XLOC_006274 (gene) - C. hemisphaerica

Overview
NameXLOC_006274
Unique NameXLOC_006274
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:366934..370454+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006274 ID=XLOC_006274|Name=XLOC_006274|organism=Clytia hemisphaerica|type=gene|length=3521bp|location=Sequence derived from alignment at sc0000122:366934..370454+ (Clytia hemisphaerica)
CATTCAtttatcaaaccaatcgaaatttttcattttgaaacatAAGGCGA
ACCACAttctacaaaaatgaaaaatctgtCAACTTCACTCTGCTGGAGAT
ACAATTACGGTGTTTGTTCGAATTTTCACCATAATgttctcatcaaaaaa
tattcttataaaaaaatgtttataacACTAAAGTAGCATGTAACTCAATC
ATTGAAGGGGTTAACTCTAGTTTAAACTATAACGTATTCAAAACCCACCA
ATGAAATTCAAGAACTTTGCTTAGTttatatttcaactttttctgaCCAC
GTAGTCAGTATCGAATGACACCTATGATCACTATAAAAGAGGTTTAAAAT
AAGATGGCAAACCATTCAACACATTCGAAACATCAAAGTCAATTTGAAGC
AACAAACTAGTAACGAAGAACAAAGAAGCCAACATGAAGGGAACTTTCAT
AGCACTTGTGGTCATACTGAGCGTGGCAACGTTCTGCAGTTGTGTTAAAC
TCAGGTGAGTTTAGGCTGTGTTTACCATCTTTTCACATAATACTATCCtt
ggtttgaaaatattttaaatttcgtCCCCAATGGACAAAGGTAAactttt
tttatccttttttttatatttgctcAAAAACTACCAccgttttttattta
ttttattagaTTCTATACCCCTTTCCTCTGTGCCACAGTAGGTGTCAAAA
ACCTACTTGACACTTTTGACAATTCCATGCATTAAGAAattagaaagttt
taaaatgttgtaaaggaaaattaGATATAAGACTTCTGCCACCGTGCTTC
TGCTAAGATTTAAGAATTCTATTTTCATTATACTCAGAAATCGGAAAACC
TCCATTAAAAATATCAGAAGAATTGCAGCTGCTCCACCCAAAAAACAAGA
CCTAGAAGAATTGGTTTTAATAGGTGTCAAAAATTACAATGATCTGATTG
TCAACTTGCATAATGGGGCTAAAAAGCTGGAGATTATCGAGAAGCTCACA
AACGTAGCAAAATCCTTGAATAAATTGAACATCGGACTCGACAAGGAACA
ACATCATGCAGTACAGGTTATTCTACGAGTCCACAGAGAATCGGAGTTCG
CTTTAGATCGTGCAAGAGTTGTCATTTCTAAACTGAAGAGTCTCTGTGGT
GGTTTGATCTTGATTCTTGGTGAGGGTCGATCAGATGATGATATCAAGTT
CGCTATTGAAGTTTTCATGGAAGAAGCAAAAGAAATGGAGAAACCTATCC
AAGAAGCAATGGATTATATGACAGCAGCTATCACTAGTGCTGCTACAGGT
ATGTGAGATTACTATATAGttgactctctttaattcgaatttcAAGTGGA
ATAGAATTTTCCTCGAATAAGGGAGCGCATCGAATAGTAAGAACATGTCG
TTtctgagagtttcttgttgacggtgattTTCAATactatcgaataatgg
agcgtatcgaatagtaaaaCGTTGTATAAGAGAGTGTCAATTGTATCTTG
AatttctccttaactcgaacaaattttctaGTCTTCTCAGTTAAACAAAC
CCTTGTAAATTTTCCATGATTTGACTTGAACAAATTTCAATTCTCCATCT
TTATTCGAGCTATCATTAGAAGTAAATATATAGGGTTGGGGTACCTTTTT
AGTTCAATACATCACTAATTTAGCGAATGAGGTATAAGTGGTATAAGTAT
ATTGGAGATGAGAGTAGCAGGACTGGCATAAAACATCTCTTTCGCTCTCA
GTTTTCGAGAAAGCTTTCAGATAAACGTTTTGATCTTTGAATTAGTGTAT
