XLOC_008540 (gene) - C. hemisphaerica

Overview
NameXLOC_008540
Unique NameXLOC_008540
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000208:273487..275685+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008540 ID=XLOC_008540|Name=XLOC_008540|organism=Clytia hemisphaerica|type=gene|length=2199bp|location=Sequence derived from alignment at sc0000208:273487..275685+ (Clytia hemisphaerica)
atttaaatcaatttcaaaCCAGTGAAGAATCGAAAAGAGGAAAGTGGTCA
AACTGTACACGAAAGATGTTTCAATTAGCGTTTGTTGTGAGCTTGTTCAT
TCTAGCTGCATCAGGTGAGatttatttgaatatttctatattttatcTAT
AAGATGGATATATCTTTTTAGTAGAGGATGAGTAGAAGCACAAATACAGA
AATACAGAGTACCCTTTATAAGTTAGGGCCAATTAAATATATGGTGTATT
TTCACAGTTTCGCTGTAAGCATTTGTTCCTCAATTTATCCCTAAGCGATT
TCGATCTATCATTTATTTAGTACACATAAAATTGGGCATTGGACACTCGT
CGAAATCAAATCCTTAAAAATGAGTCTTATTGATCTACTTTAGCTATCTT
ATCGGCCCTTtctacaccggcccttattagcgttatttttgagctcgtgg
cgtaataagggccggcgttaaaagggccaagattatgcaattttaactta
aaagcggcgttaaatttttatcattatttctcaatttaaagaattttaga
tATGATTCGAAGACGAACATTATCccttgttttactccatatttaaaact
tcagtgaaatattaaatcagtgattttcgatggaattttcaacaatttaa
tgctgaaaaatgatattttaatgtaaatctTAGCCATTATTTACCAATTG
AAGCATAAGTagtcatttttacaaattttggcgttatcaACGGCCCAAAA
TTGGCCTCTGGCGTAATatgggccggcgtaaaaagggctgataaggTATG
GAAATACCAGATTATACCATTACCAATAATTTCAAACGAATACCCCCTCC
CAGTCCCGATAAGGAAGTTGCatatacgctttttttataagaacatccag
actttttgaagccttaggatgttcttaactttttgagttttaagcttcct
aacatgtttttatttttgccattttttagtatttttgtccaaatttgttg
ttctagagcccgcaaagtcttaaaatgttgttaacttgttcttaacattt
tggtcatcgaagcctgatattcttaaatagtttgttcttaaaaaaaagca
aaagggTAGTTTACCTTCCTATCGTTTTTACTTTGCCTCTCTCATTCTAA
GTATACATTTACTTCCTTATAATAGCGAATGATTGTGAAAAAAGCACATA
CGAAAAGCTTGGATGTTTCAAACGACAACCAAAACTGTTACCAGATTTAA
TCCTTAACGATCGTGATCCTACACATGATAATTACACTGGAAGAAATATT
GATTGGGTTGAATATGCAAGCTACTTGAATGAGTGAGTATTATTGATTAC
AGATTACTGTAAAGCCCGAAAGGGCTAGATATTGTGCTTtcagctcttcc
aagcaaaaaaagtgaatatcacaaaaaatattgctggcattgttttcaaa
aacccgcgaagcttattacaagcgctgaaattctattgtaatgtcattTG
ATCTAGGtaagatttcctacctaacctcggcacacttttcagccaatgCA
CGACATCTGGCCTTTTGGGTTTTATGAATTTATGGACGAAACCTCTCAAT
CAGGGAACAGGTAAGTATGATTTCCTCCATGCTCAAGTTGAAACGCTTAG
CGCTGTCCAGATATTCCTAGTTCTTTTCACGCGACACACAGTTACTACTG
GTGCATATATAACGATGACACTTGCTCTTGCATAGTGCTCTTCACGATCG
TAGAACAATAACGCACCGATATTTAGAGCTTTAACTTGATGGGAAAATCA
ATCTACATCATTTGCCAgatagattttgaaattggtaATCATCCCGGAGG
GTCTCCTCCCAACTGGAAATCGATTACAATCCTCATGAAAACCATAGTTT
ATATTTCATAATTGGTTTTAGATTTACATGCCGTTGTTCAGACAAAGCCA
AGAAGATGGGTTATAAATACTTCGCCCTTGGTTTCTACGGTGAATGCTGG
GCTGGAAAAGATATGAAAGAATTCGTCAAAGTTATGAACGACTTTTCTCA
AGGTTCAATGAAATGTATTAATGGTAATTACTGGGCTTGCGACAATATGA
CGACTTCACCTTGCACTGGAGGCGCCAATACTGAATATATTTATTTAGTA
GTAGGAGATgatgaagaaggagaagaataAATCTTATTTTAATGCAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015269TCONS_00015269Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015269-proteinTCONS_00015269-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000208supercontigsc0000208:273487..275685 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.11	0.27	0	0	0.22	0	0.14	119.16	82.38	119.27	295.48	9.24	13.97	224.95	196.86	53.37	49.46	63.17	63.63	87.27	104.08	0.14	0.15	1.85	3.3