XLOC_009355 (gene) - C. hemisphaerica

Overview
NameXLOC_009355
Unique NameXLOC_009355
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000248:303704..307327+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009355 ID=XLOC_009355|Name=XLOC_009355|organism=Clytia hemisphaerica|type=gene|length=3624bp|location=Sequence derived from alignment at sc0000248:303704..307327+ (Clytia hemisphaerica)
TTCAGAAATATTAAACATTTCTtaacacaaaaaaattcaatatttacaaA
CGAAAAATCGCTAAACTGGAATCCTCTTACTCATTACAATCTTTCCCAAG
TGATGCACCCCGAAGACAGCATGGACTGACCAACTCTAATTTTTCAAACG
GTCTAAAGAAAAATAGgttagtattttttttgttatttactTACCATGAT
AAAAACAACAAATGTGTAAACCCCTCGtttaaacttttcaactttCCTAT
TTTCAATTGTTATTATAGTTTTGATGCTAGTTCTTCACCCAGGCATACAT
CGGaaaatggaataaaaagattttcaaatcgAGTGAACAATCAAACTGGT
TTTGAACCAAAGAAAAGAGATTCAACTCAGAAACCAAAGAGATGGGTTCC
TTCTCAATTGATGCACGATGTTACAGATCGCAATGAATTGATTTTCCGCA
GGGTCAGAGGGTAAGTTTTTAACAAAATGTtatcaacttcagttgagcta
gaatctgactatatctgtatgtatgtatgtatgtatgtatgtatgtatgt
atgtatgtatgtatgtgcGTCTCTCTGTCTGAAAACTTGAGGGCAGTCTG
CAGTCATAAAAAATCGTCCGTTTTgcctgaaatttggcacacttgttcgc
tccttgggtgaatattttagggtgttttttcatttttcaaaaattttgat
ttttgggctATGATGAGTTAAACGTGGCTAAACCTTGAGGGCCTTTTAGA
CTGATCAAACTTAGCttatcaattttacaattgggcctccACACAATGCA
AATATTCCTGAATCTCGGTTGAGCTCTTTTTCCACTATCAACAGTTTTAT
TAAAACCATGACGTTTATAAAGGCATTCAgatgttttttatcttttcgaA
TTAATGGTCTTCTGTAAATGGTGGTTTATTGTTTATGGTTATTTATTATT
AGCTGATGTCGTATTTCATGTTGTTTTTCAGCATATTGAATAAGCTGACA
CCTGATAACTTTGACAAGTTAAGCTACAACCTTCTGAATATTGGAATTGA
CAAGACTGTTTTGAAAGGAATAATTATCTTAGTGAGTTTCCTTTGTATTT
gattttcacttaaaattcTTGGGATAATCCATGTAATATGTACGCAGAAC
TTTTCCTTATATTTGACACCCTTGTACGCAAGAAATAACaccatttaaac
aatagatgtgcGCTTTTGCTAAACTCCCTCTTCCCCATTCATTGCTGAta
ttgcgtacgtactataaaGATAGCCCTTGACTTGGGTGGACTCATATTTT
AGCCTGTTTTGATTGGATAAAGTATGATAAAAACAATGATTTATGCTACG
GTCAACATAAAGTAGTTTTTTAAACAGCAGTGGTTCAtcagaaatttgat
ttgaaCGCTTCAATATAAAGAAGATTTTGTGAAAATTCAAAGGGCAATTG
AATTTGGTTAGAAACCTATCAAGAAAAGTTTGATTTAATGCTACATTGAT
TTCATTTCAGATTTATGAAAAAGCTATAGACGAGTCCAAGTACTGTAACT
TGTATGCTCAACTTTGTTTACGATTACGCCACGATGTACCCAATTTTGAT
GACCCTGTCACCAAAACAAACGTAAGCGTTGATTGCTaatttattttgtg
atttttgttgGTGTGATACTTTTTAACTTAACTTTATTAACTGATCTTTC
TCAAGTTTAACATTAACATATCACTTTGTGTAAAGTCTCGTAGAATCGTT
ATCAACTTTACTATATTGATTAGCTAAGGTCTTAAAAATCAGTTGTCAAA
GTTATCATATGCTTTATACTCGTTGATTTGAATTTGATGTTTACCATATT