ACTTacttttgattaattttgtTAAGGGTTATATAGGTGGTATGACTAAA
AAAATGTAATCTCCTTAAATAATTTTAATCAGCTTGTAAAAATTCTTACT
AAAATTTGTTATCTTCTTTTTCAGTCGAAGGTGAAATGCTCAAACTGAAA
TCGTGGGTTAGTAAAAAGAAATCTATAGCCGTATCAAATGAGAAGGAGAT
CATCAAAGCGGTACGAGGTGGAGCTTATGGTGGTGCTGGTAAGTTATTGA
TGGCTATCATTCATCAAATATCGATTCTGCCTTTTTTTTAAGTCTGAGAA
CTTTGAAACGCGCCAGTTCAATAAAGTGTTTTCCACCATTCAATGATACC
TACAATCGTTTCTTGACACTCTGAAGCTttactacaatcagtgccaaaat
acttggcacaaaagggaaattccccacgaaattttataaccacaaacaac
TTGGAACTTACAACGTAGGTAGAGTTtctaactctgagttttaacgctaa
actcaagacttaggaccttaggatctgaggatccgaaagttcaaaaatag
tccggtagggcttgaaatatagcctccctcccagatcgaaatattcgatg
aaaccAGGTTGgaggcccgaaattgacattctcgctcgaacttcaatttt
cgaaaaatggtagaATAGCCAAAATTgacaatatgttatggcacacTGAT
TGTAACAACGTTATGCAAAATTTTATAATCATAGGTCAGAGGTCAGGTTA
GGATGGTTAGGATGGTTaggttttgccttttttaaggcATGTCTTACAGT
CCAGtgaaaaccctgtaaaatctcaaaatcttaTAATTAGCATAATTTTT
CGGTACAGTCATCCAATTGAgtcatcaaattaaaaaaaatacaatctcGC
TCCCAAGGCTACTTGTGGACTCGTTTGTGGAAactatcagaatcatcaat
agtaaactaagggactgggttcgacTTCATTAACCTCCTTCTTGTTCTGT
TTAGCGGTATGTTTATTAACATTGGTTAAACCGATCCTGGCTGTCATTGT
TTGTCCTATAACGTATGGGGTTGTATCAGGCGTCATTGAAGGTCACACTA
TCAAACAAATCGAAAAAGGATTCGATAAAACAATCGAGGAAATCGAAAAG
ATGAGTAAAGATATCAAAGCTATTGGGACCAGTACAACCGCCTTGGTGCA
GAAAGTGAAAGTCCACAAAGACAAAGTCAGCGATATCCGAATGACTTTAC
ATGACACCCTCAACCGTGGAAAAATCGTCGGCTACAGATTTAAAGTACGC
TTTTACAACgagttcaaaaagtttttgaatttgttgTATAAGAAATGTGA
AAGTTATCtccaaagcaaaaagtaattttCTCATTATGTAAAATTTCAAC
AATAAAACTATTGCGTATTCATAATTTTTGACAATATATTAGACTTTTTA
TAatatactatatatataattCATATCTATCTTATATGTAATCATTGTCA
TACTTCACTGTCTCCAAGTCTGAATGATCTCAAGAACGGCTTATCTCAAA
TATACATAAACTCAGTAACTAATGTTGCTGGTGAAAAAGATTCTAAAGCT
Attcaattaatttcaaaatttcctgattttgattttgatatgagctatat
atatatatatacattgaaaataaaaaagctatcaGAGGCCgcagttttca
aagaaaatatcaacctctgac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011200TCONS_00011200Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011200-proteinTCONS_00011200-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:366934..370454 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0.03	0.1	0.15	0.14	117.72	116.67	323.44	526.45	239.99	134.38	1.12	1.81	0.17	0.14	22.19	18.54	0.52	0.25	311.98	295.75	10.66	14.8	94.59	149.5	19.59	21.62	56.5	35.24