XLOC_006267 (gene) - C. hemisphaerica

Overview
NameXLOC_006267
Unique NameXLOC_006267
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:161796..169302+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006267 ID=XLOC_006267|Name=XLOC_006267|organism=Clytia hemisphaerica|type=gene|length=7507bp|location=Sequence derived from alignment at sc0000122:161796..169302+ (Clytia hemisphaerica)
aaataatcatcagcctaccttgaaactttttgcaaagtttcaaagcaatt ggtcaactgattgactagatacagcaaattatatcatccctggaatggca ttttccttaacaaatccttacaaagggtaaaaagtaccccctaaacccGG GCCCAGTATggaaaattgaccaggagttagctttggggaccgaccatttc caaaactaggatagttgaggattccaaaaatgtatagtttatcctgtaga atcttgggttaagcaaaagtgcttatttaaggagatataggatttggctc ccggactatagCGTTTGCTACTTGATCGTTGACGCTCTCcaattggattt tcattgaataagggTGCGAATtcgagagcgtcaactgtatttcgggttca ttttcttctctttgTCATAGAAATATAGACAAACAAGCTTAAAATAAACA GTACCATAATCAAACGAAATGGGTGCATCAGATATTCTTGGACAAGTCAC AAAGGACGGTAGCAGCGGTTTCAAAGCGGAAAAAGATCGATATCATTTAT ACACGGCCCATGGGTGCCCTTTTGCTCACAGGTAAGGAATTCACATTTCT AAAATTACAACAACAATTTTATCGGTATATACaccaaactcgaacccagt cccttagttcacTTGATCTTGATTGCTTTCACAGTCGTTTCGGTATCACA CTAAAGAAATGATTTATTACTGCGGTATGCCTAAAGTGTGTCTAAACAGC CTCCTGTGTACAAACGCGATAAATAGTATAGACTTTAGTCTGGATCGcaa acctctacaaaacccaAGGTattataaggagcacgaatccgttagtggat gccagcagcctatatAGACTTCTGATATTTCAAATTTGTCGcgatttttt gagaaacaaCAACAGgaaattaagcaaaaaaagaaCAGTTGAAGCTGGGT TCACTGGACTCTATCCACCAGGGTTCACCAATCATTCTGATGACTTTGGG AACGATTTGAAATTCAGTaccatttttttcttcagggCAGTGATTGGACG TAAGTTGAAAGGTTTGGAAGACGTCATCACCATGAGTTTTGttgaaagtg tcaaaaaagATGCAACAAAAAGTTACCATTTTTCAACGGAATTACCCGAT CCTATTAACGGAAAGGAGTTCCTTATGGATGTTTACTTGCACTCGCATCC CGAATACAGCGGAAGTGCCACTGTTCCGGTTCTTTTTGATAAACAAACAC AAAAGATCGTTTCGAATAGTTCTGCAGACATTTTAAGAATGCTTGATCAA GAATTTAATGAACTCTCGAAGACGGGGGTGAATTTATATCCAGAAGATTT GAGAAAAGATATTGATGAGTTGAATGATTGGATCACTCAGTAAGTCTTTT TTAATacgtctttttttataagaacatccaaattttttgaagtcttcaaa tgttcttagcatgtttttattttcaccattttttgagcaattttgtccat tttcctaagaaattgggtgttttagagtcccaaaagccttaaaatgttgt taacttcttcttaacattttgaccatcaaagccttgtgttcttataaaaa taacgtgTACAAGGTTTACTAGGTGGGTAAGTCACAATTCTAAAATCGAC CCTCTGTGAGAGGCCAGGCCAATCTTATATTATGCTGatgtaagcaaaaa atgtttttcttttcctccttctgaccaatcttgctccacatccgtgatca atccaatgtgaaaaagttaaaagtgacgagtaagcaaacgatatcactct tatttaaaaacaaaacctttaagtttcGTTTCAAGGTCGTGTATTTAATC ATGTTCtcttattttctattttgttcttTCCGCAGAGGCATAGTGACGGC AGTATACCGTGTAGGGAGAGGTTATTTGGGAAAGAATCAAGAAATGTATG ATACAGAAGTTGCAGCCTtgtttcaaaacattgataagGTATGTCTTTAT