XLOC_006929 (gene) - C. hemisphaerica

Overview
NameXLOC_006929
Unique NameXLOC_006929
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000143:563908..570960-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006929 ID=XLOC_006929|Name=XLOC_006929|organism=Clytia hemisphaerica|type=gene|length=7053bp|location=Sequence derived from alignment at sc0000143:563908..570960- (Clytia hemisphaerica)
AACGCATCGCATCTGTCTTTCACTTTCGTTCTTTGATGGAATTTTCTGGA AGTGTCTGATCGACCAATCAGGTAGCAGGAATTCGCCCTCGACCAATCAG GTCGTAGAGAACATTCTAGAGCTCGCTAAGCGTGGTAAAGTCATAAATAT TCGCATGTGGTCTTTCACAACAGAACAGAGTCACAAACGGGTGTTCATCT TGCATTAGTACAATTTTAGTACCATATTTTGCAAAGTTTATTGACAAATC ATGGGTGAAAACGAAGAAGTCGAAACTTTTGCCTTCCAGGCTGAAATTGC TCAACTTATGAGCTTGATTATCAACACTTTCTACTCAAACAAAGAGATTT TCCTTCGTGAATTGATCTCCAACTCTTCTGACGTAAGTATCATTTTGCAC TGTTTGAAAATTTGAATCTCCTGGTCTCGACTTGATAAAACTTACATGGA TGATGAACAAATCAAAGGCTTAATATATGATCATCGTGATTTAGTCTATT GATTATCTGACGTGGTGTTTTATCTGGTACCAATATTTTTGCCAAGATTC CACATCCCACCCCTAGTTTTTCTGGTCTGGGTGGCTGGCTGGATATTACA AAGGGTTTCTTCTAGAGTTATACCGTGAGATTGGGTAACTTGCATCAGTG GAGGCTAACATGCATAGCCTTCAAATGAAAGACCTGGCTGGTCATTAAAA TACGGTTGGCAAACGATATCATACTCCAGGATGCATCGTCTCTTATTTTC CTCCTATTTTCTACTTTCCTATCATCTATCCTGATTCTATCTTTCTCAAG TGTTTCTAACTGTTTTCTAAGTATTCTGAAATTTGCCCTTACCGGTGAAA CAGGTCACCGACCCCAGCTCGAACCACCAAATGCAAGCAACCTTGGTTTA CAAACCCAACTTCTAACCGCTTGCGTCAACAAGACACGACAGAAAACTGT CATTCACAAATACTTATAGCGTGTAATTTACAGACCTTATTAAGAAAGCT CCCAACCCTACTGGTGCCCCTACAAGGAACTCTACGGGATCCAAAGTTAA GTCACAGGGTACGAATGCCCCTAAGAAGGCATTCGGCCTTATATTGTGAC TCTCGAGCTCCAACCCTAACCCTAACTGATAATAACCGAACCCCCGTCTG CGTCCGTGGATTGAAAAATTTCACTTGCATCCTGGAGTATGATATCGTTT GCCAACCTTAAAATACAAAGTCATTTTGCACTGTTTGAAAATTTGAACCT TCCTGGTCTCGACTTGATAAAACTTACATGGGTGATGCACAAATCAAAGG CTTAATATATGATCATCGTGATTTAGTCTATTGATCATCTGACATTGTGT TTATCTGGTACCAATATTTTTACCAAGAATTCACATCCCATCCCTAGTTT TTCTGGGCTGGGTGGCTGGCTGAATATTACAAAGGGTTTCTTCTAGAGTT ATACCATGAGATTGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCC CTCAAATGAAAGACCTGGCTGGTCATTTTAAAATACAAAGTTAAATCAAA ACAAAAATGGTAGACTTAGAGCTGCGAGCGGAACTGAGAAGTTGTATTTT AATGACCAGCCAGGTCTTTTATTTGAGGGCTATCAGGCTATGCATGTTAG