XLOC_006850 (gene) - C. hemisphaerica

Overview
NameXLOC_006850
Unique NameXLOC_006850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000141:289553..298716+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006850 ID=XLOC_006850|Name=XLOC_006850|organism=Clytia hemisphaerica|type=gene|length=9164bp|location=Sequence derived from alignment at sc0000141:289553..298716+ (Clytia hemisphaerica)
GCTAGGATAAAGTAGAATGCGTAATGTTTTCGACAAATTAAATTCCCcct aaattttacgaaattgatccatccccaaattaaatccacgccaaaattaa tccacttaaggtaaaatgcttcattttgttaaaaataaacTACCTGGAGA CATTCATTCTATGGCATAAAGTAGGTCCTTATCGTAATATCCTGTgttaa aattcaaatatttctgTTTACCCTCTTACATTACAACGTACACTAATGTT ACAAAAGGAAatttacaatacaatacaatcacgtttttctttttctcgaa GATGCTCGGGAAGTCCACCCAATCGATTTATACAAAACTCGATATCTCGA TCAATATCGATCTCAACCCCATTTAATTTCAATGTTTCAgcattcatttt cttttgaattttttttacgaCAAAAAGAATAGTCAAAGCTTGTTCATGTT CTTGACGTAATTTCAAATGCTTCACCATGAATAATGCCTCTCTTAAATCA TTTGGATGATACTGTCTCTTTAGCTTTTTGAAgagctttttcgaatgttt tgaggcttctttgaaatcattttcacgAATGAAACAACAAATATAAAGTA TTCTGCTTCGGAATTTCGTTCTCGTTGGATTAAGATGGTTGCTCAGATAA TTTATACTTGGACCAATAGAATGCAAGAATCGCTCTTTAACGAAATCAAT AGTTTCAACTTCGTTCAGAatcaacattttacaaaaactGTCGAGATATG TAAAGTAAGGTGTCCCTGGTGCAGATTGACGGAATCTCTGGTAAATCTCT CCACATTCTTCGTATGCTCCTGTATCGAAAAGAGCACGACCGACTTCAGA TAAAGTGATGTCTTCTTCATATGATTCTTGATCAGTCAAAGCGTTGAAAA TCTTTAAACCTTTCTCCCTCATTCCATTCAGTATCAATAAACACGCAATC AACGTTTTACAAGTATACGTTATATATTTCAAGTCTGAATATTTCTTTAT CAACTGTAATCCAGCATCGTAGTTTCCGAGTTCTTTATAAGAAAGAGCAA GCTTGAATGTTTCATCAAAATTCAACGTTTGTTGCGATTGTAATCGACTT TGATGCTCTTCAAAATCACCATCAAAAAGGATAGCTGCAGAGTAACGGTA ATCAATACCTTCTAAATCTTCCTGAATATTCTGgattagtttttcttttt caggagATTCCTCTACAACATTCGTCTTTACTTCCTTCAACAGTTTTTTC AGACGATCATCCATACAATATTTTATCCAGTAGACAGTGATGTCAGTTTT GTGGTGTGATCGTACCTCATAACTTTCTTTAACGAGGTGTTCCCTTAAAT TTCCGTATCCTGTTCTACTGAGGTACACGTAAATATCCCGAATTCTGTTA TCAATGATATCGATGaaaattgttttatattttggtTCCTTCCAAAGATG ATAGAGGTGAGGAGCCCAAAGAACTGCGAGCTTATTGCTATCTTCGTCAT CAATGCAATCAACAATCGTTTCATAAAACTTTTTGATCGCTTCAAATTCC ATGTTCTTTTCGAAAAGATAATGTTGGATTGATTTTTGGTAAAGGGAATG CACCGTCCAAAATTTTTCAGGTGCTGCATGCGTCAATTCTTGAAACCTTT GATTGCATTTGATCATGGAATAATCTAACAAAAGTTTTTTGGCTTTCGTA TATTCAAGTTTGTTCTCAAAGCAATGTTCAAGGAAAAGTTCGTCGATAAA ACTACCATCAAATAATCCGATTAAATATAGGAAAGACATTATCGAATGGT CGTTAGATTGTTCGATTCTTTTGATGGTGAtttgaaaagatgaaaaaacg GACGATCGAACTCCATAATGGGTGACAGCTTGTTGTGATAAAGTATCGAG CTTGTAATCTTGAAGAAGCTGGAGGTAGTCTTTCAAAGAGGTTTGTGATT GTTTGACGTACGCTACTACATGACTAATAGCTAATGGATGGAAATCTAAT TCTTCAATCAAATCTTTAAATAAATGTTTCTCATCCTTCAGATTGTTCTC