AGTTATAAAATACTATACTGAACATCTTCTGCAACCAGGTTGCACTGTGT TGGATTCACCACAAATGACCATCACGAGACATAGAATTAGCTAATGTAGG TTCTCAGTTACGGAAGATGTCTGTACACGGACCCAGTAtctacagctaat ttcaaaattcattgccgtagagggtctgttgtcattgtcttttctcatac gagatttttcaaaccaaccgcttcgatggagtgttggtgagagggGGACG GTTAGAGAAGTgtttctatttataaatcatacttcattgcAGAGggctcc gtacgggaattttttcatcaaactgACAATGCgaacagagtgtactacga agcgatacacgtgagatacactctggtacataGTATTACAGAAGTGGTTA GTTGATGGATTGATATTGAACATAAGTAGACTTCTGGTTATTGGAGCTCC Tgtatacagtaaaacctctaattaacggacactctaaaaggcggacacct ctgattagcggacaatttcattttccccggccgtttcctagtcaaatcct cataaaaacgtttctaaaaggcggacactcaattagcggtccctctgatt agcggacaatttcattctccccggccgtttcctagtcaaatcctcataaa aacgtttctaaaaggcggacactcaattagcggaccctctgattagcgga caatttttttcgcacgaaatggcgAAAACCCCTAtattagctctccaatt agcggaaattgaatatcaaacgggtcacaggcgtccaaacttgaaaaaaa atttttagatatttttatttcaagcacttactTATTAGTCTTactattca aattatttctacaaatttccagttttcccttgacccgTTCAACGAATttt aggtgggccaaagaaatcataaatcactggtacttcaagtccgtacccac cacctcgatttaacctattgccagtcactcgagctcttctatggcctagt gtctgcaaataagtactttagaccccaattttgtattttcgacatcctgg gatggcctaatttcaaagttggagctccgagatcaaaagtttctaaaagg cggacactaacccctttccccgatggtgtccgctaattcgAGGTTCCACT GTATGATATTCGAACTAAGGTAACGATAATATCCGGGGAGATTCTGATTA CTCCGCGCTGGACACGCATTCACTCACAAAAGGTCATGTAAGAGAATATG ATCAGGTTTGTGCACAGCTTTGATCTTCCAAAGATTTGGGATGAATGTTG TTGAGATTGGATAATTTAAAATAATCGCACCAAACATGATTATTAGAAGC AATTcgctttcactttcattttaaagccaaaatcaactcgattttgattg ttttagcTGAATAATTAGGCCCGGTCGTAAAGCAGAGCGTGGTGTGCGCA GGCGCAGAATAGATGATCTGTTATGAAATTAGCCTAAGGGCTATGAATAA ATGCTCGAAAATTATGATTAGTTTTTGGAGACATTTTTAGGCATTGTTCT GTCATCAGATAATTAGTCATCCATCCATTCTTTATAGGTTGAAGAAATAT TGCAGAGTAAGCGTTATTTGGCAGGTTCACAAATCACGGAAGCAGACGTT CGTTTGATGGTCGTTTTATTACGTTTTGATACAATCTATTATTCCCTATA CAaggtacacatttttttcataagcaattacaattttcgggtcaggacTG GGGTTGTTAAGCATTATAGCTCATTTTCTAacaaatttgctttgaccatT CCTGATATTATATCATTTTTATGCTTATTTGGACAAGGGCTATCGTCTGC CATGGTTAGAATATCTAAAAAGCTTTCACTTTACAAGAGAGCGAAAGAAA ATTGGCTAATTTGAGCTCTCGTGTCTTGGCAACCTGGTTGCTTGTTCAAA AGAATGTAAAGAAAAGTCAGCAAAGATACCCTACAACTACGTTCCCCGAT GGGAAATTCCACTATGAAAGGCGCGAAATGACTTTAGAATAATCGTTATC TTTTTTGAGTTATTTGTgaattcataaattttgcaataaGAAAAGATTCA TTTGTCCAaaatattgggctcttccagaaaatgttcgtacattgGGGGGT GGGGTGGAGGATAAAGTGTCCGGAGGTAgcgaaaaatctacaaaatttgc cttgtccgggaggtaaacttgctctgtttggggttcattttgctctgttt gaaggtaattttgattgttcatggggtcaactaatgcttgtccgTGGGGT TAGACCTActggggtcaaaagtcacaatatCCGGggagtaaatttccaaa