XLOC_006363 (gene) - C. hemisphaerica

Overview
NameXLOC_006363
Unique NameXLOC_006363
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:269278..279863+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006363 ID=XLOC_006363|Name=XLOC_006363|organism=Clytia hemisphaerica|type=gene|length=10586bp|location=Sequence derived from alignment at sc0000127:269278..279863+ (Clytia hemisphaerica)
GCCAACAATAAAGCTTCAGGATTGAAGAATGATCTGATGAGCTGCTTGGT
GGCCTGTCTACAATCTGAAAAATATGATCAACTTCATTTGAAAGTTTTCC
TTTGCTTCTCTGAACTCGTTCACAAAAACGGTAAGTCCTACGTTCCAAAG
ACTGTTTTTTGTATTGAACTGCTTCAgtttacagttgacgctctcttatt
cgatcttAAAAGGGAAGTAGAGATTTTAATCGAgagaatgtcgaatagta
ggAAGTCTCCCTCATAATAATTATAGCCAAGGTAGAAAAATACATGCTAG
ACTTGACAGGAGTCATAATGTACATATGCTGAAATCCTAAATTCTTTGGA
GAAACGGAATGAAAATTTACGATTCGCATTCCAATGTTAAAAATACGAAG
ATTTGAAGTTCATACTCGTAAAAACGGAAAATTATCTGGGGCCTCAGATT
TTtatcgaaaacgggagcttatcgacTTAAACAGTGTCGAACATATGAAC
GCGAAAAAATGACCTATAAATTTGTTTAATCGAGTTTTACCCATCCTAAA
CTTCactttgttggacctaccccggtggggtggaggtcctataaattaac
ctttgtccgttcgttcgtccgttcgttcgttcgttattagctttcatcgt
gattggctcattagttttttctgattttttgcacaaagatgtgtaactat
aaaccctcgaatgtgacggagcccgattttcgaaaaaaaaatttttgggc
aaatttgggccaaaaaacggctaaaaaatgggttttttggactttttctg
aatttttgcatgaaagtagagtactatcataggtaaaagatggctcaagc
agattttttcaaaaaaattttgttggctcaaaagacgcatgtttatctat
aagaatcactattagtAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaaaacgca
tgtttatctataagaatcactattagtaagcatacatcaatgttcttagt
taaattactcattttttttatgagatagatgttttatttactcacgaagt
cttgactatgaaagaatatttcaagagcatgaaattttggtttcaaacgt
tttttttataagaaacaaacgcctaattttaatagatcgtcactatttgt
gttctgaatgattgtttaatggtcacgctcacgtagatatcaattatata
atatgtgttaaatgcacaatcaggtaggtccataaaagtatcacttgtta
tatTTGGTTCTTTGATTTGAATTCGGGAAAGTCTTAAGTCACTATAATAA
TTTCAGTGGTGATTGGAACATTCAACTCTTggcttttgaattttagaatc
ATGTCAGAAGGCGCTGGTAACAAGCAATGGAGTCCCTGAAATCATCAACA
TAATGTCTAAGAAGCAGGTAAGTTATCCAGTGGTAATTAcatatcttata
caaaacactaCATAGAGCATCTTTTTATCTTAAGCCTCAGGCAGGTGAAA
TATCATGATGCGCCATCTCGGCTAAAAATAAATCACGCACATTTTAGTGC
CGGCAATTTGTtctattaaaacaaaaaaaattagcacTGTTGGAAACAAG
GAGGTGAAACAATGGTCTAGGACAATTTTTTGGCATCGAATTTTGGTCTA
CTTTAAAGATGACATATTTTTGCTTCGAAAAGGGCCGTAGAAGCTCAAGT
