XLOC_007414 (gene) - C. hemisphaerica

Overview
NameXLOC_007414
Unique NameXLOC_007414
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000164:61777..66348+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007414 ID=XLOC_007414|Name=XLOC_007414|organism=Clytia hemisphaerica|type=gene|length=4572bp|location=Sequence derived from alignment at sc0000164:61777..66348+ (Clytia hemisphaerica)
AGGTAGACAGGCAACCACCGATAGTTTGGTGCGTAAAACAACTACTACAA CTAGATCATCCGATCAAACGACATCCGGCGATATAGGGACGACCAACCGA ACGACATCTGGCGATATGATGACGAATCGCACAACAGAGGGAACATTAGG TTAGTATATGCATTTGCTTCATATGTCTGCTTTGGGAATACTGCTTTTGT ATGTAATAGAAAAGGTTTTATtgtgattattttcaatggttTTACAAAAT CAGCCATACAACTGCTATATGTGTGAAGAAATTCATGAACAATTTCTGtg caactatcttctttcaggagattgggtggcagagcagtaTATGCATTTCG CCCTGTACCCTGGCTAGGGAGATCTAATTGCCTAGCATCTCATGCCATAA AACTAATTGTGACGCAAACTGAAAGATGTTATAGATCGGCTTTAAGACTT AGCCACTAACAGAATGGACTAGAGAACTACTCTACTTTTAAAGTCTCTTG TTAAGTATACACATGACCGTACAAACCCTCACGCTGAGAATTCTTCAACT GTCCTTCCTTTCTCAGGCAACACAACAGACGAAATGGGCGGAAGTGGCAA CACAACAGACGAAACGGGCGGAAGTGGCAACACAACAGACGCCACGGGCG GAAGTGGCAACACAACAGACGCCACGGGCGGAAGTGGCAACACAACAGAC GACATGGGCGGAAATGGCGGCACAACAGACGCCACGGGCGGAAGTGGCAA CACAACAGACGCCACGGGCGGAAGTGGCAACACAACAGACGACATGGGCG GAAATGGCGGCACAACAGACGCCACGGGCGGAAGTGGCAACACAACAGAC GCCACGGGCGGAAGTGGCAACACAACAGACGACATGGGCGGAAATGGCGG TACAACAGACGACACGGGTGGAATTGGCGACATAACGCCAATCGATGATC GAACAGAAAACGAAATACTAGCCGATAGGTTTTGTGAATTCAGAGATGAA GGTCTTTTCGCTTACACTGTAAATTGTCAAGCGTACGTCGAATGTGTGGG AGAAGAGACTAGACGCAGAGCTATCTTCAAAGCATGTGACAGAGGACAAC ACTTTCATCCAGATATATTGAATTGTGTTCCAGCCAATCAATTCACTTGT TTCAACGCTTTACAAAAGAACCCGCCTGAAGGTAAACGTCCATAGAATTA AAGgcctacatacactacacaatatattgttgtcaggcaatatattgata atatattgctgagtgccggcaatatattgaaaagtcaatatattgtcagc tcgatttgcaatattccaacaatatagggggattgtttacagaaagaaac tTTCTTTTCATAATAGAGTACCTGttatttacttcgtacattacggtccg aaaacgatattgtcaaatattgttcgtcaatattttgtgtagtctaagta gcccttaaatTACAGTAGGATTTCCattgaataagggagcgtatcgaaaa gTAGAGTGtcttttatgagagtttcttattgacggtgactttcaatatta tcgaataatggagcgcatcgaatagtagaacgtcgaattagagagcgtcg actGTAACTGTCAACTCTGGTAAATGTACCATTAAAATGAATCCATTTGC ACCAAGTTCAAAGCAAGTTCGCAACGTAGAATAATTGATTTAATCATCTT GAAAAAACCGTTGTAGAGACAAAGTTATATAGTTTCCAATTAACAGTGGT CAAAGTAGAGATTCTCCTGACAGACAGGGGTTTAATAACACTCCAACATT GGCCAGATTCTTCAAATTTGGCTGGTTTTTACATAACTTGAGACGAAATT CGCTTTTTTAAACTTCTGTGAGACGGAACTTTTTGAACACTGAATTAAAC CTTCATTGTAGggcatattcatgatatgcaacactggagagtcttctgag attttttaaaaagttcaacccaatacgtcacttaaaaaatagaaaaagtg atGTATTGTGtggaactttttaaaaattttttgaagactctccagtgttg cataatatcatgaattagcCAGATGTACAGTAACTGATGAATCACTTTTT TCGTTTAGATCCCTACCTACCACCAGGCGTGAGTCCATTTCCAAGACCTG AGGTGTGTAATGCTACTTTCAATGATGGCAATATCGCAGATCCTGAGTCG TGCTCAAGGTAAGGTTTGTTCTcatgtactctcgggtacctaatagccgN NNNNNNatatattgctgagtgccggcaatatattgaaaagtcaatatatt gtcagctcgatttgcaatattccaacaatatagggggattgtttacagaa