GACGAATTTGTAAGCAGTTTGTTCAGGCCATGTTTCCATTTTTAAATGTT CGTAATTGTTGGTCCAATTACCAAGCTGTGTGGTGATGATGGTTTTTTGA CCAAGTTGTAAAACATCTGATAACTGGTTGATATCAGTGCAGTTATCAAA GACAAAAAGTGTCTCCTCGTTTTTGAAATAGTCATGAAGCATGTGTGAAA TATCCTTGGTATTCGATTTTCCTGGGAAACCGAGAATTTGAGCTATATTG GTGTAAGTTGTGTCAATAGATTCAGCATTAACCCACAAAATGGTATTATA TCTGGCAGCATAATCAGTGATATACTTCCTTGCTAATTCTGATTTTCCGA GACCTGGAATCCCTGAAATAACCGTGGCTAGTTTATTTCCGGTAACGAGA GATTGGTGAATTGTGTTCAATTCATTTTCACGACCAACGAAGTTTGGGTT TTCGATTGGAAGCTGATAAATAAAAGTTGGTGACAGAGGCTTCAAATCTT GTGGAGGACATCCTAGGGCGATTAAAGGTTTACTCATACGATTGTAGATT CTCTTATATTCTGCTTTGGTAATCTGTCGGTTTGCTTTATGGTTAAGTTG GTTGCGTTCAATCTTTAGAATGATACAATATGCGATGTCTGAAGTATCGG TAGGGTCTGGTTCCGCATCCCAACCTGTCCGTGGTTTTTGATATCCGCAT AAAGTACGGATCATAAAGAACGTTAAAGTGACGTCGAAAAGTGAGGAGTC GGTTCTCTGACATGCTGTATAAATCAAATCGTATTGATCTTGTTTCAAAA TCCGTTGATTAAGAAGTTGTTTCAATTTCCTTTGGTGTGGTAACAAAGCA TTGTATAAATCAACTGGATTGCGTGGAAAATGTTTGTGAAAAACATCGAG GAGGTATTGTTGAGATTTTTCTTCGAGAATATCAACATTATGACGATTCT TGTGTTCTTGTGTGAAATATTTGACTGGTGAAGTTTGTGTTCCTGATGCG GCTGTTGCCATTTCCTAACGTTCGCTACTTcatgaaaaattttctctatc ACTAACTTCAAAATGTCACTGTTAGATGATACCAATATTTATCTTATGTc attgtgtttgtttttgtaatcAGATCTGTTCAAAGTTCAATTAAATAACA CATCACAACAAAATATTACACACtctttttctttaagaacattttataaa CATTGTTTAGCCTGAAACGGCTTAATTGTAAATGGTTGAATTTGATGTCC TTTCGGTTCACAGAAACTTaagttttcatttcattttcgttttaatTGTA ACGTTTCCTTACTAAAAGTCAAAACTAATAACTTAAATACAGTTTAACCT CCAATTAGTGGACACCATCGGGAAATAAGGTTACTGTCCGCttattagaa gtgtccgccttttagaaactttttgattttgtgctCTAATTTCAGTATAA GGTACAGGGGTTcagtaaataaaattttggaCCGAAATGCTTTTCTAGAG ACACTTGAAAGGACAAGATGATGATTATTCAAATGCAACGATTTAGAATT AATGAGTCATAGTAGTCTTGAGGTCCCTGTAAATTCTATGACGTAAGCAA ATTCACCGACTGGATGAAAGGAAGTGCTCCAAACGTCTTTAAGCAACTCC TTCAACGTAACTTTGAAGTGAAATAAATAGTTTTGAGAAATCAATCCTGT CtaattttttaaagtctttGACCAGTTTCACTAGTTTGACCGTTGATAAC TGCTAATTAGAGAGTAAAAACTCGGTTTTTGGCCATTTagtgcaaaaact ttgtccgcTAATGGGAGGCTCTGCTGATTGACcgccttttggaaactttt ttgaaaggATTTGACTAGTAAATGGCCGGGGAAAATAGTATTGTTCCTTA ATTTAGTCATGCTTTTGCTCGAAAACTTTAGACCTTTTTTCCTTCTCATA TTATAGGGAACAAAGATGGAGAAAACACTTTTTGGCATAAACTTTGAACC TTCCCCTCCCTTGGAAAGTCTTTCAACGAAACGGAGCATTTCAATTCcaa tgaaaatagtggagcgaaacccTTTCGATCTAATTTTGCTTTGTGACctc tttttatgtttttttgatgATTGATGATGTTTACTTCTCAAATCCTTAAA CTTGGCAACTCTCTGTTGTATTTTGCAATATCATTGTCGTCTTTTAAAGG GCGAATCAAATTACATTTTTTGATGATCGATGATTTTTACATTCCAAATC CTTAAACTTGGCAACTTTCTGTCGTATTTCGCAATATCATTGTCGTCCAA ATTCAATAAAGTACCCGTGGCTTATTTCTGCTACAAAATCGCACTAATAT TTATCATGATAGTTAACAggtcaaaaaaaatgtttgaatgcCTGAAAAGC ATGAAGCTTAACTGgtcagaaaaaaatgtttcgatATCATATTTACAGTT