaaatattcaatttttttat tgagaGCCCAatactacaatcatggacaaaatatttgagacaaaggggat ttccctgcgaaatttcaaacaccacaaatgattttgaaGCGCGTTAACTt ggttaaactacagttggaaagaaGAGTTaaatctcaggatttaaaagctc aaatttcaaactttaaattctgaaaaatgttagaatactaaaatctcaat atatttcggccATGATTGtactttcttttgatttgattgcAAGTGTGAGT Gagttttaaggttttttaaaataggccgtggccagtggatggttaaatgt tcaaaaataaagaaaaaattcaaaatgtctttgACCAAGCTTTGGCAatt gattttggtcaatttgagggGCTGAATCCGAATTTGAATCTTACTAAAcg tgaaaacccgcagtttttgtgtaatttttcaattttttgcgtttccaggc aaaattgcaaggcttGAAATaccatgatttttggggggtcttcaaattag aaaaagacctataccacgcTCTTCAGACTGagcaaaaaattaatattact tcaaagtctcaacttctctagatcaaaagttatgggcatACTTGTGGTga aaaaaggtgtttaattttgcataaattatgcagattgtggagaaattccc tgttttccatcagtttttgaccacaaaaacgcccataacttttgatctag agaagttgagactttgatgtaatattttttttctgctcagcctgaagagc tctatcacgtgatATAGgtcccccaaaaatcatgaattttcaggcattgc aattttgcctggaaaagcaaaaaaatcgaaaattacgcaaaaactgcggg tttgcaagcttggtaacattcaaattccaaatcagtaccctcaaattgac caaaatcaattcTAAAAGCTTGGTcacggacattttgaaaaaaggtgAAA CGTTTTGTTGGCACTGGCCATGGCCtaaaaggttttaattttttaaggtt ttttaaggttttttaaggtttttagaGGTTTTTTGGAGGTTCttcaaagg tttttaaaaggtttttttaatgtttttaaggTTTTCAAAAGGTTTTTTAT AGGTTTTGCAAaggttttttaagcttttttgaaggctttttaaaggtttt taaatgttttttatggctttttgaaggttttcaaaaaattttttaaaggt ttttaatAGGTTCttcaaaggtttttaaaaggttttgtaaaggttttttt aaaggtatttagaggttttttaaaagttttcaaagacTTCTAAAAGGTTT Tagaaaaggttttttgaaggtttgttaaaggttttcaaaggttttttaaa ggttctgcaaaggtttttaaaaggttcttcaaaggtttttaaacgatttt ttgatgttttttgtaaggttttcaaaaaaaattttatgggttttgtaaag gtttttttaagcttttttgaaggctttttaaaggtttttaaaggtttttt atgGCTATTTGAaggttttcaaaaagttttttaaaggttttctatAGGTT CTTCAAAGGCTTTTAAAAGGTTttgtaaaggtttttttaaaggtttttaa aaaggtttttgaagttttttggaaggttttcaaaggtttttcaaaggttt ttttaaggttatcaaaagtttttttgatgttttttaaggttttcaaaGGG TTTTTTATAGGTTTTGTAAAGGTTTTTCAAAGCCTTTTTGAAggttttca aaggttttttgaagGTTCTTAAAACGTTTTTATAGGTTTTGTATAGGTTT TGTAAAggttttttaaagcttttttaaagcttttttaaaagggtttttaa agggtttttaaaggttcttcaaaggtttttaaaagattttttgatgtttt ttttaaggttttcaaaagtttttttatgggttttgtaaaggtttttttaa gcttttttgaaggctttttaaaggtttttaaaggttttttataGGTTTTg caaaggtttttttaagcttttttgaaggctttttaaaggtttttaaaggt tttttatgGCTATTTGAaggttttcaaaaagttttttaaaggttttttat aGGTTCTTCAAAGGcttttaaaaggtttttaaaggttattaaaagttttt ttgatgttttttacgGTTTTCAAAGGGTTTTTTATAGGTTTTGTAAAGGT TTTTCAAAGCCTTTTTGAaggtttttaaaggttttttgaaggttttttaa tgttttttgaaggttcttaaaacgttttttataggttttgtaaaggtttt ttaaagcttttttaaagcttttttaaaaggGTTTTTAAAGGGCTTTTAAA GGGTTTTTAAAGGTTCTTCGaaggtttttaaaaagttttttataggtttt taaaggtttttaaaggttttttcaaacgttttttcaaacgttttttcaaa cgttttttaaactaaaattgcagACTTTTTCGTTTACTTGCCATAtatat tattttgagacagacttaaTTTATTTTCACGATACTACCTACAAACaagt ttttctaattttgattttatttattaGTGGAAGATGGCTTTTATGGCGCT AAAATTAACGGCACGTGGAATGGAATGGTCAGTGACGTCGTTCAAAATAa agctgacgtcatcattgcGCCCTTCTTAATGACACGGGACCGACTTTTAG CTTTAGACTTCACAGACGAATCATATTTAAATGGTGGAATGGCACTAGTA ACCGTCGCACAGAAATCTAACATGACCCTTTTCAATTTTCGAACCTTCCA GCCTCTATCTGCATCAATGTGGTTTGTTTTGTTATCCTTGACTTTAGNAT TCCAGCCTCTATCCGCTTCAATGTGGTTTGTTTTGTTATCCTTGACTTTA GCGGCTAGTTTGATTGTATATTTTGCTGAGAAGTTGTCTATCAAAACACC TGTGTACCCACTATGGGAGAGTGTCAACTATTTCACTGGATTGGCTTTTG CCCGTGATATTGGTGCATTGAATCCAGTGAAATTGGGTTCGAGAGTGATT GGAATTAGTGTAGCTTTGTTTATGCTGATTGTCATGTCAACCTACACTGC TGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016911TCONS_00016911Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016911-proteinTCONS_00016911-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000254supercontigsc0000254:32037..37239 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.64 0.73 0.41 0.28 0.04 0.03 0.04 0.03 0 0 0 0.09 0.61 0.6 0.02 0.02 0.06 0.13 1.8 2.01 0.11 0 0.26 0.09 0.24 0.13 0.11 0.12 0 0.09