agaaactTTCTTTTCATAATAGAGTACCTGttatttacttcgtacattac ggtccgaaaacgaTATTGTCATATATTGtttgtcaatatattgtgtagtg taagTAGCCCTTAAGATACAGTTGGATTTCCattgaataagggagcgtat cgaatagtagagtgtctttatgagagtttcttgttgacggtgactttcaa tattatcgaataatggagcgcatcgaatagtagaacgtcgaattagagag cgtcgactGTAACTGTCAACTCTGGTAAATGTACCATTAAAATGAATCCA ATGGCACCAAGTTCAAAGCAAGTTCGCAACGTAGAATAATTGATTTAATC ATCTTGAAAAAACCGTTGTAGAGACAAAGTTATATAGTTTTCGATTAACA GTGGTCAAAGCAGAGATTCTCCTGTCAGACAGGGGTTTAATAACACTCCA ACCTCAGCCAGATTCTTCAAATTTGGCTGGTTTTTACATAACTTGAGACG AAATTCGCTTTTTTAAACTTCTGTGAGACGGAACTTTTTGAACACTGAAT TAAACCTTCATTGTAGggcatattcatgatatgcaacactggagagtctt ctgagattttttaaaaagttcaacccaatacgtcacttaaaaaatagaaa aagtgatGTATTGTGtggaactttttaaaaattttttgaagactctccag tgttgcataatatcatgaattagcCAGATGTACAGTAACTGATGAATCAC TTTTTTCGTTTAGATCCCTACCTACCACCAGGCGTGAGTCCATTTCCAAG ACCTGAGGTGTGTAATGCTACTTTCAATGATGGCAATATCGCAGATCCTG AGTCGTGCTCAAGGTAAGGTTTGTTCTcatgtactctcgggtacctaata gccgggggggggggggcgctaattaaattttccacccaggacattcttat tccagccCACTCcttcttattgatttttgggaaatttattTCGAAAGTTC CCTcctttgccctaattctgctgtattagcctccttttcgaaaattttcc atccagggcatttttattccaatcttcccgcttattaatttttgagattt tttccaacccccctgcttattccaaatctcccggctattaggtacccgag agtataggGAGCACTCTTTAATGTCACACTCAAATATACATTCCAGAAAA AACCGTACACcactgttgaggaggtccatttccattttcgtttccaaggg ggtaaggtgtgatatgtggcggaattccatagggagatacgaaaatctgt caaaaataactggaattccatagggGTAGCTTTtaaaatcctactaaaat tcagaattccagagggttttgagcctgaaattgtctggaattccagaggg ttacagcatttccagccacagagggatggacctcctTAACAAGGGGTAta cagtttttttctggaaaagtccaataTACATTCCAGAGGACAAACCTTGG TAAAATAATCGTCACTGGTGAATTAAAATATCCCTGTTAGCTTCGTCATC CTATTTGCGGTTAGTCTTTGCCAAACTCTtcttcttcgccgaaaatataA CGCGAAATTCCAAACTATAAATACTGTATTGCTGATGGGGAATAACGGAA GTTTAAATAAAACTGGCAAGAATTAGGCTTCTGGTATTCTCCCCTCCTTA TACTATCTGCAGTTCTGTGAGAAAATTATTAAGACTAGAATTAACTCTCC TTGATTTTCCTTAAAGGTATTACACTTGTACGAGTGGACTTACAATCGGC CCCAGACCGTGCTCTACGTCTTTATACTTCAACCCAAGGATAGGTAATTG TGATTGGCCGAAAAACGGTAACACTGAAAATTGTCGTGGAGCGACTATAA GAACGACGACCACTACAACTCGGCGAACGACTATGAAAGATGATTCAACG ACGATGAAACTAAATACGACTACTACAACTCGGCGAACGACAACTACAAC TCGGCGAACGACACTACAAACTCGGGAAACAACAACTTCAACGAAGGCAA AAACTGTACCGACAGATATAATTTTCGCATAAACTTAAGGAACACCGAGA ACAGATTGAAAACTTGACTTTCGGCCAagttaatttgaaaaaagatcaGA AAATTGTTTTTAGACAGATAGATAATTTATCAATGTAATTTACccttaac ttttttaaataatcattttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013273TCONS_00013273Clytia hemisphaericatranscript
TCONS_00013274TCONS_00013274Clytia hemisphaericatranscript
TCONS_00013275TCONS_00013275Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013275-proteinTCONS_00013275-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000164supercontigsc0000164:61777..66348 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0 0 0.04 6.37 3.61 0.74 1.54 0.48 2.53 2.1 0.34 1.15 2.6 31.37 10.47 1.32 0.71 0.1 1.42 0.12 0.05 0 0.07 0.07 0.12 0.09 0 0.04 0.04