XLOC_007522 (gene) - C. hemisphaerica

Overview
NameXLOC_007522
Unique NameXLOC_007522
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000168:22580..33101+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007522 ID=XLOC_007522|Name=XLOC_007522|organism=Clytia hemisphaerica|type=gene|length=10522bp|location=Sequence derived from alignment at sc0000168:22580..33101+ (Clytia hemisphaerica)
ATAACCTTTGAAGTATGACGTAATTGTAAGCAGGATTTTTCATAATGGTA GAGCAGTTACGGAAGCAAAAAGTAGATGCACCAGCAGGCAGGGTACACAG GTTGGTAGCTGCTTTGACTGGTTGGACGTTCACTAGAACTCTGGACAATG AATACTGTTGACTATTAGCAACTTTTCAAGGTAGGCTTACCATCATCCTT TTTATGTAGAGCACATATTATTTAGTTAGAGAACTGCACACGCGCATACA TACTTTACTAGCTCTCTTATACccaggcagttacatcaatatgccttctt acctgtctttaaaaatataaataaaagtaatcacggaaaaggacgcgaaa aaaaaagacataagtgtgagaacagagtaatcaaactcgttagaaaaagt accattagaagtcataaaaaatcaacctgaataaatgcaatcgaaatccc acccagagaacttcataaatccccaaacaacattacattactatgtcaaa ctcccattacataaattttacaattacgtcagagtaaactacgctcgcca ccgaagaggtttatttggaaagggtaattacattttattgttcgcttctt ttttaaagattggccgggttggaaaagtatgaatttctNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattta ccccctggtgacttaacaaaagagacttaactcgatgttacaatccaatt attgaaagtttgtctcggcctttttataatgagcgagacatacgatctct gattacgcaattttcatattgacattttcgaggcattttgatgtaactgc caggacgatctcaatcgaacggaatcgacgatcgaaccaggcgaaccaaa tcgaacgaaatcaaccgattgaaattgattgtcgaacgcaattgaatctc aatcgaaattcaaaattctgggtaatattcgattgggttcgattgtcgtt cgactggttcgatcgtcgattccgttcgattgagattgtctgggctttat tcttgcagcttcccaacatccaagctctcaaacatcacaagccgaatgaa attactttcgatttcccgtagaaattatgtgATGAACAATCCAGGGGTCA ATGAATCAACGATCGAACGcagcaatcgaacatcaatcgaatgcaatcga atatcaatcgaatctgaaaattgcagtaatattcgattgcgtttgacaat caaatttcaatcggttaattgcgttcgatttggtttgactggttcgatcg ttgattccgttcgattgagattgtctggttaTACCTACTGATCTGGCTGG ACACAACAGGACCCTCGCCCTGTCGCCTCTCCCCGGACAATGCGGGGAAA ATGTCCGGGGAACAAAACAAATGTTTCTATCTCTCGACTGTCTGTATGTC CGGGACAACAATTTTGCACTGTAAACTTACCCCCGGGCCAGCCCAGGCGT GGGCTACCTTCTGAAATTTCTCCCGCACGttcaacaaattaaaaaatgaa gcgATCGCGTGTGCGGTCTGTCCGGAGCAACTTCTCAAAAGTAATGGTAA AATCCCCGGAAATGCAACAAGAATCCCCGGACATGCAACAAGAATCCCCG GACTCTATGGGGATGCAACAGGGTCGTGTTACTGGTGGGTACGGTGTAGG GATCATGATTGTTGACCCTTTTGGTGTGCGATGGCTCCCCTGCCCTAATG AAAACCGTTATTGTCATCCTTTAAGTACACACAATTTTAGAACAGACTAT TGAACAACCTCATCAACCTCTGTATAAGTATACCCACCtatatccagacg gtgtcaattgaGAACGAATCAGGCGGTCATTGataaattgttctattcgc gtcacctgACCGCATCAGATTTTCCGcagattttccggtgcggagatgcg