aactgTCATAtgctccaccccccccccatattcaatttttttctggaata accACACTTTTAGCCGATCACTTTCATCGTGGAGGTAACTTAACTTAAAA ATAGTTTTCCtggtgaaatattttatttataatatCAATTGACAACCTGC AGTTAAGTTTAAAAtggcttttgttttgatttttcagtgCTCCAAGCGAA CTTTGGTCTCCTACAAAAACTTATGGGGTTACGTTCGGGACATTTATCAA ACGTTTGATCTTGCACCTATTGTCAATCTTGTTGAAACGAAGATTATGTA TTTCAAAGCCCCTGCGTACTCAACGGTAAGATAATGGTATATCAGTCGTT TGCGGTCTTTCTCGATGTCTTTTTTACATATCGTAAAAACCTTAGACcct aaaaaaagaagaacgtcATTTATAATATGTGTTATACAGTAATATAGGTC AGTAATATAGGTacacccttgtctcacagccccggggaacttttttccta cagcggggataaaaattttgattgaaatctcaatggtgataaaatttcat ttatttcaagGTTAAataatccagtggggatggttttggagtgcaatttc taaataaatgaatttcgaatggggatgaaatcaaagtaaatttctcagtg gggctgaaattctaggatatttttcccactggggacgaaattttccGGTG GGGCTGGggccccagcgggtctgtgagacaggggtgtataggtgttatat gataCTGCGGTTTTGGTGGAATACAGTGTTTTGTCCTTCTAAGGTTGCTT TTATTTGGGATTTGCCTGGCCCTCAATTTTTTACACTCTTTTATCGAAGA ATAAGCTCATAAATTCCCAAAAAAGAGAACAACCCAAGAACAACACTGAG CCTAGAATGACAACGCTTTTAACGAATTAAGGGAATTTTGCCCCACGAAT AAGAACAGGGTAAAAAGAattggggtggaggatatatagGATaatttgtc cgggggtagtgcaaaatttgccttgtttttggggcaattttgaatgtccg ggggggtcatgtcatgttttttttttttttttttttttttttttataaNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccagatcataccgccag gaggaaggaaccccAAATGAGCTTACAAAATGAGCAATAATGActaagaa atgaaaatataaaaagaaaatatatacaaaaagaaaaaaacaacaaaaac taactacagaaaataattgataacaaaaataaaaataaacagaaagagcT AGGAGAGCACTTGGAGCATAAGACTAGAATNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNccccccccccccccccatattcaatttttttctggagaaGC AGTGTACAGTGTGGTATAATGACTGGAGTGGTTAGTACGTCTTAAGTCTG CAAtctattcttgatttttttgttctttataGCTGGACACTGTTGTTCCT GTGGGTCCGGAACTGAATTTCAACGAACCACATGGAAGGGAGATGATCAA ATAAGATTAAGTCTTAGAAAAACCTTATAGGGATTGTACATAGTGAATTT TACAAGTAAATTTATTATTGTGACAGTAAACATTCCATGtcgaaggaaat attttttacacATGGTTATTTTTTATGGCTTTTCTCGGTTTCACGACTTT TCAGTCGGCTCATCGGCAATATTTGTTCCAAAACGGTCAGAATTTCTATA AAGTCAATTTCAGCATGGCTCAAAGTTTGTGGCTTTACACTCAATGGTAT TTATTCCTTGATAGCTATACTTACCATTGGCTAAAGAGTTTATCAAGTTT CTCGAAAAGATTTCCTACTATGTAAAGAAAGTAATTTTTGCGGTAGTTTA ATTTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011186TCONS_00011186Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011186-proteinTCONS_00011186-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:161796..169302 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.83 11.27 7.23 6.15 4.48 3.32 5.2 6.55 11.65 15.9 19.06 9.08 7.72 7.14 10.92 14.72 8.05 8.93 6.78 6.27 7.64 5.83 7.53 7.9 10.33 11.21 6.92 6.22 5.17 5.5