CCTGAGGCTAATCTTGTCCAATCTCATCTTGTCTCAAGAGTTGACTTTAC
CTAATTCGAATTTGAACGAGGAATTCTATTTGTTCGAGTTACTgagagat
tcaaattatagaaagtattttgagAGGGTTACTTCTTGATGGAgactgga
aacaagttcgaattaatATATTAAGGTTCAAatgatagaagttcgaataa
gcgagagtttacTGCAGTGTAGGATTTTAAATTAAAACCTTTTTGATTCT
TGTccaattaatttaattttcctATCATAGACCTTTGTGCGGCTGCTGCT
CAGCAAATGCCAAGAAGAATTCGAGACAAGATCTAAAGCCTCTTCTGCTT
TCGACAAAAAGGACACGGACCTTTCTCCCGATGAGAAACAGGATAAAATG
gtggcaaaaagaaaaatgttgggAAATATTAAGTTCATCGGTACGCTTTT
TATAAGANAGTAAGAAGAAGACGCACAATATCAAAGTTAAATAGTCCTGC
TGCTGAGGTcgataaatgtttcatttcgtgacacacatcttagaagtaac
tttttttggtggaaactcgcgaattagtatatttagattccaaaatcaaa
aagttaacgaataattgatttttgggggtcttcaaattaaaaaaagacct
atatcacatgatagagctcttcaaactgagcaaaagagtgtattacacca
aagtcccaacttctctagatcaaaagttatgggcctatttgtggtcaaga
actgatggaaaacagggaatttccccataatcggcattaatttatgcaaa
attaaacacctttttgaccacaaaataATAGGCCTgaatgaatttccagg
ccttgcaattttgcctggaaacgcaaaaaatcgccaattactcgttactt
gcacgataatatcgtggaaactttttgattttggaatctacatatactaa
ttcgtgagtttccaccaaaaaaagttagttctaagatgtgtgtcacgaaa
attgttttttagccacttttttcgatctcagcagcgggacttAAAGTCTA
GAACTTTTAATAAGGCaatatacatttttttttgttaatttacaggAGAA
CTTGGTAAGCTTGAACTGTTACAAGAAGCAATTCTACACAAATGTATTCA
ACAGGTGAGAAAAAAATTAGTGTTTTTTCTGGACGAGGTTTAAAAATCGT
CCAATAAATCTCAAATGTAGCAAAATTTAATTAGATAATCGGCCAATTTT
ATGCCGGCTCTTATTGCGCCAAAGCTcattctttttcagtttttagcCAT
GCCCTAATTTAATTCCGATCCCTTACGTCGGCTACGCCAGCAACGATAAA
ATAACACCAATAAGAACTGGCGTAGAAACAGCCAATATGGTAATCTGGAT
GATTAAATTAACCTCTTTGGTACATTTGACTCTCCGTCATAGATATAAAT
TCGAACATCGAATTGATCATGTAAAATCTTTATTATCTAATTATCAATGT
ACTTTCTTCCGAATCAAATAATGTACCATTGTTAGTCCTATAGTAGATCA
AAGTAGTTTCTAAACTAAATAATACTTTTATACAATACTCTAGTTGCTGG
CTAAGAAAAAGCGAACATCATTGTCTGAGATGGCAGAGGATATCGAATGT
ATGTGTCAAATAATGTCAACCATTGGNAAGCCAAAATTTTCGGGGACAAT
TGTTGCCTGGTGACATTAGCTGGCCAACGAAGAAATTTTCTCATATTTTG
CACCTTCCAGGCACCATCAAAcgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016732TCONS_00016732Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016732-proteinTCONS_00016732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:303704..307327 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
121.89	115.35	123.31	119.71	168.27	127.3	95.01	102.71	72.85	88.49	77.75	77.41	58.93	66.58	62.11	64.06	75.59	85.56	59.9	69.32	68.96	72.05	65.94	71.39	80.49	75.46	72.46	75.9	81.35	87.31