gaaaaaaatctgggaaaagcaatttgttcttttaaagtatagcttttttc tcaattgctctgacgctCGCGTCACCACCCGCCCCTGAATGACTGACGTG ATTAAAAAACCCAGGCATTTTTTCGACCGCCCGTCCGCttgcatgcattt ttaacagcttttgcgacgcgaacagagcatttttttgaTGACCGCCTCAA ACGCCGATTCAATTGGACGCAACCAGAACAATAGAATATTACCCAGGGAt cactcctttagagcttttttagtgTGGGCGTCCGAGTGTTTTATGTACTG GCAATGACCAGGTTGTTTCACTCAATATCATcgataatttttttccaatt gatAACCAATCGATGGATTGGCTGAATCTATTGATTCCGATAATCAATGA TCGACAGGTACCTGACCACATCATTAACTGACAACAGTATAGTAACAACA TAATAAAAAGTAatgatatgttttgattttccaacgcaaatgaaaatata atttaagAGGCATGTGAACGGGCGACACTGCTTTGAATGTCACACTTATT TTATCACATTAAATTGTCATCTTGACATTCTTGCTgtcttgttttgaaaa aaactttcttcagagttgttcaacttggagatgGAATATTGgtaaacata aaaaattttAATGGCAGTGGTCTGGGGGTTTGGAATTAGGATTGGCTGTC AGGTATAGGAGCTCTCACGGTAATTGATAATCACAATTTTGAGGGAAGGC TCTTTATGAATATTGATTGAAGGTTGCTTAGTCATTGATTGGCTTGTGTT GTAGAAATGATTTGATTAATTACTTCAGAAGAGGccatcctgttgaataa ttaagtagtccagcagaaaaacaatgatatagccatagtataattattac aatatgcacgatacaataattatgcatggctatattATTGTTTTCTGCTG AATCTTAATAAGGTGAATAAAGAAGCAATATAACTTCTGATCTGCAAAAC GTAGATTAAGCTAGAATGAAAACAGCTCATGCTATGTGACTTCTGACTTT AAATAAAATGAGGACTAGAAAATGTTGTAGACTGGGGAAAGTTACCCCTG GTGAAAGTAACTCTGTTTGTAGACTTTTTGCCAGATGTGATGACATGTTA AATAACTAATTATTCCAGCATAAAGGTTTGATTTAATTTGTTCTGAGGAT GTGTAatgaatataaaagaaattaaaaaaatttaaaaagaaaattgggCA GAATACTGATAAAAATCTGGTACTCAATGGGCACTTTTCTTGAGGAAGGA TATCATCTTCAAGCATCACACAGTAGGTCGCAAAATGCttaattttgatt tatgattttagAATGAACTAGAGGAAGAACAAGATATATCAGAGCCAGAA GAATAATCAGATGAGCAATATCGTTATCATTTAGagttcttttacttttt tttcaatttactgTATTATGGGAAATTATGTCTTTAAATAAAGACTACCT AATAGGGAAGCCATAgttcattttgtattttaaatAGTATTTGTGTAAGG AATACCAGAGGTTTGTTTCCATTTGCATAGTAACTTATAGTTACTTGTGC TGTggctttattaaaaaaatatagcaaaataaaaaaaatcatcttcATCT TAAAATCTGGAAATAAGTTACATCTGTATATTTGTTAAGAggaaatgttg ttttttttcagaacaAGAATGGATGGCAAGAAGAGTGACAGTAAAGCAGA TGGACAGGGTAATGTCATTGTTTATGTAATTATTTCTTTATTAATATGAT ATCCCGTTATCCATGTTCTATATTATGttgttgaaaattattttccagtA TGGCGATAATTTATGGTAAAATATAAGTGTTAATGAACTATTGGCTTGGT ACCCTTAATTTCAGAAGCTTTCACAAATCAATCAATAGAATTGGAGGAAG TGCAAGCCATTGAACTTGCTGCTCTGAAAAGCCTTGGACAGCATTATcaa gaaaactttcaaaataaagcaaagcaagtaagaaaccaaaaacaaccaga AAAGAACAAACAAAGAGTGATTCGTTTGAAAAGAGACGTTGATGACACAC GAACATATCCCTACGGAGGAcagaaaaaaagaagtaaaaagaGTCAGCAG ATAGGTGTGCTTGACCTTTTATTTTCCCCATATATACTTattaaagatca aataaaaactaattttctctgTGTATCTGCATCATCATTCTTGTTCAGCC AAATGGCCTTATTAGTGGATTTTCTCTGACACACTTAACTATTACTTGGT