CCTCCACTGATGCAAGTTACCCAATTTCACGGTAATCAAGAAACTAGCTC ATTTCTCAACTATTTTAAAAAGTCCTTTTTTTCAGTAGAAAGTGTCAGCA GAATAGTAAACTTATTTTAGTCAAATGAAGACAATGCTAGGGACATAATC TAATCAGTGTTCCTTAGAAAGAAGTCTGTCCAGTTGAGATCCGTATGGTG GCGGAAAAGGGTTTAAAAAATATTAGACATTTGAAAAATATTTGCATGAA AAAAGATATTGAACTATGAAACCAGACTCCCTGCGCCCCAGTATGGATTC CACGAAATCTCGCGCCGAAGATATTTTTCCTTACAGCAAGCCTCACGCCA AGCAAAATTTCTTTTGTACCAACATTCAATTTTTCAATAAGGGTGCAAGA TGGGAAAAGAGGCGCATGCGCCAACATGATTAATNNNNNNNNNNNNNNGC TGGAATTATTACTTTACGCCAACTGAAAATCAAACAATCTTTGTAAGTAC CCTTACGCCAATGCGCCAAAAACGTTTTAGTTGTACGCCGAAGATCTTCG GCCTTCGGCGTTAGTTACACAAAATCCATACTGGCCTGCGCCTACTCGAT ACATTCAATATCTTTCATTAATCAATTACCAAGACTGAATATCGTGAGCC TGTCAAACCATGTCACAAAAAATTTATTATAGAAAAGGTTTTTTTATCCA GTTTTATCATCACTTTTTACACGGATGTAGTCTTTATGGCGAAAATTTTG ATGACCCCCTTCAGATTCACCACTAAGGGACATAGTAAGGGTTCACCCAT TAACAAGTTCAGTCTCTCATTAGTCTTCAATTTGTGCTATTGAACTATCA GAAAACATTGGGATCCAGTATGGATTCCACGAAATCTCGCGCCAAAGATT AGTCCCTTTTCAGCTACCATAGCTTGTCACTAAGGGTTAGGTCTTTGCAA TTAAACCTTAGGAGGAAAATTTCTGATTGTTGCTCTCTAGATCCAGACNC TTCGGCGTTAGTTACACAAAATCCATACTGGCCTGCGCCTACTCGATACA TTCAATATCTTTCATTAATCAATTACCAAGACTGAATATCGTGAGCCTGT CAAACCATGTCACAAAAAATTTATTATAGAAAAGGTTTTTTTATCCAGTT TTATCATCACTTTTTACACGGATGTAGTCTTTATGGCGAAAATTTTGATG ACCCCCTTCAGATTCACCACTAAGGGACATAGTAAGGGTTCACCCATTAA CAAGTTCAGTCTCTCATTAGTCTTCAATTTGTGCTATTGAACTATCAGAA AACATTGGGATCCAGTATGGATTCCACAAAATCTCGCGCCAAAGATGTTT TTCCGTACAGCAAGCCTCACGCCAAGCAAAATTTATTTTGTACCAACATT CAATTTTTCAATAAGGGTGCAAGATGGGAAAAGAGGCGTTGCGCCAACAT ATTATTAAATTGACGTGAGCGTAAGCGAGTAAAAGCAAATTTAACCAAAT GAAAGCTGAAAATCAAGCAATCTTTGTAAGTACCCTTACGCCAATGCGCC AAAAACGTTTCAGTTGTACGCCGAAGATCTTTGGCGATAGTTACATGAAA TCCATACTGGATTGGGATATCGATTCTTTTTCGGGGGAATGTTATTATTT TTAGGTATCACTTTTTTTAGTCCCTTTTCAGCTACCATAGCTTGTCACTA AGGGTTAGGTCTTTGCAATTAAACCTTAGGAGGAAAATTTCTGATTGTTG CTCTCTAGATCCAGATTCCCACTCCATAAAATCAACAACTTAGCAGAATA AGCTGGATCACCTATTGACAAATAAAATTGATTTCCAATCGTTTATGGAT TTATCATAGATTCAAAAAAGTTGTCCATAATATTGAGAGGGAAAATCTTG CTAGTTTCGCCCAAGGTGTTTGCAACACTGCATTTGTATAAATTTACAAA GTTGCATCCTCAGGGCTTGAAATAACGGTCTGTATATTCCTAAAATTGGA