TTGCTAAAGTACCTGATCAAataattagcatattttagGCGTCATTTTTC ACCTGAAAATATGCTATCATCAATGTCACGATAATAACTTGTCTGTTTTC ATGATAAACTTACTTGATCAAAATTCGGATTTGTTATCAAGTCTCTCCTA ATCATTTGCATATATATcatattgaagagtaagctcTAATCCTGTCTCAT CTATTCAAAGCCACGTACCAAATACttaaaacaaccatttcgacgctctt ggagcttgattatggtTTCAATTTccatccttttgtattatcagcatgtc tctaaaactggccttcccgattttttcctactgacaagttctatatattc atactaaaggcatctcatttaGCATAATAAAATAGTCGGTGCAACAAAGC TTACAAACATCATACTTAATGttcctgtcaatattttttgtcaaattgtA TCACTTTGTCAAGATGTCAAGAAAACGACTGGTTACttcaaaagtcactt tttagtattctgaggacttaatttaaacattctctatggtggagagagca gatgaactcgataatccaaatttatctggtcgccggttgtggccgctggt cgtggtcgccatttctggtcgatgtttagaaactcccaaaTAAGAGGGCT TCATTTCCATGCATCTTAAAACTTGTAAAATATGATAGACGTAGTATAAg cctagtctacacaatagacagatccaggcttttaggccttactcttggtc tataggcactgctataggcggtcactagtgacccccaccgggaattgctt attaataggtttaaacataatacgNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNagtgcgcatgcgatttatctggagaatttcaatattcaa aacaagagcagtgctcatagcccgaagagtaggagttttacgctcgaaac gaaggaagatatgccGTAGCGTAGTATAAGCCATGAATAGAGTTTTCATT CAATTTATTACAGTTTAAAGATAATTCTATGCTGGTTCAATCTGCCGTCC TCGGAGTTTTAAATAGGGAGTTTATGTACCTTactggccctttttacacc ggccttGCTTTACCGATCCATTTAAACACAATCCCctattactcttaggt tccaaataaacggagGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggggggggt cctaataaggtcgggggggttggaaaattttcgaaaataacaCCAATAAG GGCCTgggtaaaaagggccgataaatTATACTCTTGAGGGCGGTGGACTG ACTTAAACGATTTGGCAATCGCGGATGGAAAAGTGTTGAATTACTATCAT TCTCAGACAATCAGGATCTAcacaaatcagaagctaaccgtctcTGTCAC ATAAAAGACACACACATACAAGTGGCTAGTGAGAAATCATCAATATCGGA AAGAGGTAAATCTTGTCAGTTGAAAAATGAACCCaacaatttctttttga attctTAATAATAAAAGTTAGATAAAGTTAATAAATTACAAATAAGTGTA TAAGAACAAGCTAGGATAAAGTAGAATGCGTAAAGTATTTAGAAGTGATA ATATTTTGTACTTTTCTCAGAAAGTGTATGGTGTGAATGGtgaattttaa caaaattcgccaaatcaaCTCcccacaaaaatttcaaaaactgatcactc gccaaattaaatccccgctaaattttacgaaattgattcatcgccaaatt aaatccgcATTGTAATGTCCTgtgttaaaattaaaatatttctgtCTAAC CCTTAATTCACCAAGTCCACTAATGTTACGAAAGTAAAatttacaataca atacaatcaCGTGTTTCTTTTTCTCGAAGATGCTCGGGAAGTCCACCCAA TCGATTTATACAAAACTCGATATCTCGATCAATATCGATCTCAACCCCAT TTAATTTCAAAGTTTCagcatttattttcttttgaagttttttcacGATA AAAAGTATAGTCAAAGCTTGTTCGTGTTCTTGACGTAATTTCAAATGCTT CGCCATGAATAAAGCCTCTCTTAAATCATTTGGATGATTAGGTCTCTTTA GCTTTTTGAAGagctttttcaaatgttttgaggcttctttgaaatcattc tcACGAATGAAACAACAAATATAAAGTATTCTGCATCGGAATTCCACTCT CGTTGGATTAGAATTTTCTAATTTATACCTAGGAtcaatgaaaaacaata attgCCCTTTAATGAAATCAAtagtttcaacttttttcagaatcaacatt ttacaaaaactGTCGAGATAGGAAAAGAAAGGTAACCAAAGTGCAAATTG ATGGAATCTCTGGTAAATCTCTCCACATTTTTCGTATGCTCCTGTATCGA