TTGGGCTAATAAAACCCATCTCTGTTTACCTGACTGGATCGGAGATCTCA
TCTAACAGAATTGTTTCTCGTCTTATAATCAAAGTTTGAAAACAGAAAGT
TAAACAGAAATAGAAAACATTATTTGCGGATTTTTCCCGTGTAGCGGATA
ATACCTTAAGTGTATCTGGTATTTAATATGGCGGATGAtgaaagaattta
aaaattatggcgactatttaatttggcggattttatcaaaaacttccaaa
tccgccaaatttaatccccgctaAAATTAACACACTTTAAGGTAACATAT
TTTGAGTAGTAAATGTAAAATTGCAATTCTTTCGTTCACAATATTCCAGG
ATGACATGATTTCAAAGATCGGGACATCCATTCTACAACAATGTGTCAAA
TATCAAGACGGTAGGTATTTGGAAGACCTTGATAACATTGACAATGAAAT
GACCAATAAAATGTTTATCTATAGAACAATATATCTCTAATAATATCTCT
TGCTCTTTTTAAATGAAATCTTCTGAAAGAACTGGATCAGTTAATTATAA
AAACAGGGGGGTTAACTTTCCTAAATCATCTATAATGTTGAGGTGCGTGG
AATTGAAACTGAAATGTTGCAGAATCCTTCTAGAAAATCATGACAAATTG
ATTGTAGAAGTGGTGTTATAAGTAAAAGAAGGACTTCTAATATGCGCAAA
AGTTGATACTGaagatttattaaaaattcgCTTGTGTGCAAAAATTGATA
CGAACGAAAGCCGGCACCTTATTCTACACCTTGGTTAAGacaataggcct
tttcataaattattttgagtgtaaCAAATGACTCGTTTTGAAGTGATCAA
GTTTTAAATAAATAGAGTAaacttcttatgaactcctctgggaatcaaac
accatatcaatattttgagaacgaggtaagcgttgtttgtgacgtaattt
atgaaaaggttttttctttcttgtaatACAGATTTAGATGACTGTGTTAA
GAGTGGACAAAAACAAGTCATCGAAAAAGATGACATTCAAATGGAAAACA
CAAACCACAgcaaattgaaaaagaatgtacgTCGTGCCAAACGGTCATTA
CCAATGAACGATATCTGCCAATCCATCAACGATCAAAAAGCTACCAATAC
TGTCACCAATGTCGACAGCAAAGATAATACAGAGATGATCGACATGCTCA
AATCACAGCATGATTTATtacaaaaatttcaagatgAAATTAAAAACCTT
CGAGCAGAAGTTCGAAGCCAAGCAGCCTCCGAATGCGGCTTTGATCAACA
AGCAACTATGACACCGTCTAGAGGACGAACGCAGATGCATTATTACGCGA
CACCATCTCGTAGGTTGTATCCTAGACTATGCCCGGATACAGCGCCCAGT
AAACGCCAATGTCTTGACGCCCCATCTGCTTCGTGGACACCTCAAAGGTA
GAATCTTTTGCTGTTTTCTTTACCTTAAAACTAAAGCAACTATTGTTTAG
TATTCTTTGAAACTCACCAGAATAAGATTTTGCAAGGTTGGAGTACTTTA
GGAAAAAAGCAGTTTGTGAATGCATGAATATTTTTTGGGAGCAGAAATTT
GAAGTCACTGTTATTCTAGTTGTGGAAATTTATAcaataacatttttttg
ctaTTACCTAGGTATGATATGAGGTGTTTGTTTCTTTCCTTTCTCTAGCA
CTGCTGTACAGAATACATGTtccaatgtttcagttaaacattttttttgc
gcATTCAATGATCAAATCTTCGATTTTCTAGTAGTATTTTTCACTcagat
attttcaaataattgttATTTTTGGTTGGTTTTCAAGGCATGACATGAGC
AGATTGACACACGGTTCCACAACACCATCAGTCCAAATGTTAGACAAAAC
ACCTCAACGAAAATATCCTGATGAAGGAGACGATGATGTCGATGAAAGAc
ctgctttaaaaaaaaagacgcATTCCTCGACATTTTGTGAAGAGGAATCT
ACACCTTCCTCATCATTTATGATGAAACAGCAATCCCTCTTTGAGAAAGT
TCAGCTCTGGCAAAAGCAGAACGAACACAATCTCAATGCGCCATTACCAC
AAATTGATAAGGATGGGTTTGTCATGCCCACACCTATGGTTCGAATGATT