GTATTAACCATGACTAAAGTTTACAAAATAAGAAAGTTAACCATGATTTG AAACCTCAAAGACTCTATGCAGTTACTGAAAATCACATTCTTTTGTCTTA CTTCAGGCTTTGGATAAAATCAGGTACCAATCTTTGACTGACCCAACTGT ACTTGAATCTGGACAAGAACTCAAAATCGATATTGTTCCAAACAAAGATG AAAAGACTATCACCATTCATGATACTGGAATCGGTATGACCAAAGCTGAT CTTGTTAATAACCTTGGTACCATTGCAAAATCTGGAACAAAAGCTTTCAT GGAAGCCCTTCAAGCTGGAGCTGACATTTCTATGATTGGTCAATTTGGTG TCGGTTTCTACTCTGCTTATTTGGTTGCTGAACGTGTCGAAGTCATCACC AAACACAATGATGACGAACAATACATCTGGACTTCGTCTGCTGGAGGCTC TTTCACTGTCCAAACTGATACCATCAATGAACCTATTGGGCGTGGTACTA AAATCATCATGTACATGAAAGAAGATCAACTTGACTTCTCTGAAGAAAAG AAAATCCAAGACATCATTAAGAAACACAGTCAATTTATTGGTTACCCAAT TGCCCTTCAAATGCAAAAGACAAGAGACAAAGAAGTGAGTATCACACAAA CTTTTCCTTAAAATCAACACCTCAACATCCCAAAAGATTGTTTACGTCTT CCAAGACCAAATACTAGACCCGCAAAAACCTTCTTTGGATCTGAGTAAAA CCTCCCTAGTGCTTTGTTTTTCAAATTATTTTAATTATTTTCCAAAACAT CCAGAGCTTCAAAATGTGATTGGTATTTACTTTCATTCTGATATGCTAGT GAAAAAGAGCAAGCTTAATTTTGGTTTAATTAATTATCAATTATCAGTAT ATGTATTGAACAAATTATTTTTAATTTTCAGGTCAGTGATGATGAAGCTG AAGATGAAACTAAGGAAGAAGACAAGAAGGAGAAAGACAACGAAGATGAA GGCAAAGAAGACGAAGGACCAAAGATTGAAGATGTAGAGGATGAAGACAA AAAAGATGAGAAAAAGAAAAAGACTATCAAGGTATTGTTTATTCCATCAC TCTTCATCGCTAACAAGTATAAATACAAAGATTGGTTGATGAATTTAAAT CAAAGGCTTAATATATGAGAAACATGATTTAAGCTAATTGAATTTCTGAC ATGACACATCCATCAAACAGAGGTTCGAAAATGTATTAAAAGATGTTTGA AAATGTATTAAATATTATTATTCTTAGGAAACCTACTATGAAATGGAGCA ACTCAACAAAACTAAACCCTTGTGGACACGTAATCCAGATGACATTAGCT CAGAAGAATATGCTGAATTCTACAAGAGCTTGACCAATGACTGGGAAGAA CATTTGGCTGTCAAACATTTTTCTGTTGAAGGTCAACTTGAATTCAGAGC TATCCTCTTTGTTCCAAAACGTGCACCTTTTGACCTCTTCGAAAACAAGA AGCAGAAGAATTCAATCAAATTATATGTCAGACGGGTTTTCATCATGGAG AATTGTGAAGAAATCATGCCTGAATGGTTAAACTTTGTCAAGGGTAAGAA GTATTTTAAAATCAAAGCCTTGCATCTTATCCATATGCAACTATCATCAG TCATGTAGACTAAAGCTTAAACCAGAAATACCAAAATGTCTGGATTACAG TTCTACAGGATGGTAAGCATTAAAATTAAACAATTCTTGTTTCAATTCAC AGGTGTTGTTGATTCTGAAGATCTCCCATTAAACATCTCAAGAGAAATGC TTCAACAAAGTAAAATCTTGAAGGTTATCCGTAAAAACTTGGTCAAGAAA TGCTTGGAATTATTTGCAGAAATCGCTGAGGATAAGGACAACTACAAGAA ATTTTATGAACAATTCAGTAAGAACGTCAAATTAGGTATCCACGAAGATA CAACCAACCGTGCCAAAGTTGCTGAACTCTTACGATACTCATCTTCATCA TCTGGTGATGAGAAAACTTCGTTCAAGGAATACGTCTCTCGAATGAAAGA