ATATGGGAGGATTATCCTATTGATGATTATATTTTTCTGCTTTAAGATGG GAAATGGGAAAAAACTTTTAGTAAtggaaatgttttttcttttagatgCA CATTCTGATGGTACTGATACTGAACTTGTTGTACATTACGATCATCAAAC TTCCCTAGACGGTATTTAtagtaaaaacaaaaacgttTGGGAACAGATTT TTAAATGGGAACcaagaaaataaacatttataGTTATGCCTATTGGTTTT TTAATTCTTACTTACATAGCCATGCCTTATTATCACTAAAATGTAGCGGA ATATTTCCTAAGGAAAACTTGTTTATTTTACTTTCACTTACTTTCTACTA CATTGTTTTTTCGATCATAGAAATGGAGGCGTTGAGTAATTTGGAGTTGA CAAACGTCCTGGACCTCAAACTTCTGGCCAAGCACAAGAAGAAAAAGACT TGGAGTGAAAGAAAGAAGTACGAAGAAGATCaatggaaagaagaaagaga gGGAATCTTTCGTGATGTTGTTGAGTCGTACTCAAATGAAGGATTGTGCA ATTTTTGTCATGATAATCCTGTTTCAATCAAGTGTTTGGATTGCTTCCAA AAGAAGTTATGTGCAGCTTGTGATGAAAAAATACACCAATTTGATACGTT GCACAATCGTGTTGGATATATAGATGGGTTCATCAGAACAATGCTACCAT CTGAAGATCTTGGAGCAGACTCTTCAATAAATGACAAGTGTATGTTTTAC ATTGTTGaacattttgatttgattttgatggaTCAAGTCAATATTTTGCA TTGCTTTTGCAAGATCTGCAAAAAGCCTTTTATATGTATAGATtggaaaa atcaaatgattttatTCATGTGACCTTAACAATCATTTTCTTTCTAATTC TAGGAAGGTCTTCCCTTCAAGTATTTACAACAAGATGTCTTCAATGTGGC AATTTAGACAATCCCTTTCGTTTCAAAACCATATATGAATCtgggttttg gccaaattcaCCCAAAAGAGTCAGCTACCTGTTTGATCAAGAGCTCTTCC GATTCTGGGATACTCTGCGGAAAAATGCCCCAGGAACGTCTGAGAATGCG TTTTTGGAGGTTTTGAACACGTTGGGCAAGTTCCATGGCAGGGTGAGATA TTGATTTAGTGAATTAATTGATAATTGTGAAATGGAATGAAATTTACTTA TACGAGCTTGATTAATCAATCTATATGCGCTGATTTTTTTTAGACCGGAA GAATCACTCCCTCTATATTCTCTACGGCCTTCAAAGAATGGTGCTTCTGC CAATACAAAATCGACTGCCTCCAAAATAAGAACTGGTTGGAGTGTCCTGC ATGCGCGTACCAGCAACACTCTTCCCACGTTGACGGGAATTGCAAATTGT ATCACTACAAAAGTTCAGGAAAGTGAGTGCTTTTATCACtatcttttttc aactttttcttatCACCATTTACTTAAGCTATATATTGTCTATCTATGTA TCTGTATTTTATTTGCGTTTCTGTTAGTAAAGTAATGAATTTTACGTGCA TGCGATCAATTTAGTGTGTATGGTTTATTTACAAGGTATATTAACTGcga tatttcataattttagacGAACAAGGTCTGACTTCTATGACGGTTTATTC ATTGTTCAAGATTCAAAGGTGAAGGATTATATCGACGAATTGTACGATAG AAAACTTGGAAAGGTGAGTTATCATCATCTTCCGTTTGATTATTTCATTG TTGATTTGGATATGGATGTGTATATTCATGAAATTACTCAAGCACGTAAA CAACTATAACTCTTATGAAAATAGCACTTATAAAACATGCGTAAGTAAAA CGAAAGTTTGAgctcattttgttttgaatcgaatttattttttaaggttG AAAAAGATGTTAGGTGTGGTGGTGATTGGAGTGCCGCCCGAAATACCGCG AGAAACAAAAAATCTCTTGACGTCACTGGCCTTGAAGTGATGTCCTGTCG TCATCAATTAGGTCAGAAGGCATTGAACATGCACCAGGGAGAACTCTTTG GGTATAGCTTGTATCTGATCAAGCACCACATGCTTCCCAACAACGTCAAG TTCATCTTTGCAGATGTGATGTGTAAATTGCGCAAATTCATCGAAAGAGT TGACCCGGAGACCGCCAAAAAGTTTACTGGAGCATTATCAGTAATGCATG CAAAAGGACATAGTCTAGATTGCCAAGTAcatgtttactttttttatttc tcaaaaacattttaatttctttattcCTTTAAAACATTTTAGTTCTTCTG GTTAAGTGATATAAGTTATTTGATAATGATCCTGAGACAATCTGTCTTTG