AAAGTTAAAGAGAACTTTATGTTCAAAACTCCAATGGTAAGAGTTAACCT
AATGCTTGAATCTggtttaaacatttaaaaaatttcagattcgattgatc
gattcttttattttgtttgtacgTGGATAGCCCGCAAATCGAGGTCTTTT
AGGCAAATTCCACGACCAGCCGACTCGGCGCTGGCGCCTTAAACCACTCT
GCTATCGCTCATCTTTGAAGGTCATCGATTGAAATCGAAATATTTGATgc
tgttcaacttttttttcatttctgtcgTTGCTTGACTTATTCGACGTTGA
TTTAGCCGTAAAACCAAATACAGTAGGGATATTTTCACCACCTACCTTTC
TGTAATAGGTGAATGGCCAGAAAATGCAGCCTACTATCCAATGTGCACCA
AAGAAGAAAGANAGCAGAAATTTGAAGTCACTGTTATTCTAGTTGTGGAA
ATTTATAcaataacatttttttgctaTTACCTAGGTATGATATGAGGTGT
TTGTTTCTTTCCTTTCTCTAGCACTGCTGTACAGAATACATGTttcaatg
tttcagttaaactttttttttgcgcATTCAATATGATCAAGTCTTCGATT
TTCTAGTAGTATTTTTCACTcagatattttcaaataattgttATTTTTGG
TTGGTTTTCAAGGCATGACATGAGCAGATTGACACACGGTTCCACAACAC
CATCAGTCCAAATGTTAGACAAAACACCTCAACGAAAATATCCTGATGAA
GGAGACGATGATGTCGATGAAAGACCTGCTTTAAAGAAAAAGACGCATTC
CTCGACATTTTGTGAAGAGGAATCTACACCTTCCTCATCATTTATGATGA
AACAGCAATCCCTCTTTGAGAAAGTTCAGCTCTGGCAAAAGCAGAACGAA
CACAATCTCAATGCGCCATTACCACAAATTGATAAGGATGGGTTTGTCAT
GCCCACACCTATGGTTCGAATGATTAAAGTTAAAGAGAACTTTATGTTCA
AAACTCCAATGGTAAGAGTTAACCTAATGCTTGAATCTggtttaaacatt
taaaaaatttcagattcgattgatcgattcttttattttgtttgtacgTG
GATAGCCCGCAAATCGAGGTCTTTTAGGCAAATTCCACGACCAGCCGACT
CGGCGCTGGCGCCTTAAACCACTCTGCTATCGCTCATCTTTGAAGGTCAT
CGATTGAAATCGAAATATTTGATgctgttcaacttttttttcatttctgt
cgTTGCTTGACTTATTCGACGTTGATTTAGCCGTAAAACCAAATACAGTA
GGGATATTTTCACCACCTACCTTTCTGTAATAGGTGAATGGCCAGAAAAT
GCAGCCTACTATCCAATGTGCACcaaagaagaaagaagcaaCCAAGAAAC
GATGTCCTACAAGCTCTGATGAAGGATTTTATGATCAGAATGGAGAAGGT
ACTATTTTGATTTACTTTACTTTTGATTAGAGAATTTCTAGTCTATAGCA
TTCTAAACAATTTTGATTGGAAATCGGTAACTAACCTCATCTAGTAATAA
ACTAATGAAGTAGTGTTGTATAATCCTATTGAATAGCTCGTTTACGCTGT
TTATTGGAATTGATCTTTTTTTCCGAGAAAATCTTTTACAAGACAGTGAT
TGATGTGTTGTAAAGGACCCAGTGAATAGAAAATCTAAGTTTCTAGGTAA
tggataaaaaaattaaaaaggccggtctccacttgcgcgcgctgcgatcg
cactttttggtttctatcctttttgcttggaaaaaagattacggcATAAA
AATGTAGTGCGCGCTAGATAAAAAGGTTGAACACATTTGAACTTTTTTCA
CCCGTTGCGTCAGATCGCACCAATGgagttgtttcatttttctttcggcc
aatagcgtggaagctttgctcgaaaaagtggagaccggccttaattcTTC
TTCTTCTGGTCTCAATTAATTTTCATGGTCGTATTGTAATTTTCAGGTGA
CAGCTCTGGGGATATTGTGTCTGGCATTCGCCGTACATTATCGTTCGATC
ATTCGCGAAACAAGGACGAGGCATCGGTTATCTGCCACGATGAGCAAAAA
GCACCCGTCACATCTGTCAGTAATACTGCAACAAACATCAATAAATCATG