AAAGAGCACGACCGACTTCAGATAATGAAATTCTTTCTTCTGATGATTCT TGATCAGCATCGAAAGTCAAAGAGTCAAAAATCTCTAAACCTTCCTCCAC CATTCCATTCAGTATCAATAAACACGCAATCAACGTTTTACAAGGATACC ATACATATTTAAAGTCTGAGTATTTCTTTATCAACTGCAATCCAGCATTG TAGTTTCCAAGTTCCTTATAAGAAAGAGCAAGTGGGAATGTTTCTTCAAA ATTCAACGTTTCTTGACTTTGATGCCCTTCAAAATCGCCATCAATTAAGA TGGCTGTAATTTCACTGTAATCATTGTAATCATTGTCTTCTAAATCCTTC TGAATTTTCTGGATGAGTAATTCTTTCTCAGGAGATTCCTCTACAACATT CGTCTTCACTTCCTTCAAcagttttctcaaattttctttagtCACACGAC CAATCATACAATGTTTTATCCAGTAGACAGTGATGTCAGTTTTGTTGTGT GATCGTACCTCATAACTTTCTTTAACGATCTGTTTGCTAAAATTATCGTA TCCGGTTCTATCGAGGTCCAAGTAAATAACCCAAATTCCGCAATCAATGA TATCGATGAAAATTGTTTTATATTTCGGTTCCTTCCAAAGATGATAGAGG TGATGAGTCCAAAGAATTGCGAGTTTATTGCTATCTTCGTCATAAATGCA ATCAATCGTTTCATAAAACTTTTTGATCGCTTCAAACTCTATGTTCTTTT CAGCAAGATAATGTTGGATTGATGTTTGATAAAGGGAATGCACCGTCCAA AATNATTGATATTTGATAAAGGGAATGCACCGTCCAAAAATTTTCGGGTG CTAGATGCGTCAATTCTTGAAACCTTTGATTGCATTTGATCATGGAATAA TCTAACAAAAGTTTTTTGGCTTTCGTATATTCAAGTTTGTTCTCAAAGCA ACGTTCAAGGAAACGTTCGTCGATAAAACTACCATCGAGTATACCGAATA AATATAGGAAAGACATCATCGATTGGTCGTTAGATTGTTCGATTCTTTTG ATAGTGATTTGAAAAGATGAAAAGACGGACGATCGAACTCCATAATGAGT GACAGCTTTTTGCGATAAAGTATCGAGCTTGTAATCTCGAAGAAGCTGGA GGTAGTCTTTCAAAGAGGTTTGTGATTGTTTGACGTACGCTACTGCATGA CTAATAGCTAATGGATGGAAATCTAATTCTTCAATCAAATCTTTAAATAA ATGTTTCTCATCCTTCAGATTGTTCTCGACGAATTTGTAAGCAGTTTGTT CAGGCCATGTTTCCATTTTTAAATGTTCGTAATTGTTGGTCCAATTACCA AGCTGTGTGGTGATGATGGTTTTTTGACCAAGTTTTAAAACATCTGATAA CTGGTTGATATCAGTGCAGTTATCAAAGACAAAAAGTGTCTCCTCGTTTT TGAAATAGTCATGAAGCATGTGTGAAATATCCTTGATATTCGATTGTCCT GGGAAACTGAGAATCTGAGCTATATTGGTGTAAGTTGTCTCAATAGTTTC GGCATTTATCCACAAAATGTTATTATATCTGGCAGCATAATCAGTGACAT ATCTCCTTGCTAATTCTGATTTTCCGAGACCTGGAATCCCTGAAATAACC GTGGCTAGTTTATTTCCGGTAACGAGAGATTGGTGAATTTTGTTCAATTC ATTTTCACGACCAACGAAGTTTGGGTTTTCGATTGGAAGCTGATAAATAA ATGTTGGTGACAGAGGCTTGAGATCTTGTGGAGGACATCCTAAAGCGATT AAAGGTTTACTCATCCGATTGTAGATTCTCTTATATTCTGCTTTGGTAAT CTGTCGATTTGCTTTATGGTTAAGTTGGTTGCGTTCAATCTTTAGAATGA TACAATATGCGATGTCTGAAGTATCGGTAGGGTCTGGTTCCGAATCCCAA CCTGTCCGTGGTTTTTGATATCCACATAAAGTACGGATCATAAAGAACGt caaagtgacgtcaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012168TCONS_00012168Clytia hemisphaericatranscript
TCONS_00012169TCONS_00012169Clytia hemisphaericatranscript
TCONS_00012170TCONS_00012170Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:289553..298716 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28 0.22 0.36 0.37 0.35 0.43 2.85 1.91 1.43 2.2 2.4 0.79 3.4 3.27 3.53 4.27 2.87 3.02 6.63 7.14 5.12 4.35 1.73 4.05 3.4 5.14 12.14 8.57 3.85 3.85