gtataaaatttcataaatagGTCCAATGACTATAAAGATTATTTCTTtta acttaaaataaaaaaattccagatCATCTAGCAATATAATACACGAGGAA TGAAAGAGAAACCTACATATTTTTGGGGAAGGGTATATGAAATTCCcctt attattatattattatatctatccatcattatttttctttattcaacAGT TTATATGGGACGGTGAATGGGTTGATGGTACAGGCCGATCAACTGGTGAA GAAACCGAACAGATATTTAGTTTCCTGTCAAGGTTCTGTAATAcaacaaa ataccaaaaaccAGAGAGTAAGTATTTACTTAATTGTATTATCTAAACAA GTTGCTGTAAAGTCTTTCTGCGAATAAGAAAGGTTTCATATTTTGGCTTG ATAGGTTAATATCCCTGGACGTAAAAACTTTAACGGAAAATTGTCACATA ATATTTATCTATGTAACGATATCCTTggtatttatatatttatattcTCT AATCTTACAGATAGAGAGGAGACGTTGACTGAGATGATACTGTTTTGGAA TAAAAGGAAAATTGAGGTACAAGCAGAACAGTTGGTCAAAAAGTATAACA AGGTAAGCAAAAGTATCATGAAAAGTTTATTATTGTTGAAATGTTTTATC CCTCAAATTTAATggctaaaaaagtttttactgtATTTTTACTCTTCCAC ACGAGCGGCGTGAAACTTTAGGTTCTAAAAGATTAATCAAAGTCTCTTTC TTGCATTAATTTGAACAAGCTCTGAAATCATTGGGCACTTTTGGCACAAA GAAGAAAATAGACTTGTACTGTAAAATAAGAGATTTTTGCTGAGAATGGT TAATTGCACTGGAGTAATCAGATTTCCCATTGTTTTAATGATTTTCGTAA ATCGTCTCTGGTAGAAATTTATCTCCTCATTAGTGATAAAGTATTTTGAT CCTAAAATCCGAGTTGCTCGTAATTGAGACCGGCCATATTTTCTTTGTTA TTAGGTTCAAGGTGACTTGTCAAAGCATCAACAAGACGGCAATAATGCTT TAGATAAATTcgaaattcagccaaatttcgcAGAATTAAAAAACGAGATC AGAGATATTGCAGCAAATGGTAGGCCTTTTATTCGTGTGATTGGCCCTGC GTCCAGGAGACATCTTTTCATACAAATACATTGATTGCCTCAAGATATAG GTTGCACAATGATCAAAAAACATCGAAAGTCTGTAAATCCCTATAATAAA ACgtaaattcttttaatttttgtttcagtATCGATACCACCAACATCGTC TCTTAGCAAGTCGGATCAAATTTTGCTGCTGTTCCACGATCTAAAAGGCC ATGTTTCCAACAACGAATTTGGATTCCTAGAAACCATTTGTCCAGAGCTT CCTGATCTATCTGCAATTAACATCCAAATCctgaaaaggaaaaggaagaG AAGATCAAAATTCTTCGCGAATTGATTTTATCTACAGGCTGCACAAGTGA TAATGTGAACATTGTCCTTAATGTGAATGACGTACTCGCTGTGGTGACTG TTGGTTTTCAACGTGCGATGGAAAATACCTATTTCGAAAAAGTCCATTGG GTTACAAGGATAAAGAAAATAGCAGGTAATACCTTTTCTCCTTTTGCAAG CTCCTTTTATATGCTTCAGTTTGCTGATCACAAAAACTATTTTAACTGAA TGAAAACTTTATTTCATCCATTTTTTTAGACACATCAAAGCAACGTTTTG TTCTTCGAAAGAAAGCTGCTAAAGCAGACACGTCGTTGCAAAATTTGGTC ATCCTTTACAATACGTTTGCAAGAGTTACAGTTTCTTTCGATGATGTGAT TAAAGGCTCTTTCGAATGGATAGCAGAATTCCAGCACCAAATTTACCCTC GTGGTTTCACAGGTGGGTAAATAACCTTATTATACGAATAACAAACACAA ATCCTATAATTTGTAAAGTCGGTTTTGTTTAAGATCGATATTGATATCGA TGATTGATCATTGAACCCgaattattttcttgttttagaTATCGAAAAAC GTTGCGTTCTTTTATCATATCTTAAGAAAGAAAGATGCGAGGAAGAACTG AACATACTGAAGTCCGAAATGAGGAAGTATCTAAGATATTACGGCAACAA GTGTATTGATTTGGAGAAGGAGATTGACAAACTCGAAGGCTCAGAGGTAA TCTCGCCAAAATTTGGTCAATTGCACATAACCCTCTTAATTTGTTACAAT GGGTTTTCAAAAAGcgaatatatatatattaacTGACTTTATTGCTCATT