TGTAGCCTGTCGACCTGATTTATCATTGAACAGTAAAAATTTGATGCAAT
TTCTAGAGCAGAATCAATTCACATGTCGCACTCATTtcgaatttttaaag
aaaattcaaaaattgtacGACTCGGTTAAACGAAAGGAACGACCTGCTCC
AGTTCTCAATAATGCAATAACGAAGATTCTATCgcaaccaacctttccaa
tgaAAACTCCAAAGAAAAGACTGGACACCACAAATACAGATTGGGAAAAC
ACGTCTGTGTTCAGTTATCGATCGATTGCCTCTAGAAGAAGTCATGCTTC
TGAGAGATCGGTATGTGATTTTTTCTACATTGGCGTGTAAGGTGAACTAA
ATTTCTGGCAAAATGCTCGaaaaaaattatagagctttcttcgtttcaga
tttttttccaaaacaaaatgttaaaattccATAGCTCAGAGTTTCATGTA
CTTCGTACAATCATCAGTTACATGTTACTAAAGATTTACACTATTTTCTG
CCCTTTGAGTGTGGTCGGGCATGGTCGATGACTTTTCATGACAGATTTGA
GTGATTCTCTTACATTCGCGAATGAATTTCGCAGGGTCACGTGGTCAAAA
TATTTATAACACCTGACATGAATTTCGCAGTCTCACgtggtcaaaatata
tttcaaaatttataacacCTGACTTGAGAAACATTGGAGCATACGATAAA
AATTAcctcacttttttcaaattaaattaaCGTCAACTAAGCAAAGTTAA
TTAACGTGaacgaaaaaattcaaaacctttgaaaatatatatCATTTCTT
TTGCAATATTGTAGGACGTGACGTACCGTACAAATATGATGACTCCCTCC
CGACGGCGACAACGCAAAGAATATACCGCAGAAGAAGTCAACTATATCAT
TGACGGTAAGTTCTTTTAACTATAAAAGATGCGGATAGCAATTTTCAACC
GGATTGATAAaaccttttcaaccgtagtcgcgcggACTGGCGCGTGCCAT
TTGATTACTTAATTATCCCCTAAATTAGATCCAATCTTTTGTTGACACCT
TTTTCTCTTGTATTTATGTGGGGAAAAACTGATACGAGTTTAGGGTGATA
AGATTTTTTCAGCGGATGCAGATCTGAATTAACGGCTACAGACATAATct
agcggccgaagacctgaattaacggccgaagacctggagAAAATGAATTG
AGTGGAAATTTGTTGTAAATCCTTTTTATGAATTTAATTGAGAATtgatt
aaatttgatatttcaatagaaatagtgttgaaaaaaaaatttaaaagtta
aaagttttaaaactaaaaacagTGAAAATTAATGCCAATACCTCGTATCG
AACTACCCACCTTTCTGAACCATCGCAACTGATGCTATGCTGAGTGGCGC
AGGCTAGTTTTTCTGACACTAACTTATTTATCAGGTATTCGGTCGGTGAC
ttgctaaatcaggtcttcgaCCGTTAATTCTGGTGTTCGGtcgttaattc
aggtcttcgacCGTTAATTCTGGTGTTCGGtcgttaattcaggtcttcag
CTGTTACCTCAAGTCTTCTGCCGTTATTTCAGGTCTTCGACGGCTAAATA
CGGCCCGCGTCCGCTGACGGAAAAAATTTGCAATGGTCCTATCTCCAAAG
ATTAAAAACAAACGAATCGATCTCTTAAAAAAACGTTGCTAAAAATTGTC
ATTAGTTCCCGTTGAGAAACAAGGCACAATCGAATAAAGTAGCAGTACTT
GTTTTCTCCAAAATATTGTCAACCCTATTAGCACAATAAGAAAAATGTGT
CAGAGATCGTCCTGTCCAAATTTTGTAAACTGAGACTTTTGGCTATTGTT
GAATGCACACTTTTTTATAGGGACACACATAGAAAATACAGATTAAAGCC
TCTTTTAAACCTTTAAAATTGAATACGAAAGAGCGTTTAGCCTAAAAGTT
TCGGATAAATGATGATTGCCGAGGctgagcaaaaatttaattctcaTAAC
CTAAGGTTTGACAAATGCATCTGTTgctcactttttttataagcaacgcC
AATTTTCGGCACAGAGCTGGAGTTGCTAAGGATTTTCCGGACTTCAGCCA
AAACGTTGCTTATggattttgggccaaaaaaataCCTAGTAACTTTAAAA