AAACCAAAAGGACATTTATTACATTACTGGTGAAAGCAAAGAAATTGTTT CCTCTTCTGCTTTCTTGGAACGTGTTGTGAAAAAAGGATTTGAAGTTTTA TACCTTGTTGATCCTATTGATGAATACGCCGTCCAACAATTGAAAGAATA CGATGGAAAGAAACTTGTCAGTGTCACCAAAGAGGGTCTTGAACTTCCTG AAGACGAAGAAGCTAAGAAGAAGCACGAAGAATTGAAAGCTTCATTCGAA GAATTGTGCAAGGTTAGTATTCATACCTTCTAAAGCTATTTCAACACGAT TAAACTGGCTAACAATAATTTGNCTTGAACTTCCTGAAGACGAAGAAGCT AAGAAGAAGCACGAAGAATTGAAAGCTTCATTCGAAGAATTGTGCAAGGT TAGTATTCATACCTTGTAAAGCTATTTCAACACGATTAAACTGGCTAACA ATAATTTGCTTAAAATTACTCTGGGAATTATAACTATATTTCTTTATCTT GTATTGAAAATGAAATGTTTTGGCTATGGTTTGGCGCTGAACTTGTTCTT TTGGCAATGTTTCAAAAAGACTTCAGACAAAATGGGAATGTGGTTTCAAG TTTTCAACCTGTTTGATTTTCCCACTTTCAGGTTATCAAAGAAGTCTTGG ACAAGAAAGTCGAAAAAGTTGCAGTTTCCAACCGTCTCGTCGATTCTCCA TGCTGTATCGTTACCAGTACCTATGGATGGTCTGCAAACATGGAACGTAT CATGAAAGCACAAGCTCTCCGTGACACCAGTACCATGGGATACATGGCTG CCAAAAAACATTTAGAAATCAACGCTGAACATCAAATCATGATTGCATTG AAAGCTAAAGTTGACGCCGACAAGAATGACAAATCCATTAAAGATTTGAT CGTCCTCTTATACGAAACTGCTCTTTTGTCATCCGGATTCTCTTTGGAAG AACCAAAAAACCATGCTTCTCGCATCCACAGAATGATCAAACTCGGTCTT GGAGTTGATGATGAACCAGGTGAGATTTGCTTCTTAAAATTGAATTTTGC TGATAGTACTTCATAAAAGTGAACAATAACCAGGGGGGGGGCACGCAGTT ACTACAAGACATGATGTGTAGTAAGTGCTTCTTCAACACTTTTTTTCAGG ACCACCACCCTTTGCATTTACTACACCTTGGTAGTAACTGTTTTCAGAAA AGATTTCCAGGTACCACCCCTGNNNNNNNNNNNNNNNNTTTCAGGACCAC CACCCTTTGCAGTTACTACACCTTGGTAGTAACTGTTTTCAGAAAAGATT TCCAGGTACCACCCCTGTTTTTGAGTGATCATCAAAAACATGCTCGAAAT TAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012321TCONS_00012321Clytia hemisphaericatranscript
TCONS_00012320TCONS_00012320Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012321-proteinTCONS_00012321-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:563908..570960 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HSP90AA1heat shock protein HSP 90-alpha isoform 1 Homo Sapiens
HSP90AB1heat shock protein HSP 90-beta isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2814.93 2839.25 2015.21 1788 475.9 370.62 438.33 475.89 1083.18 761.71 1676.63 1641.71 3648.18 3286.26 2955.8 2274.88 1717.65 2383.34 1532.23 2146.39 1980.81 2151.55 2913.68 3000.78 2213.77 2436.16 2859.62 4414.71 2178.96 2227.04