TTTAAACTCATTTGATGGTGTAAAGTTTTAATATGGGAAGATCACCGctt taaaaagataattttttttcgataagggggtgaaaatgattttaatcaGG AGTTCAGACAGACCTCTTTGTTTACTATGCTATAGACGTTAATGGTTACA ACCGGAACGagtatttaaaaaacttttacggCGACTTGTCTCAAGGTTCT TAGTCCCACCAGGAACAATGGGGGAGGGCATTATACCggataaagtttta ttttttaaatatattctgCTATGTTGTATCACATAAACTATTTCATATTC AAtgtaattgaaaattttgtccatttttcagtttttaggGAAGCTGATCC TTATCCGAGACGGTTATCTTTTCGCTCAGAAAATGCTTCGGCAGGGTCTG GTTTTATTTAAAGATTTCATCTCTGACGCTAATGTCGAAGAAGACGAAGA TGATGAATTTGACGAAAATAACGTCCCAGAAATGATCTTGAACgataatg aagaagaagatgatgatgttgatgaaaattttgaggaGATGGATAAAGAA GCAGTCGAAGTGATAGGGAGAGAGCTTATCAACGGCAGTCCTTATCACTT GGACGTCAATGTAATAAAACTTCCTTATCACCTTAGCCAAGGAAGTTTGA ATGGTCGGAATGGTAGTTCGGCATGTACCACTATTTCTGTACTGGTTAGC TATTTCATGCCCACGCTGTTGTCACATTGGTGCTCAACAGAGATTGTGGA ATGTTTTGTTGGTTGCATGGAAATGGGTAATGTCTTTCATGACACCCGCC TGGAAACAGCCGTCGACGAAAGTCTTGCCCTGCTCCCTGCTGAAATCAAA GCTTCTCTCTCCCTTTCAGAGCTCGATAATACGTCTTTTTGTGAACTGTA CAATAAAATAAAGGACAAATCAGGAGAACGTATCATTATCACTGGCAAGG GGAAGTCCTTTTGTTGTATCCCACAACCggattttattgttgtttttgat TCCCATCTACATGGTAACTTTGGAGCTACAGTAGCGCGTGTAAACCAACA AGATGACTTCGCGTCTTGGACCTTTTTAAACGATGATATAATGAGTATTT ATTACCTTTCACGCACTTAGTATTATATTTGTTTTCAGTTTGCTGTCTGT TACAGCTTCCTCTTCTCAGTTTTTATGAAACACTCAGACAAGTCTCATAA GTTTTCTTAAACATGAAACTCGAGTGATTGAAATTTTGATAGATTAACCT AATATTTGAACTCGTATAGAACTGTATTCATTTAAAACGTTCCTAGAGGT TGTACGAATttctagaatattttttgaaacacAATATTAGTAGACAATAT CTCCATTCTGGATAAAATTTGTCTTTTCatttaccttattggaactaatt ttcgcgggttttaattttagcgtttttcgcggtttttcgtcaaaatcgcg aaaatttgaacccgcgaaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013452TCONS_00013452Clytia hemisphaericatranscript
TCONS_00013453TCONS_00013453Clytia hemisphaericatranscript
TCONS_00013454TCONS_00013454Clytia hemisphaericatranscript
TCONS_00013455TCONS_00013455Clytia hemisphaericatranscript
TCONS_00013456TCONS_00013456Clytia hemisphaericatranscript
TCONS_00013457TCONS_00013457Clytia hemisphaericatranscript
TCONS_00013458TCONS_00013458Clytia hemisphaericatranscript
TCONS_00013459TCONS_00013459Clytia hemisphaericatranscript
TCONS_00013460TCONS_00013460Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013452-proteinTCONS_00013452-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:22580..33101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.22 0.18 0.26 13.99 15.47 11.44 18.4 21.51 16.12 22.82 28.21 16.03 17.96 3 4.23 2.34 3.4 4.59 2.66 4 3.67 0.61 2.41 5.56 20.92 1.03 1.13 1.08 0.88