TTGTTGgctttttatctcattttttgtccaaaatacCTCAAATTTGGTAT
TCAAATACCATCGGTACACATTTTAATAATGTCGGAGATGCctcttttat
tgttttatagGTATTTTTGGTTGCTATTCTTGTTGTACAAATATATTTAT
CTTCTATTTAGGTGCTGAGAGATACGGACGTCGTTGGAAAATGGTTCTTG
ATGCTTACCCATTCCAAAATGGTCGAACTGCAATCGATCtcaaagataaa
tacaaaaagcTCAAGGTATATTTTTTTGCTATTATTAAGAAATATGACGT
TTACAAAAAACTAAACAGTGTCTTTGATACTTTGCTATACAGTGGAGCTC
CCCCCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAaa
caaagttgaaggaagttctacttttttcatccgttacgtcaatttcgacc
aatggaattgcttcatttttcaaccgaccaatgaccttacaaagaCGTCT
agaagttttcgctcatgtcgcgcgaaagtggagaccggctttaacgggga
acacaaattagtttgatttaaagaaattttgagttattgcGTAAGGTTTA
TAAAGCGTTGTTATTTGAAGGGATCATAAAACTTGTTCAATTTTACTTTA
GaagatattcgagttatagaggtttgagttaaGAAGACTCCATTGTATTC
GATTCCTACTTTTCTCTCAAATAAACCAATAGTTAAGTTTGTGTTAAATC
TGTCTGTTTGATTCAGTGCGTCCTTTTGtgtattttaaaaatcttctgtA
TTTAGATATACGGCACACAGCCAACACCAAGCCGACCAGTACCTTTCACA
ACACAAGAATTGGTGAACCTCAAACACGGTGTTTCCAAATTTGGTCAACA
ATGGCCTCGTATTTTGAAAGGGTATAATTTTGAGGAATGTCGCACACCAT
ATGATTTGCAAATGAAATGGGCCACTCTCATGAAAAATGTTTAAGAGTGG
TGGTGGTATTTAATGACCTTTGAAATTCCTTTGTTAGAGATGCTATATGA
TTTAGACTGGTCTAGATCTAAGCTATATTTCCAGATTTTCAATACTTGTT
TTCGCTATgcagaaatttgaattatttcttGCATTACACATGTCTCCTTT
CTACAGTATCACCTTGACAACAGAGGGTGCAATTGTACAACTAGAAACAC
CTTCGAGGTAAACCAGAAAATGGTTTTGAAGGGGTACCCGATTTTAATTC
CACTCATACTCAAAAATTATTGCAGGAGCCGAAGAAGGGCCCCAAAAACA
ATTAAAGGGGATCAAATTAAACCAATTAATAGCCAAAAGTGATCATATCG
ACAAATAGGATGTCTAAAAGTaaaccattttgttgtttttaccttccaag
gTAATATTCTGCGTACTTTTCCGGgatatttttgctgttttttacCGGAT
ATGGAAAGTACTTCGTGTTCAAGTAAAAGGCTTCGGCATTTTCTGATATC
CAGATTTTTAGCTTTCTGGGTCCTTGTTTTGTTTACCTTTGGAAAGAGAC
CAGTAGAATGTTCTGCGATTGGAATCTCAGGTataaccatggaggtataa
agaaaaactggAGTTAAATTTGttggtaattggtcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011349TCONS_00011349Clytia hemisphaericatranscript
TCONS_00011350TCONS_00011350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011349-proteinTCONS_00011349-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:269278..279863 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.63	2.34	0.68	0.25	3.81	2.87	3.39	2.73	1.43	1.92	1.8	1.32	0.51	0.55	1.15	1	0.98	0.95	0.66	0.37	0.57	0.49	0.9	1.14	40.43	28.21	0.16	0.1	0.73	0.6